RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 ABCC5O15440 1437 aa20.75■□□□□ 0.91
CHEK1-210ENST00000528276 AKNAQ7Z591 1439 aa20.75■□□□□ 0.91
CHEK1-210ENST00000528276 ROCK1Q13464 1354 aa20.74■□□□□ 0.91
CHEK1-210ENST00000528276 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
CHEK1-210ENST00000528276 NPM1P06748 294 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHEK1-210ENST00000528276 DNMT1P26358 1616 aaKnown RBP20.73■□□□□ 0.91
CHEK1-210ENST00000528276 ZCCHC11Q5TAX3 1644 aaKnown RBP20.71■□□□□ 0.91
CHEK1-210ENST00000528276 TSPY4P0CV99 314 aa20.7■□□□□ 0.9
CHEK1-210ENST00000528276 TSPY10P0CW01 314 aa20.7■□□□□ 0.9
CHEK1-210ENST00000528276 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
CHEK1-210ENST00000528276 CDC42BPAQ5VT25 1732 aa20.68■□□□□ 0.9
CHEK1-210ENST00000528276 RSPH4AQ5TD94 716 aa20.67■□□□□ 0.9
CHEK1-210ENST00000528276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.66■□□□□ 0.9
CHEK1-210ENST00000528276 ARHGAP5Q13017 1502 aa20.65■□□□□ 0.9
CHEK1-210ENST00000528276 ANKRD30AQ9BXX3 1397 aa20.65■□□□□ 0.9
CHEK1-210ENST00000528276 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.9
CHEK1-210ENST00000528276 MAPKBP1O60336 1514 aa20.64■□□□□ 0.9
CHEK1-210ENST00000528276 GCC2Q8IWJ2 1684 aa20.63■□□□□ 0.89
CHEK1-210ENST00000528276 NEUROD1Q13562 356 aa20.62■□□□□ 0.89
CHEK1-210ENST00000528276 EFCAB2Q5VUJ9 269 aa20.62■□□□□ 0.89
CHEK1-210ENST00000528276 PREX2Q70Z35 1606 aa20.62■□□□□ 0.89
CHEK1-210ENST00000528276 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
CHEK1-210ENST00000528276 WDR7Q9Y4E6 1490 aa20.61■□□□□ 0.89
CHEK1-210ENST00000528276 NCOA1Q15788 1441 aa20.61■□□□□ 0.89
CHEK1-210ENST00000528276 PLCH2O75038 1416 aa20.59■□□□□ 0.89
CHEK1-210ENST00000528276 C9orf84Q5VXU9 1444 aa20.59■□□□□ 0.89
CHEK1-210ENST00000528276 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
CHEK1-210ENST00000528276 SHANK2Q9UPX8 1470 aa20.59■□□□□ 0.89
CHEK1-210ENST00000528276 ADGRL2O95490 1459 aa20.57■□□□□ 0.88
CHEK1-210ENST00000528276 SIN3AQ96ST3 1273 aa20.57■□□□□ 0.88
CHEK1-210ENST00000528276 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
CHEK1-210ENST00000528276 TIMELESSQ9UNS1 1208 aa20.56■□□□□ 0.88
CHEK1-210ENST00000528276 ASXL2Q76L83 1435 aa20.55■□□□□ 0.88
CHEK1-210ENST00000528276 ARHGEF5Q12774 1597 aa20.55■□□□□ 0.88
CHEK1-210ENST00000528276 SAMD9LQ8IVG5 1584 aa20.55■□□□□ 0.88
CHEK1-210ENST00000528276 MYO5CQ9NQX4 1742 aa20.55■□□□□ 0.88
CHEK1-210ENST00000528276 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
CHEK1-210ENST00000528276 CDC42BPBQ9Y5S2 1711 aa20.55■□□□□ 0.88
CHEK1-210ENST00000528276 MBD5Q9P267 1494 aa20.54■□□□□ 0.88
CHEK1-210ENST00000528276 ZNF316A6NFI3 1004 aaPredicted RBP20.54■□□□□ 0.88
CHEK1-210ENST00000528276 KIAA1107Q9UPP5 1409 aa20.53■□□□□ 0.88
CHEK1-210ENST00000528276 CROCC2H7BZ55 1655 aa20.53■□□□□ 0.88
CHEK1-210ENST00000528276 ADGBQ8N7X0 1667 aa20.53■□□□□ 0.88
CHEK1-210ENST00000528276 KDM6BO15054 1643 aa20.51■□□□□ 0.87
CHEK1-210ENST00000528276 ANKRD50Q9ULJ7 1429 aa20.51■□□□□ 0.87
CHEK1-210ENST00000528276 SYCP2Q9BX26 1530 aa20.51■□□□□ 0.87
CHEK1-210ENST00000528276 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
CHEK1-210ENST00000528276 KIF15Q9NS87 1388 aa20.49■□□□□ 0.87
CHEK1-210ENST00000528276 TONSLQ96HA7 1378 aa20.48■□□□□ 0.87
CHEK1-210ENST00000528276 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
CHEK1-210ENST00000528276 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
CHEK1-210ENST00000528276 FANCAO15360 1455 aa20.42■□□□□ 0.86
CHEK1-210ENST00000528276 ABCA9Q8IUA7 1624 aa20.42■□□□□ 0.86
CHEK1-210ENST00000528276 NUP155O75694 1391 aa20.4■□□□□ 0.86
CHEK1-210ENST00000528276 ABCC1P33527 1531 aa20.4■□□□□ 0.86
CHEK1-210ENST00000528276 FOXD1Q16676 465 aa20.39■□□□□ 0.86
CHEK1-210ENST00000528276 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.86
CHEK1-210ENST00000528276 SPAG9O60271 1321 aaKnown RBP20.39■□□□□ 0.85
CHEK1-210ENST00000528276 ARHGEF12Q9NZN5 1544 aa20.39■□□□□ 0.85
CHEK1-210ENST00000528276 MAST1Q9Y2H9 1570 aa20.38■□□□□ 0.85
CHEK1-210ENST00000528276 MYT1LQ9UL68 1186 aa20.38■□□□□ 0.85
CHEK1-210ENST00000528276 CD109Q6YHK3 1445 aa20.37■□□□□ 0.85
CHEK1-210ENST00000528276 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
CHEK1-210ENST00000528276 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
CHEK1-210ENST00000528276 DENND4BO75064 1496 aaPredicted RBP20.36■□□□□ 0.85
CHEK1-210ENST00000528276 PKD2Q13563 968 aa20.35■□□□□ 0.85
CHEK1-210ENST00000528276 AFAP1Q8N556 730 aa20.35■□□□□ 0.85
CHEK1-210ENST00000528276 ADGRL1O94910 1474 aa20.35■□□□□ 0.85
CHEK1-210ENST00000528276 PZPP20742 1482 aa20.34■□□□□ 0.85
CHEK1-210ENST00000528276 RIMBP3CA6NJZ7 1639 aa20.34■□□□□ 0.85
CHEK1-210ENST00000528276 RIMBP3BA6NNM3 1639 aa20.34■□□□□ 0.85
CHEK1-210ENST00000528276 RIMBP3Q9UFD9 1639 aa20.34■□□□□ 0.85
CHEK1-210ENST00000528276 SCAPERQ9BY12 1400 aa20.33■□□□□ 0.85
CHEK1-210ENST00000528276 ANKRD30BQ9BXX2 1392 aa20.32■□□□□ 0.84
CHEK1-210ENST00000528276 RTEL1-TNFRSF6BF6WH68 1400 aa20.32■□□□□ 0.84
CHEK1-210ENST00000528276 PLXNC1O60486 1568 aa20.31■□□□□ 0.84
CHEK1-210ENST00000528276 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
CHEK1-210ENST00000528276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.3■□□□□ 0.842e-7■■□□□ 11.9
CHEK1-210ENST00000528276 ERBINQ96RT1 1412 aa20.28■□□□□ 0.84
CHEK1-210ENST00000528276 KDM5DQ9BY66 1539 aa20.26■□□□□ 0.83
CHEK1-210ENST00000528276 CFAP74Q9C0B2 1584 aa20.25■□□□□ 0.83
CHEK1-210ENST00000528276 RPRD2Q5VT52 1461 aaKnown RBP20.24■□□□□ 0.83
CHEK1-210ENST00000528276 L3MBTL2Q969R5 705 aa20.23■□□□□ 0.83
CHEK1-210ENST00000528276 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
CHEK1-210ENST00000528276 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
CHEK1-210ENST00000528276 ATP7AQ04656 1500 aa20.2■□□□□ 0.82
CHEK1-210ENST00000528276 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
CHEK1-210ENST00000528276 FAM69CQ0P6D2 419 aa20.19■□□□□ 0.82
CHEK1-210ENST00000528276 NEO1Q92859 1461 aa20.19■□□□□ 0.82
CHEK1-210ENST00000528276 UNC13BO14795 1591 aa20.17■□□□□ 0.82
CHEK1-210ENST00000528276 POGZQ7Z3K3 1410 aa20.15■□□□□ 0.82
CHEK1-210ENST00000528276 KANK1Q14678 1352 aa20.15■□□□□ 0.82
CHEK1-210ENST00000528276 DHX29Q7Z478 1369 aaKnown RBP20.15■□□□□ 0.82
CHEK1-210ENST00000528276 INO80Q9ULG1 1556 aaPredicted RBP20.15■□□□□ 0.82
CHEK1-210ENST00000528276 KIF3BO15066 747 aa20.14■□□□□ 0.81
CHEK1-210ENST00000528276 GLI2P10070 1586 aa20.13■□□□□ 0.81
CHEK1-210ENST00000528276 RAPGEF3O95398 923 aa20.1■□□□□ 0.81
CHEK1-210ENST00000528276 MAGI2Q86UL8 1455 aa20.1■□□□□ 0.81
CHEK1-210ENST00000528276 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
CHEK1-210ENST00000528276 IQGAP3Q86VI3 1631 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms