RNA–Protein interactions for RNA: ENST00000527104.5

NUP98-214, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-214ENST00000527104 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
NUP98-214ENST00000527104 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
NUP98-214ENST00000527104 SCAPERQ9BY12 1400 aa12.63□□□□□ -0.39
NUP98-214ENST00000527104 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
NUP98-214ENST00000527104 PREX1Q8TCU6 1659 aa12.63□□□□□ -0.39
NUP98-214ENST00000527104 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
NUP98-214ENST00000527104 SOCS7O14512 581 aa12.62□□□□□ -0.39
NUP98-214ENST00000527104 ILDR2Q71H61 639 aa12.61□□□□□ -0.39
NUP98-214ENST00000527104 ARHGEF12Q9NZN5 1544 aa12.61□□□□□ -0.39
NUP98-214ENST00000527104 UHRF1BP1Q6BDS2 1440 aa12.61□□□□□ -0.39
NUP98-214ENST00000527104 SPATA31D1Q6ZQQ2 1576 aa12.6□□□□□ -0.39
NUP98-214ENST00000527104 ATP10AO60312 1499 aa12.6□□□□□ -0.39
NUP98-214ENST00000527104 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
NUP98-214ENST00000527104 CDK13Q14004 1512 aaKnown RBP12.6□□□□□ -0.39
NUP98-214ENST00000527104 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
NUP98-214ENST00000527104 PLCH2O75038 1416 aa12.58□□□□□ -0.4
NUP98-214ENST00000527104 ATP1B4Q9UN42 357 aaPredicted RBP12.58□□□□□ -0.4
NUP98-214ENST00000527104 EFCAB2Q5VUJ9 269 aa12.57□□□□□ -0.4
NUP98-214ENST00000527104 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
NUP98-214ENST00000527104 EEA1Q15075 1411 aa12.55□□□□□ -0.4
NUP98-214ENST00000527104 ZNF518AQ6AHZ1 1483 aa12.55□□□□□ -0.4
NUP98-214ENST00000527104 MYO5CQ9NQX4 1742 aa12.54□□□□□ -0.4
NUP98-214ENST00000527104 ARHGAP5Q13017 1502 aa12.53□□□□□ -0.4
NUP98-214ENST00000527104 KIF14Q15058 1648 aa12.52□□□□□ -0.4
NUP98-214ENST00000527104 STRCQ7RTU9 1775 aa12.52□□□□□ -0.41
NUP98-214ENST00000527104 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.41
NUP98-214ENST00000527104 PTPRTO14522 1441 aa12.51□□□□□ -0.41
NUP98-214ENST00000527104 CLIP1P30622 1438 aa12.5□□□□□ -0.41
NUP98-214ENST00000527104 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
NUP98-214ENST00000527104 DIP2CQ9Y2E4 1556 aa12.5□□□□□ -0.41
NUP98-214ENST00000527104 KDM5CP41229 1560 aa12.49□□□□□ -0.41
NUP98-214ENST00000527104 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
NUP98-214ENST00000527104 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
NUP98-214ENST00000527104 C3P01024 1663 aa12.47□□□□□ -0.41
NUP98-214ENST00000527104 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
NUP98-214ENST00000527104 IQSEC2Q5JU85 1478 aa12.46□□□□□ -0.41
NUP98-214ENST00000527104 TROQ12816 1431 aaPredicted RBP12.46□□□□□ -0.41
NUP98-214ENST00000527104 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.41
NUP98-214ENST00000527104 ABCA6Q8N139 1617 aa12.46□□□□□ -0.41
NUP98-214ENST00000527104 LTBP4Q8N2S1 1624 aa12.45□□□□□ -0.42
NUP98-214ENST00000527104 SENP3Q9H4L4 574 aaPredicted RBP12.45□□□□□ -0.42
NUP98-214ENST00000527104 NCOA1Q15788 1441 aa12.45□□□□□ -0.42
NUP98-214ENST00000527104 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
NUP98-214ENST00000527104 MLH3Q9UHC1 1453 aa12.44□□□□□ -0.42
NUP98-214ENST00000527104 CNTLNQ9NXG0 1405 aa12.44□□□□□ -0.42
NUP98-214ENST00000527104 AGLP35573 1532 aa12.43□□□□□ -0.42
NUP98-214ENST00000527104 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
NUP98-214ENST00000527104 ABCC1P33527 1531 aa12.42□□□□□ -0.42
NUP98-214ENST00000527104 CAMSAP1Q5T5Y3 1602 aa12.41□□□□□ -0.42
NUP98-214ENST00000527104 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
NUP98-214ENST00000527104 ARHGAP35Q9NRY4 1499 aa12.4□□□□□ -0.43
NUP98-214ENST00000527104 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
NUP98-214ENST00000527104 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
NUP98-214ENST00000527104 NPATQ14207 1427 aa12.39□□□□□ -0.43
NUP98-214ENST00000527104 ZNF335Q9H4Z2 1342 aaPredicted RBP12.38□□□□□ -0.43
NUP98-214ENST00000527104 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
NUP98-214ENST00000527104 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
NUP98-214ENST00000527104 CDC42BPBQ9Y5S2 1711 aa12.37□□□□□ -0.43
NUP98-214ENST00000527104 MROH2AA6NES4 1674 aa12.36□□□□□ -0.43
NUP98-214ENST00000527104 ZNF777Q9ULD5 760 aaPredicted RBP12.36□□□□□ -0.43
NUP98-214ENST00000527104 CCDC18Q5T9S5 1454 aa12.35□□□□□ -0.43
NUP98-214ENST00000527104 KIDINS220Q9ULH0 1771 aa12.35□□□□□ -0.43
NUP98-214ENST00000527104 ZMYM3Q14202 1370 aa12.34□□□□□ -0.43
NUP98-214ENST00000527104 MYO3AQ8NEV4 1616 aa12.34□□□□□ -0.43
NUP98-214ENST00000527104 PKD2Q13563 968 aa12.34□□□□□ -0.43
NUP98-214ENST00000527104 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
NUP98-214ENST00000527104 SAMD9LQ8IVG5 1584 aa12.33□□□□□ -0.44
NUP98-214ENST00000527104 LRRIQ1Q96JM4 1722 aa12.33□□□□□ -0.44
NUP98-214ENST00000527104 PLA2R1Q13018 1463 aa12.33□□□□□ -0.44
NUP98-214ENST00000527104 SYCP2Q9BX26 1530 aa12.32□□□□□ -0.44
NUP98-214ENST00000527104 CEP170BQ9Y4F5 1589 aaPredicted RBP12.32□□□□□ -0.44
NUP98-214ENST00000527104 PPP6R1Q9UPN7 881 aa12.32□□□□□ -0.44
NUP98-214ENST00000527104 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
NUP98-214ENST00000527104 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
NUP98-214ENST00000527104 SUPT6HQ7KZ85 1726 aaKnown RBP12.31□□□□□ -0.44
NUP98-214ENST00000527104 TCOF1Q13428 1488 aaKnown RBP12.3□□□□□ -0.44
NUP98-214ENST00000527104 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
NUP98-214ENST00000527104 ATP7AQ04656 1500 aa12.3□□□□□ -0.44
NUP98-214ENST00000527104 CASKIN1Q8WXD9 1431 aa12.29□□□□□ -0.44
NUP98-214ENST00000527104 CDC42BPAQ5VT25 1732 aa12.29□□□□□ -0.44
NUP98-214ENST00000527104 GGT6Q6P531 493 aa12.29□□□□□ -0.44
NUP98-214ENST00000527104 MED1Q15648 1581 aaPredicted RBP12.29□□□□□ -0.44
NUP98-214ENST00000527104 A2MP01023 1474 aa12.28□□□□□ -0.44
NUP98-214ENST00000527104 HNRNPMP52272 730 aaKnown RBP eCLIP12.28□□□□□ -0.44
NUP98-214ENST00000527104 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
NUP98-214ENST00000527104 HSPA1LP34931 641 aa12.27□□□□□ -0.45
NUP98-214ENST00000527104 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
NUP98-214ENST00000527104 TOM1O60784 492 aa12.26□□□□□ -0.45
NUP98-214ENST00000527104 PLEKHH2Q8IVE3 1493 aa12.26□□□□□ -0.45
NUP98-214ENST00000527104 FYCO1Q9BQS8 1478 aa12.26□□□□□ -0.45
NUP98-214ENST00000527104 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
NUP98-214ENST00000527104 CFDP1Q9UEE9 299 aaPredicted RBP12.25□□□□□ -0.45
NUP98-214ENST00000527104 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
NUP98-214ENST00000527104 CPS1P31327 1500 aa12.24□□□□□ -0.45
NUP98-214ENST00000527104 GPATCH8Q9UKJ3 1502 aaKnown RBP12.24□□□□□ -0.45
NUP98-214ENST00000527104 CCNB3Q8WWL7 1395 aa12.23□□□□□ -0.45
NUP98-214ENST00000527104 KIAA1107Q9UPP5 1409 aa12.22□□□□□ -0.45
NUP98-214ENST00000527104 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
NUP98-214ENST00000527104 ADGBQ8N7X0 1667 aa12.21□□□□□ -0.45
NUP98-214ENST00000527104 SHANK2Q9UPX8 1470 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms