RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 CDC42BPAQ5VT25 1732 aa22.79■■□□□ 1.24
TM9SF1-208ENST00000529332 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
TM9SF1-208ENST00000529332 RIMBP3CA6NJZ7 1639 aa22.73■■□□□ 1.23
TM9SF1-208ENST00000529332 RIMBP3BA6NNM3 1639 aa22.73■■□□□ 1.23
TM9SF1-208ENST00000529332 RIMBP3Q9UFD9 1639 aa22.73■■□□□ 1.23
TM9SF1-208ENST00000529332 PREX2Q70Z35 1606 aa22.72■■□□□ 1.23
TM9SF1-208ENST00000529332 CFDP1Q9UEE9 299 aaPredicted RBP22.72■■□□□ 1.23
TM9SF1-208ENST00000529332 MYO5CQ9NQX4 1742 aa22.7■■□□□ 1.22
TM9SF1-208ENST00000529332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.22
TM9SF1-208ENST00000529332 TTC37Q6PGP7 1564 aa22.7■■□□□ 1.22
TM9SF1-208ENST00000529332 WDR7Q9Y4E6 1490 aa22.7■■□□□ 1.22
TM9SF1-208ENST00000529332 CAMSAP2Q08AD1 1489 aa22.69■■□□□ 1.22
TM9SF1-208ENST00000529332 NPM1P06748 294 aaKnown RBP eCLIP22.69■■□□□ 1.22
TM9SF1-208ENST00000529332 DNMT1P26358 1616 aaKnown RBP22.68■■□□□ 1.22
TM9SF1-208ENST00000529332 SIN3AQ96ST3 1273 aa22.67■■□□□ 1.22
TM9SF1-208ENST00000529332 CDC42BPBQ9Y5S2 1711 aa22.67■■□□□ 1.22
TM9SF1-208ENST00000529332 DNAJC5Q9H3Z4 198 aa22.64■■□□□ 1.21
TM9SF1-208ENST00000529332 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
TM9SF1-208ENST00000529332 ASXL2Q76L83 1435 aa22.63■■□□□ 1.21
TM9SF1-208ENST00000529332 PTPRKQ15262 1439 aa22.62■■□□□ 1.21
TM9SF1-208ENST00000529332 DAPK1P53355 1430 aa22.62■■□□□ 1.21
TM9SF1-208ENST00000529332 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
TM9SF1-208ENST00000529332 ZNF644Q9H582 1327 aaPredicted RBP22.6■■□□□ 1.21
TM9SF1-208ENST00000529332 ZNF777Q9ULD5 760 aaPredicted RBP22.6■■□□□ 1.21
TM9SF1-208ENST00000529332 CROCC2H7BZ55 1655 aa22.6■■□□□ 1.21
TM9SF1-208ENST00000529332 HFM1A2PYH4 1435 aa22.59■■□□□ 1.21
TM9SF1-208ENST00000529332 AKNAQ7Z591 1439 aa22.59■■□□□ 1.21
TM9SF1-208ENST00000529332 GCC2Q8IWJ2 1684 aa22.58■■□□□ 1.21
TM9SF1-208ENST00000529332 ABCA9Q8IUA7 1624 aa22.58■■□□□ 1.2
TM9SF1-208ENST00000529332 ABCC5O15440 1437 aa22.57■■□□□ 1.2
TM9SF1-208ENST00000529332 SAMD9LQ8IVG5 1584 aa22.57■■□□□ 1.2
TM9SF1-208ENST00000529332 ARAP3Q8WWN8 1544 aa22.56■■□□□ 1.2
TM9SF1-208ENST00000529332 ADGBQ8N7X0 1667 aa22.56■■□□□ 1.2
TM9SF1-208ENST00000529332 PLCH2O75038 1416 aa22.55■■□□□ 1.2
TM9SF1-208ENST00000529332 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
TM9SF1-208ENST00000529332 ARHGEF5Q12774 1597 aa22.55■■□□□ 1.2
TM9SF1-208ENST00000529332 TIMELESSQ9UNS1 1208 aa22.54■■□□□ 1.2
TM9SF1-208ENST00000529332 PLEKHH2Q8IVE3 1493 aa22.54■■□□□ 1.2
TM9SF1-208ENST00000529332 ROCK1Q13464 1354 aa22.53■■□□□ 1.2
TM9SF1-208ENST00000529332 NAIPQ13075 1403 aa22.52■■□□□ 1.2
TM9SF1-208ENST00000529332 SHANK2Q9UPX8 1470 aa22.51■■□□□ 1.19
TM9SF1-208ENST00000529332 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
TM9SF1-208ENST00000529332 PPP1R15AO75807 674 aaPredicted RBP22.48■■□□□ 1.19
TM9SF1-208ENST00000529332 EFCAB2Q5VUJ9 269 aa22.48■■□□□ 1.19
TM9SF1-208ENST00000529332 SYCP2Q9BX26 1530 aa22.47■■□□□ 1.19
TM9SF1-208ENST00000529332 ADGRL2O95490 1459 aa22.47■■□□□ 1.19
TM9SF1-208ENST00000529332 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
TM9SF1-208ENST00000529332 KIAA1107Q9UPP5 1409 aa22.47■■□□□ 1.19
TM9SF1-208ENST00000529332 RSPH4AQ5TD94 716 aa22.46■■□□□ 1.19
TM9SF1-208ENST00000529332 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
TM9SF1-208ENST00000529332 DDX10Q13206 875 aaKnown RBP22.45■■□□□ 1.18
TM9SF1-208ENST00000529332 RRP7BPQ9NSQ0 103 aa22.45■■□□□ 1.18
TM9SF1-208ENST00000529332 ABCC1P33527 1531 aa22.44■■□□□ 1.18
TM9SF1-208ENST00000529332 C9orf84Q5VXU9 1444 aa22.43■■□□□ 1.18
TM9SF1-208ENST00000529332 TSPY4P0CV99 314 aa22.42■■□□□ 1.18
TM9SF1-208ENST00000529332 TSPY10P0CW01 314 aa22.42■■□□□ 1.18
TM9SF1-208ENST00000529332 SUPT16HQ9Y5B9 1047 aaKnown RBP22.42■■□□□ 1.18
TM9SF1-208ENST00000529332 ANKRD30AQ9BXX3 1397 aa22.42■■□□□ 1.18
TM9SF1-208ENST00000529332 HNRNPMP52272 730 aaKnown RBP eCLIP22.42■■□□□ 1.18
TM9SF1-208ENST00000529332 CFAP74Q9C0B2 1584 aa22.41■■□□□ 1.18
TM9SF1-208ENST00000529332 FANCAO15360 1455 aa22.41■■□□□ 1.18
TM9SF1-208ENST00000529332 NCOA1Q15788 1441 aa22.4■■□□□ 1.18
TM9SF1-208ENST00000529332 MAST1Q9Y2H9 1570 aa22.4■■□□□ 1.18
TM9SF1-208ENST00000529332 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.17
TM9SF1-208ENST00000529332 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
TM9SF1-208ENST00000529332 TONSLQ96HA7 1378 aa22.35■■□□□ 1.17
TM9SF1-208ENST00000529332 KDM6BO15054 1643 aa22.35■■□□□ 1.17
TM9SF1-208ENST00000529332 GLI2P10070 1586 aa22.35■■□□□ 1.17
TM9SF1-208ENST00000529332 ARHGEF12Q9NZN5 1544 aa22.34■■□□□ 1.17
TM9SF1-208ENST00000529332 MAP3K4Q9Y6R4 1608 aa22.32■■□□□ 1.16
TM9SF1-208ENST00000529332 PLXNC1O60486 1568 aa22.32■■□□□ 1.16
TM9SF1-208ENST00000529332 ADGRL1O94910 1474 aa22.31■■□□□ 1.16
TM9SF1-208ENST00000529332 DIP2BQ9P265 1576 aa22.29■■□□□ 1.16
TM9SF1-208ENST00000529332 KIF15Q9NS87 1388 aa22.29■■□□□ 1.16
TM9SF1-208ENST00000529332 ANKRD50Q9ULJ7 1429 aa22.28■■□□□ 1.16
TM9SF1-208ENST00000529332 TRAPPC8Q9Y2L5 1435 aa22.27■■□□□ 1.16
TM9SF1-208ENST00000529332 NEO1Q92859 1461 aa22.26■■□□□ 1.15
TM9SF1-208ENST00000529332 SCAPERQ9BY12 1400 aa22.25■■□□□ 1.15
TM9SF1-208ENST00000529332 TRIM52Q96A61 297 aa22.25■■□□□ 1.15
TM9SF1-208ENST00000529332 RTEL1-TNFRSF6BF6WH68 1400 aa22.24■■□□□ 1.15
TM9SF1-208ENST00000529332 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
TM9SF1-208ENST00000529332 ZFYVE16Q7Z3T8 1539 aa22.22■■□□□ 1.15
TM9SF1-208ENST00000529332 SPAG9O60271 1321 aaKnown RBP22.22■■□□□ 1.15
TM9SF1-208ENST00000529332 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
TM9SF1-208ENST00000529332 CCER2I3L3R5 266 aa22.21■■□□□ 1.15
TM9SF1-208ENST00000529332 INO80Q9ULG1 1556 aaPredicted RBP22.21■■□□□ 1.15
TM9SF1-208ENST00000529332 ZNF518AQ6AHZ1 1483 aa22.21■■□□□ 1.15
TM9SF1-208ENST00000529332 ANP32CO43423 234 aa22.19■■□□□ 1.14
TM9SF1-208ENST00000529332 ATP7AQ04656 1500 aa22.19■■□□□ 1.14
TM9SF1-208ENST00000529332 FAM69CQ0P6D2 419 aa22.18■■□□□ 1.14
TM9SF1-208ENST00000529332 AFAP1Q8N556 730 aa22.17■■□□□ 1.14
TM9SF1-208ENST00000529332 POGZQ7Z3K3 1410 aa22.16■■□□□ 1.14
TM9SF1-208ENST00000529332 ERBINQ96RT1 1412 aa22.16■■□□□ 1.14
TM9SF1-208ENST00000529332 KIF13AQ9H1H9 1805 aa22.15■■□□□ 1.14
TM9SF1-208ENST00000529332 KDM5CP41229 1560 aa22.14■■□□□ 1.14
TM9SF1-208ENST00000529332 KDM5DQ9BY66 1539 aa22.14■■□□□ 1.14
TM9SF1-208ENST00000529332 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
TM9SF1-208ENST00000529332 TEX14Q8IWB6 1497 aa22.14■■□□□ 1.13
TM9SF1-208ENST00000529332 TSPOAP1O95153 1857 aa22.13■■□□□ 1.13
TM9SF1-208ENST00000529332 UNC13BO14795 1591 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms