RNA–Protein interactions for RNA: ENST00000528147.1

CDC27-205, Transcript of cell division cycle 27, humanhuman

TSL 4

Gene CDC27, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-205ENST00000528147 PLCH2O75038 1416 aa23.13■■□□□ 1.29
CDC27-205ENST00000528147 UBTFP17480 764 aaKnown RBP23.12■■□□□ 1.29
CDC27-205ENST00000528147 KIF14Q15058 1648 aa23.11■■□□□ 1.29
CDC27-205ENST00000528147 MYO5CQ9NQX4 1742 aa23.11■■□□□ 1.29
CDC27-205ENST00000528147 YEATS2Q9ULM3 1422 aa23.1■■□□□ 1.29
CDC27-205ENST00000528147 ZFYVE16Q7Z3T8 1539 aa23.1■■□□□ 1.29
CDC27-205ENST00000528147 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
CDC27-205ENST00000528147 POGZQ7Z3K3 1410 aa23.08■■□□□ 1.29
CDC27-205ENST00000528147 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.29
CDC27-205ENST00000528147 RIMS1Q86UR5 1692 aaKnown RBP23.08■■□□□ 1.29
CDC27-205ENST00000528147 SCAPERQ9BY12 1400 aa23.05■■□□□ 1.28
CDC27-205ENST00000528147 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
CDC27-205ENST00000528147 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
CDC27-205ENST00000528147 LMTK3Q96Q04 1460 aa23.03■■□□□ 1.28
CDC27-205ENST00000528147 ARID4BQ4LE39 1312 aaPredicted RBP23.03■■□□□ 1.28
CDC27-205ENST00000528147 SCAF1Q9H7N4 1312 aaKnown RBP22.99■■□□□ 1.27
CDC27-205ENST00000528147 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
CDC27-205ENST00000528147 KDM5CP41229 1560 aa22.98■■□□□ 1.27
CDC27-205ENST00000528147 ATP1B4Q9UN42 357 aaPredicted RBP22.97■■□□□ 1.27
CDC27-205ENST00000528147 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
CDC27-205ENST00000528147 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
CDC27-205ENST00000528147 CASKIN1Q8WXD9 1431 aa22.96■■□□□ 1.27
CDC27-205ENST00000528147 EFCAB2Q5VUJ9 269 aa22.95■■□□□ 1.26
CDC27-205ENST00000528147 ARHGAP5Q13017 1502 aa22.94■■□□□ 1.26
CDC27-205ENST00000528147 ARHGEF12Q9NZN5 1544 aa22.94■■□□□ 1.26
CDC27-205ENST00000528147 PREX2Q70Z35 1606 aa22.93■■□□□ 1.26
CDC27-205ENST00000528147 ATP10AO60312 1499 aa22.93■■□□□ 1.26
CDC27-205ENST00000528147 ZNF518AQ6AHZ1 1483 aa22.93■■□□□ 1.26
CDC27-205ENST00000528147 CLIP1P30622 1438 aa22.93■■□□□ 1.26
CDC27-205ENST00000528147 CCDC18Q5T9S5 1454 aa22.92■■□□□ 1.26
CDC27-205ENST00000528147 C9orf84Q5VXU9 1444 aa22.91■■□□□ 1.26
CDC27-205ENST00000528147 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.25
CDC27-205ENST00000528147 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
CDC27-205ENST00000528147 ABCC1P33527 1531 aa22.88■■□□□ 1.25
CDC27-205ENST00000528147 REREQ9P2R6 1566 aa22.88■■□□□ 1.25
CDC27-205ENST00000528147 FYCO1Q9BQS8 1478 aa22.87■■□□□ 1.25
CDC27-205ENST00000528147 ABCA6Q8N139 1617 aa22.86■■□□□ 1.25
CDC27-205ENST00000528147 ITSN2Q9NZM3 1697 aa22.86■■□□□ 1.25
CDC27-205ENST00000528147 AFAP1Q8N556 730 aa22.84■■□□□ 1.25
CDC27-205ENST00000528147 MLH3Q9UHC1 1453 aa22.84■■□□□ 1.25
CDC27-205ENST00000528147 MLECQ14165 292 aa22.82■■□□□ 1.24
CDC27-205ENST00000528147 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
CDC27-205ENST00000528147 MAPK8IP2Q13387 824 aaPredicted RBP22.8■■□□□ 1.24
CDC27-205ENST00000528147 KIDINS220Q9ULH0 1771 aa22.79■■□□□ 1.24
CDC27-205ENST00000528147 PREX1Q8TCU6 1659 aa22.79■■□□□ 1.24
CDC27-205ENST00000528147 HSPA2P54652 639 aa22.79■■□□□ 1.24
CDC27-205ENST00000528147 DMRT2Q9Y5R5 561 aa22.77■■□□□ 1.24
CDC27-205ENST00000528147 AGLP35573 1532 aa22.77■■□□□ 1.24
CDC27-205ENST00000528147 SAMD9LQ8IVG5 1584 aa22.76■■□□□ 1.23
CDC27-205ENST00000528147 FBXO41Q8TF61 875 aa22.74■■□□□ 1.23
CDC27-205ENST00000528147 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
CDC27-205ENST00000528147 C3P01024 1663 aa22.71■■□□□ 1.23
CDC27-205ENST00000528147 SETD1BQ9UPS6 1966 aaKnown RBP22.7■■□□□ 1.23
CDC27-205ENST00000528147 CEBPAP49715 358 aaPredicted RBP22.7■■□□□ 1.22
CDC27-205ENST00000528147 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.22
CDC27-205ENST00000528147 STRCQ7RTU9 1775 aa22.68■■□□□ 1.22
CDC27-205ENST00000528147 INO80Q9ULG1 1556 aaPredicted RBP22.65■■□□□ 1.22
CDC27-205ENST00000528147 KIAA1107Q9UPP5 1409 aa22.63■■□□□ 1.21
CDC27-205ENST00000528147 PLXNC1O60486 1568 aa22.62■■□□□ 1.21
CDC27-205ENST00000528147 MYT1LQ9UL68 1186 aa22.61■■□□□ 1.21
CDC27-205ENST00000528147 ATP7AQ04656 1500 aa22.61■■□□□ 1.21
CDC27-205ENST00000528147 TIAM1Q13009 1591 aa22.6■■□□□ 1.21
CDC27-205ENST00000528147 UHRF1BP1Q6BDS2 1440 aa22.6■■□□□ 1.21
CDC27-205ENST00000528147 MROH2AA6NES4 1674 aa22.6■■□□□ 1.21
CDC27-205ENST00000528147 PLEKHH2Q8IVE3 1493 aa22.59■■□□□ 1.21
CDC27-205ENST00000528147 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
CDC27-205ENST00000528147 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
CDC27-205ENST00000528147 EHBP1L1Q8N3D4 1523 aa22.57■■□□□ 1.2
CDC27-205ENST00000528147 CNTLNQ9NXG0 1405 aa22.57■■□□□ 1.2
CDC27-205ENST00000528147 HNRNPMP52272 730 aaKnown RBP eCLIP22.56■■□□□ 1.2
CDC27-205ENST00000528147 MTUS2Q5JR59 1369 aa22.55■■□□□ 1.2
CDC27-205ENST00000528147 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
CDC27-205ENST00000528147 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
CDC27-205ENST00000528147 CEP162Q5TB80 1403 aa22.54■■□□□ 1.2
CDC27-205ENST00000528147 CFDP1Q9UEE9 299 aaPredicted RBP22.53■■□□□ 1.2
CDC27-205ENST00000528147 MBD5Q9P267 1494 aa22.53■■□□□ 1.2
CDC27-205ENST00000528147 CERKQ8TCT0 537 aa22.51■■□□□ 1.19
CDC27-205ENST00000528147 A2MP01023 1474 aa22.51■■□□□ 1.19
CDC27-205ENST00000528147 CLTCQ00610 1675 aaKnown RBP22.5■■□□□ 1.19
CDC27-205ENST00000528147 ADGBQ8N7X0 1667 aa22.5■■□□□ 1.19
CDC27-205ENST00000528147 NPATQ14207 1427 aa22.49■■□□□ 1.19
CDC27-205ENST00000528147 ZNF644Q9H582 1327 aaPredicted RBP22.48■■□□□ 1.19
CDC27-205ENST00000528147 PTPRTO14522 1441 aa22.46■■□□□ 1.19
CDC27-205ENST00000528147 ESF1Q9H501 851 aaKnown RBP22.45■■□□□ 1.18
CDC27-205ENST00000528147 ZMYM3Q14202 1370 aa22.45■■□□□ 1.18
CDC27-205ENST00000528147 NCOA1Q15788 1441 aa22.45■■□□□ 1.18
CDC27-205ENST00000528147 ZNF142P52746 1687 aaPredicted RBP22.44■■□□□ 1.18
CDC27-205ENST00000528147 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
CDC27-205ENST00000528147 RTEL1-TNFRSF6BF6WH68 1400 aa22.42■■□□□ 1.18
CDC27-205ENST00000528147 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
CDC27-205ENST00000528147 PPP4R3CPQ6ZMV5 832 aa22.41■■□□□ 1.18
CDC27-205ENST00000528147 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
CDC27-205ENST00000528147 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
CDC27-205ENST00000528147 CAMSAP1Q5T5Y3 1602 aa22.4■■□□□ 1.18
CDC27-205ENST00000528147 CAMSAP2Q08AD1 1489 aa22.38■■□□□ 1.17
CDC27-205ENST00000528147 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
CDC27-205ENST00000528147 CEP170BQ9Y4F5 1589 aaPredicted RBP22.36■■□□□ 1.17
CDC27-205ENST00000528147 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
CDC27-205ENST00000528147 ARHGEF5Q12774 1597 aa22.33■■□□□ 1.17
CDC27-205ENST00000528147 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms