RNA–Protein interactions for RNA: ENST00000529173.5

RPS3-212, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-212ENST00000529173 CFDP1Q9UEE9 299 aaPredicted RBP19.24■□□□□ 0.67
RPS3-212ENST00000529173 ABCC10Q5T3U5 1492 aa19.24■□□□□ 0.67
RPS3-212ENST00000529173 CROCC2H7BZ55 1655 aa19.23■□□□□ 0.67
RPS3-212ENST00000529173 UHRF1BP1LA0JNW5 1464 aa19.23■□□□□ 0.67
RPS3-212ENST00000529173 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
RPS3-212ENST00000529173 ABCC5O15440 1437 aa19.22■□□□□ 0.67
RPS3-212ENST00000529173 SHANK2Q9UPX8 1470 aa19.22■□□□□ 0.67
RPS3-212ENST00000529173 ADGRL2O95490 1459 aa19.2■□□□□ 0.66
RPS3-212ENST00000529173 PREX2Q70Z35 1606 aa19.17■□□□□ 0.66
RPS3-212ENST00000529173 ARHGEF5Q12774 1597 aa19.16■□□□□ 0.66
RPS3-212ENST00000529173 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
RPS3-212ENST00000529173 RRP7BPQ9NSQ0 103 aa19.14■□□□□ 0.65
RPS3-212ENST00000529173 CHIC2Q9UKJ5 165 aa19.12■□□□□ 0.65
RPS3-212ENST00000529173 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
RPS3-212ENST00000529173 TONSLQ96HA7 1378 aa19.11■□□□□ 0.65
RPS3-212ENST00000529173 ERCC6L2Q5T890 1561 aa19.11■□□□□ 0.65
RPS3-212ENST00000529173 RSPH4AQ5TD94 716 aa19.11■□□□□ 0.65
RPS3-212ENST00000529173 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
RPS3-212ENST00000529173 NCOA1Q15788 1441 aa19.09■□□□□ 0.65
RPS3-212ENST00000529173 MYO5CQ9NQX4 1742 aa19.09■□□□□ 0.65
RPS3-212ENST00000529173 ZCCHC11Q5TAX3 1644 aaKnown RBP19.08■□□□□ 0.65
RPS3-212ENST00000529173 ZNF644Q9H582 1327 aaPredicted RBP19.07■□□□□ 0.64
RPS3-212ENST00000529173 TRIM52Q96A61 297 aa19.06■□□□□ 0.64
RPS3-212ENST00000529173 CCDC141Q6ZP82 1450 aa19.06■□□□□ 0.64
RPS3-212ENST00000529173 C9orf84Q5VXU9 1444 aa19.06■□□□□ 0.64
RPS3-212ENST00000529173 KDM6BO15054 1643 aa19.05■□□□□ 0.64
RPS3-212ENST00000529173 CDC42BPBQ9Y5S2 1711 aa19.05■□□□□ 0.64
RPS3-212ENST00000529173 NEUROD1Q13562 356 aa19.05■□□□□ 0.64
RPS3-212ENST00000529173 ZNF777Q9ULD5 760 aaPredicted RBP19.05■□□□□ 0.64
RPS3-212ENST00000529173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.04■□□□□ 0.644e-23■□□□□ 10.1
RPS3-212ENST00000529173 ARHGAP5Q13017 1502 aa19.03■□□□□ 0.64
RPS3-212ENST00000529173 TTC37Q6PGP7 1564 aa19.03■□□□□ 0.64
RPS3-212ENST00000529173 SAMD9LQ8IVG5 1584 aa19.03■□□□□ 0.64
RPS3-212ENST00000529173 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
RPS3-212ENST00000529173 TSPY4P0CV99 314 aa19.03■□□□□ 0.64
RPS3-212ENST00000529173 TSPY10P0CW01 314 aa19.03■□□□□ 0.64
RPS3-212ENST00000529173 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.64
RPS3-212ENST00000529173 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
RPS3-212ENST00000529173 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.63
RPS3-212ENST00000529173 MPHOSPH9Q99550 1183 aa19.01■□□□□ 0.63
RPS3-212ENST00000529173 ANKRD50Q9ULJ7 1429 aa18.99■□□□□ 0.63
RPS3-212ENST00000529173 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
RPS3-212ENST00000529173 MBD5Q9P267 1494 aa18.99■□□□□ 0.63
RPS3-212ENST00000529173 KDM5DQ9BY66 1539 aa18.98■□□□□ 0.63
RPS3-212ENST00000529173 DENND4BO75064 1496 aaPredicted RBP18.96■□□□□ 0.63
RPS3-212ENST00000529173 PLXNC1O60486 1568 aa18.95■□□□□ 0.62
RPS3-212ENST00000529173 PLCH2O75038 1416 aa18.95■□□□□ 0.62
RPS3-212ENST00000529173 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
RPS3-212ENST00000529173 KIF15Q9NS87 1388 aa18.93■□□□□ 0.62
RPS3-212ENST00000529173 RPRD2Q5VT52 1461 aaKnown RBP18.93■□□□□ 0.62
RPS3-212ENST00000529173 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
RPS3-212ENST00000529173 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
RPS3-212ENST00000529173 SLC4A1APQ9BWU0 796 aaKnown RBP18.93■□□□□ 0.62
RPS3-212ENST00000529173 PZPP20742 1482 aa18.92■□□□□ 0.62
RPS3-212ENST00000529173 ANKRD30BQ9BXX2 1392 aa18.92■□□□□ 0.62
RPS3-212ENST00000529173 EFCAB2Q5VUJ9 269 aa18.9■□□□□ 0.62
RPS3-212ENST00000529173 ABCC1P33527 1531 aa18.89■□□□□ 0.62
RPS3-212ENST00000529173 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
RPS3-212ENST00000529173 ABCA9Q8IUA7 1624 aa18.87■□□□□ 0.61
RPS3-212ENST00000529173 HNRNPMP52272 730 aaKnown RBP eCLIP18.86■□□□□ 0.612e-6■□□□□ 10
RPS3-212ENST00000529173 DUOX2Q9NRD8 1548 aa18.85■□□□□ 0.61
RPS3-212ENST00000529173 UNC13BO14795 1591 aa18.85■□□□□ 0.61
RPS3-212ENST00000529173 ERBINQ96RT1 1412 aa18.83■□□□□ 0.61
RPS3-212ENST00000529173 NUP155O75694 1391 aa18.82■□□□□ 0.6
RPS3-212ENST00000529173 TEX14Q8IWB6 1497 aa18.82■□□□□ 0.6
RPS3-212ENST00000529173 RTEL1-TNFRSF6BF6WH68 1400 aa18.82■□□□□ 0.6
RPS3-212ENST00000529173 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
RPS3-212ENST00000529173 CFAP74Q9C0B2 1584 aa18.8■□□□□ 0.6
RPS3-212ENST00000529173 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.63e-45■□□□□ 8.2
RPS3-212ENST00000529173 MIER1Q8N108 512 aa18.79■□□□□ 0.6
RPS3-212ENST00000529173 ASXL2Q76L83 1435 aa18.78■□□□□ 0.6
RPS3-212ENST00000529173 ARHGEF12Q9NZN5 1544 aa18.77■□□□□ 0.6
RPS3-212ENST00000529173 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
RPS3-212ENST00000529173 IQGAP3Q86VI3 1631 aa18.76■□□□□ 0.59
RPS3-212ENST00000529173 PKD2Q13563 968 aa18.76■□□□□ 0.59
RPS3-212ENST00000529173 MAGI2Q86UL8 1455 aa18.76■□□□□ 0.59
RPS3-212ENST00000529173 FANCAO15360 1455 aa18.75■□□□□ 0.59
RPS3-212ENST00000529173 L3MBTL2Q969R5 705 aa18.73■□□□□ 0.59
RPS3-212ENST00000529173 ZFYVE16Q7Z3T8 1539 aa18.72■□□□□ 0.59
RPS3-212ENST00000529173 FOXD1Q16676 465 aa18.71■□□□□ 0.59
RPS3-212ENST00000529173 EIF4G2P78344 907 aaKnown RBP eCLIP18.7■□□□□ 0.58
RPS3-212ENST00000529173 SPAG9O60271 1321 aaKnown RBP18.7■□□□□ 0.58
RPS3-212ENST00000529173 INO80Q9ULG1 1556 aaPredicted RBP18.7■□□□□ 0.58
RPS3-212ENST00000529173 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
RPS3-212ENST00000529173 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
RPS3-212ENST00000529173 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
RPS3-212ENST00000529173 ATP7AQ04656 1500 aa18.68■□□□□ 0.58
RPS3-212ENST00000529173 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
RPS3-212ENST00000529173 ATP10AO60312 1499 aa18.64■□□□□ 0.58
RPS3-212ENST00000529173 CCDC144AA2RUR9 1427 aa18.64■□□□□ 0.57
RPS3-212ENST00000529173 DEPDC5O75140 1603 aa18.64■□□□□ 0.57
RPS3-212ENST00000529173 ZNF518AQ6AHZ1 1483 aa18.64■□□□□ 0.57
RPS3-212ENST00000529173 POLR1AO95602 1720 aaPredicted RBP18.61■□□□□ 0.57
RPS3-212ENST00000529173 RALGAPBQ86X10 1494 aa18.61■□□□□ 0.57
RPS3-212ENST00000529173 SCAPERQ9BY12 1400 aa18.61■□□□□ 0.57
RPS3-212ENST00000529173 KANK1Q14678 1352 aa18.61■□□□□ 0.57
RPS3-212ENST00000529173 CD109Q6YHK3 1445 aa18.59■□□□□ 0.57
RPS3-212ENST00000529173 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
RPS3-212ENST00000529173 DDX10Q13206 875 aaKnown RBP18.59■□□□□ 0.57
RPS3-212ENST00000529173 NEO1Q92859 1461 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms