RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 ADGRL1O94910 1474 aa27.76■■■□□ 2.04
USP35-202ENST00000528910 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
USP35-202ENST00000528910 TIAM1Q13009 1591 aa27.75■■■□□ 2.03
USP35-202ENST00000528910 ARHGEF40Q8TER5 1519 aa27.74■■■□□ 2.03
USP35-202ENST00000528910 POGZQ7Z3K3 1410 aa27.72■■■□□ 2.03
USP35-202ENST00000528910 RAPGEF3O95398 923 aa27.7■■■□□ 2.02
USP35-202ENST00000528910 MTUS2Q5JR59 1369 aa27.7■■■□□ 2.02
USP35-202ENST00000528910 ABCC1P33527 1531 aa27.69■■■□□ 2.02
USP35-202ENST00000528910 EFCAB2Q5VUJ9 269 aa27.68■■■□□ 2.02
USP35-202ENST00000528910 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
USP35-202ENST00000528910 SCAPERQ9BY12 1400 aa27.67■■■□□ 2.02
USP35-202ENST00000528910 MAP3K1Q13233 1512 aa27.66■■■□□ 2.02
USP35-202ENST00000528910 KDM5CP41229 1560 aa27.65■■■□□ 2.02
USP35-202ENST00000528910 SUPT6HQ7KZ85 1726 aaKnown RBP27.65■■■□□ 2.02
USP35-202ENST00000528910 GPATCH8Q9UKJ3 1502 aaKnown RBP27.65■■■□□ 2.02
USP35-202ENST00000528910 MAGI2Q86UL8 1455 aa27.64■■■□□ 2.01
USP35-202ENST00000528910 KDM4FA0A1W2PPD8 638 aa27.63■■■□□ 2.01
USP35-202ENST00000528910 SAMD9LQ8IVG5 1584 aa27.63■■■□□ 2.01
USP35-202ENST00000528910 ZFYVE16Q7Z3T8 1539 aa27.62■■■□□ 2.01
USP35-202ENST00000528910 ZNF518AQ6AHZ1 1483 aa27.62■■■□□ 2.01
USP35-202ENST00000528910 ARHGEF12Q9NZN5 1544 aa27.57■■■□□ 2
USP35-202ENST00000528910 HECW2Q9P2P5 1572 aa27.57■■■□□ 2
USP35-202ENST00000528910 LRRC9Q6ZRR7 1453 aa27.57■■■□□ 2
USP35-202ENST00000528910 CCNB3Q8WWL7 1395 aa27.55■■■□□ 2
USP35-202ENST00000528910 NCOA2Q15596 1464 aa27.55■■■□□ 2
USP35-202ENST00000528910 YEATS2Q9ULM3 1422 aa27.54■■■□□ 2
USP35-202ENST00000528910 SIGLEC1Q9BZZ2 1709 aa27.53■■■□□ 2
USP35-202ENST00000528910 SYCP2Q9BX26 1530 aa27.53■■■□□ 2
USP35-202ENST00000528910 BCORL1Q5H9F3 1711 aa27.52■■■□□ 2
USP35-202ENST00000528910 PLEKHH2Q8IVE3 1493 aa27.51■■□□□ 1.99
USP35-202ENST00000528910 ADAMTSL3P82987 1691 aa27.5■■□□□ 1.99
USP35-202ENST00000528910 TRAPPC8Q9Y2L5 1435 aa27.49■■□□□ 1.99
USP35-202ENST00000528910 MLH3Q9UHC1 1453 aa27.48■■□□□ 1.99
USP35-202ENST00000528910 KIAA1107Q9UPP5 1409 aa27.48■■□□□ 1.99
USP35-202ENST00000528910 DIP2CQ9Y2E4 1556 aa27.48■■□□□ 1.99
USP35-202ENST00000528910 ABCA6Q8N139 1617 aa27.47■■□□□ 1.99
USP35-202ENST00000528910 KIDINS220Q9ULH0 1771 aa27.46■■□□□ 1.99
USP35-202ENST00000528910 REREQ9P2R6 1566 aa27.46■■□□□ 1.99
USP35-202ENST00000528910 CFDP1Q9UEE9 299 aaPredicted RBP27.44■■□□□ 1.98
USP35-202ENST00000528910 C9orf84Q5VXU9 1444 aa27.43■■□□□ 1.98
USP35-202ENST00000528910 ATP10AO60312 1499 aa27.42■■□□□ 1.98
USP35-202ENST00000528910 INO80Q9ULG1 1556 aaPredicted RBP27.42■■□□□ 1.98
USP35-202ENST00000528910 AFAP1Q8N556 730 aa27.41■■□□□ 1.98
USP35-202ENST00000528910 MADDQ8WXG6 1647 aa27.39■■□□□ 1.98
USP35-202ENST00000528910 ZNF777Q9ULD5 760 aaPredicted RBP27.38■■□□□ 1.97
USP35-202ENST00000528910 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
USP35-202ENST00000528910 CAMSAP2Q08AD1 1489 aa27.37■■□□□ 1.97
USP35-202ENST00000528910 MBD5Q9P267 1494 aa27.36■■□□□ 1.97
USP35-202ENST00000528910 ATP7AQ04656 1500 aa27.36■■□□□ 1.97
USP35-202ENST00000528910 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
USP35-202ENST00000528910 ARHGEF5Q12774 1597 aa27.31■■□□□ 1.96
USP35-202ENST00000528910 MYOM3Q5VTT5 1437 aa27.31■■□□□ 1.96
USP35-202ENST00000528910 AGLP35573 1532 aa27.31■■□□□ 1.96
USP35-202ENST00000528910 RIMS1Q86UR5 1692 aaKnown RBP27.3■■□□□ 1.96
USP35-202ENST00000528910 ZNF644Q9H582 1327 aaPredicted RBP27.3■■□□□ 1.96
USP35-202ENST00000528910 HNRNPMP52272 730 aaKnown RBP eCLIP27.29■■□□□ 1.96
USP35-202ENST00000528910 ARID4BQ4LE39 1312 aaPredicted RBP27.29■■□□□ 1.96
USP35-202ENST00000528910 CCDC141Q6ZP82 1450 aa27.28■■□□□ 1.96
USP35-202ENST00000528910 MIA2Q96PC5 1412 aa27.28■■□□□ 1.96
USP35-202ENST00000528910 APLP2Q06481 763 aa27.28■■□□□ 1.96
USP35-202ENST00000528910 ADGBQ8N7X0 1667 aa27.27■■□□□ 1.96
USP35-202ENST00000528910 PLXNC1O60486 1568 aa27.27■■□□□ 1.96
USP35-202ENST00000528910 PTPRMP28827 1452 aa27.26■■□□□ 1.95
USP35-202ENST00000528910 SPAG9O60271 1321 aaKnown RBP27.25■■□□□ 1.95
USP35-202ENST00000528910 RTEL1-TNFRSF6BF6WH68 1400 aa27.22■■□□□ 1.95
USP35-202ENST00000528910 MYT1LQ9UL68 1186 aa27.21■■□□□ 1.95
USP35-202ENST00000528910 PTPN23Q9H3S7 1636 aa27.19■■□□□ 1.94
USP35-202ENST00000528910 MAST1Q9Y2H9 1570 aa27.19■■□□□ 1.94
USP35-202ENST00000528910 CROCC2H7BZ55 1655 aa27.17■■□□□ 1.94
USP35-202ENST00000528910 A2MP01023 1474 aa27.16■■□□□ 1.94
USP35-202ENST00000528910 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
USP35-202ENST00000528910 FGD6Q6ZV73 1430 aa27.14■■□□□ 1.93
USP35-202ENST00000528910 TCOF1Q13428 1488 aaKnown RBP27.13■■□□□ 1.93
USP35-202ENST00000528910 DNMT1P26358 1616 aaKnown RBP27.09■■□□□ 1.93
USP35-202ENST00000528910 MLECQ14165 292 aa27.09■■□□□ 1.93
USP35-202ENST00000528910 MROH2AA6NES4 1674 aa27.08■■□□□ 1.92
USP35-202ENST00000528910 SHANK2Q9UPX8 1470 aa27.07■■□□□ 1.92
USP35-202ENST00000528910 C3P01024 1663 aa27.05■■□□□ 1.92
USP35-202ENST00000528910 CNTLNQ9NXG0 1405 aa27.01■■□□□ 1.91
USP35-202ENST00000528910 DHX29Q7Z478 1369 aaKnown RBP27.01■■□□□ 1.91
USP35-202ENST00000528910 EIF2AK4Q9P2K8 1649 aaKnown RBP27■■□□□ 1.91
USP35-202ENST00000528910 ABCC5O15440 1437 aa26.99■■□□□ 1.91
USP35-202ENST00000528910 DAPK1P53355 1430 aa26.99■■□□□ 1.91
USP35-202ENST00000528910 CLTCQ00610 1675 aaKnown RBP26.98■■□□□ 1.91
USP35-202ENST00000528910 TSPY4P0CV99 314 aa26.98■■□□□ 1.91
USP35-202ENST00000528910 TSPY10P0CW01 314 aa26.98■■□□□ 1.91
USP35-202ENST00000528910 FAM135AQ9P2D6 1515 aa26.98■■□□□ 1.91
USP35-202ENST00000528910 PREX1Q8TCU6 1659 aa26.97■■□□□ 1.91
USP35-202ENST00000528910 RNF17Q9BXT8 1623 aaKnown RBP26.97■■□□□ 1.91
USP35-202ENST00000528910 LMTK3Q96Q04 1460 aa26.96■■□□□ 1.91
USP35-202ENST00000528910 DUOX2Q9NRD8 1548 aa26.92■■□□□ 1.9
USP35-202ENST00000528910 SETD1BQ9UPS6 1966 aaKnown RBP26.9■■□□□ 1.9
USP35-202ENST00000528910 KDM5DQ9BY66 1539 aa26.88■■□□□ 1.89
USP35-202ENST00000528910 MROH1Q8NDA8 1641 aa26.87■■□□□ 1.89
USP35-202ENST00000528910 ZC3H13Q5T200 1668 aaKnown RBP26.87■■□□□ 1.89
USP35-202ENST00000528910 ADGRL2O95490 1459 aa26.87■■□□□ 1.89
USP35-202ENST00000528910 ESF1Q9H501 851 aaKnown RBP26.86■■□□□ 1.89
USP35-202ENST00000528910 PPP6R1Q9UPN7 881 aa26.86■■□□□ 1.89
USP35-202ENST00000528910 KIF15Q9NS87 1388 aa26.84■■□□□ 1.89
USP35-202ENST00000528910 ERBINQ96RT1 1412 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms