RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 SOX12O15370 315 aa7.62□□□□□ -1.19
C11orf54-204ENST00000527003 ANKRD13DQ6ZTN6 518 aa7.61□□□□□ -1.19
C11orf54-204ENST00000527003 LSM11P83369 360 aaKnown RBP eCLIP7.6□□□□□ -1.19
C11orf54-204ENST00000527003 ARSIQ5FYB1 569 aa7.6□□□□□ -1.19
C11orf54-204ENST00000527003 ZNF316A6NFI3 1004 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-204ENST00000527003 MS4A4AQ96JQ5 239 aa7.58□□□□□ -1.2
C11orf54-204ENST00000527003 PBX2P40425 430 aa7.56□□□□□ -1.2
C11orf54-204ENST00000527003 PHF8Q9UPP1 1060 aa7.54□□□□□ -1.2
C11orf54-204ENST00000527003 RIOK3O14730 519 aaKnown RBP7.53□□□□□ -1.2
C11orf54-204ENST00000527003 KHSRPQ92945 711 aaKnown RBP eCLIP7.52□□□□□ -1.219e-10■■■■□ 24.3
C11orf54-204ENST00000527003 PLA2G2EQ9NZK7 142 aa7.52□□□□□ -1.21
C11orf54-204ENST00000527003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.51□□□□□ -1.21
C11orf54-204ENST00000527003 VGFO15240 615 aaPredicted RBP7.51□□□□□ -1.21
C11orf54-204ENST00000527003 ZFP91Q96JP5 570 aaPredicted RBP7.51□□□□□ -1.21
C11orf54-204ENST00000527003 HCSTQ9UBK5 93 aa7.51□□□□□ -1.21
C11orf54-204ENST00000527003 RNF25Q96BH1 459 aaPredicted RBP7.49□□□□□ -1.21
C11orf54-204ENST00000527003 NLRP6P59044 892 aa7.48□□□□□ -1.21
C11orf54-204ENST00000527003 KIF3CO14782 793 aa7.47□□□□□ -1.21
C11orf54-204ENST00000527003 NUDT7P0C024 238 aa7.47□□□□□ -1.21
C11orf54-204ENST00000527003 FBXO22Q8NEZ5 403 aa7.46□□□□□ -1.22
C11orf54-204ENST00000527003 SLC34A2O95436 690 aa7.45□□□□□ -1.22
C11orf54-204ENST00000527003 POTEEQ6S8J3 1075 aa7.45□□□□□ -1.22
C11orf54-204ENST00000527003 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
C11orf54-204ENST00000527003 AXIN2Q9Y2T1 843 aa7.44□□□□□ -1.22
C11orf54-204ENST00000527003 C2orf72A6NCS6 295 aa7.43□□□□□ -1.22
C11orf54-204ENST00000527003 ADGRD1Q6QNK2 874 aa7.43□□□□□ -1.22
C11orf54-204ENST00000527003 PCDHGA4Q9Y5G9 962 aa7.43□□□□□ -1.22
C11orf54-204ENST00000527003 PSDA5PKW4 1024 aaPredicted RBP7.41□□□□□ -1.22
C11orf54-204ENST00000527003 ARHGAP33O14559 1287 aa7.41□□□□□ -1.22
C11orf54-204ENST00000527003 TAOK2Q9UL54 1235 aa7.41□□□□□ -1.22
C11orf54-204ENST00000527003 TK2O00142 265 aa7.39□□□□□ -1.23
C11orf54-204ENST00000527003 MFRPQ9BY79 579 aa7.39□□□□□ -1.23
C11orf54-204ENST00000527003 BCL11BQ9C0K0 894 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-204ENST00000527003 HRO43593 1189 aa7.36□□□□□ -1.23
C11orf54-204ENST00000527003 TMC2Q8TDI7 906 aa7.36□□□□□ -1.23
C11orf54-204ENST00000527003 STK24Q9Y6E0 443 aa7.35□□□□□ -1.23
C11orf54-204ENST00000527003 KDM4FA0A1W2PPD8 638 aa7.32□□□□□ -1.24
C11orf54-204ENST00000527003 RGS20O76081 388 aa7.32□□□□□ -1.24
C11orf54-204ENST00000527003 ABCC9O60706 1549 aa7.32□□□□□ -1.24
C11orf54-204ENST00000527003 DMRTA1Q5VZB9 504 aa7.31□□□□□ -1.24
C11orf54-204ENST00000527003 KCTD12Q96CX2 325 aaKnown RBP7.31□□□□□ -1.24
C11orf54-204ENST00000527003 ZCCHC6Q5VYS8 1495 aaKnown RBP7.3□□□□□ -1.24
C11orf54-204ENST00000527003 STK25O00506 426 aa7.3□□□□□ -1.24
C11orf54-204ENST00000527003 PSEN2P49810 448 aa7.3□□□□□ -1.24
C11orf54-204ENST00000527003 PTCD2Q8WV60 388 aaKnown RBP7.3□□□□□ -1.24
C11orf54-204ENST00000527003 STAC3Q96MF2 364 aa7.3□□□□□ -1.24
C11orf54-204ENST00000527003 PPP4R3BQ5MIZ7 849 aa7.29□□□□□ -1.24
C11orf54-204ENST00000527003 IFFO2Q5TF58 517 aa7.28□□□□□ -1.24
C11orf54-204ENST00000527003 DCAF1Q9Y4B6 1507 aa7.27□□□□□ -1.25
C11orf54-204ENST00000527003 KCNH8Q96L42 1107 aa7.27□□□□□ -1.25
C11orf54-204ENST00000527003 DCAF8L2P0C7V8 631 aa7.26□□□□□ -1.25
C11orf54-204ENST00000527003 PKD2Q13563 968 aa7.26□□□□□ -1.25
C11orf54-204ENST00000527003 IRX2Q9BZI1 471 aaPredicted RBP7.26□□□□□ -1.25
C11orf54-204ENST00000527003 MYO15BQ96JP2 1530 aa7.26□□□□□ -1.25
C11orf54-204ENST00000527003 TBC1D12O60347 775 aa7.23□□□□□ -1.25
C11orf54-204ENST00000527003 FOXK1P85037 733 aa7.23□□□□□ -1.25
C11orf54-204ENST00000527003 KCNK17Q96T54 332 aa7.23□□□□□ -1.25
C11orf54-204ENST00000527003 VPS9D1Q9Y2B5 631 aa7.23□□□□□ -1.25
C11orf54-204ENST00000527003 ECM2O94769 699 aaPredicted RBP7.22□□□□□ -1.25
C11orf54-204ENST00000527003 A0A0G2JS52 829 aa7.21□□□□□ -1.26
C11orf54-204ENST00000527003 PTPN5P54829 565 aa7.21□□□□□ -1.26
C11orf54-204ENST00000527003 NACADO15069 1562 aa7.2□□□□□ -1.26
C11orf54-204ENST00000527003 PPP1R37O75864 691 aa7.2□□□□□ -1.26
C11orf54-204ENST00000527003 PLPP6Q8IY26 295 aa7.2□□□□□ -1.26
C11orf54-204ENST00000527003 SLC4A5Q9BY07 1137 aa7.2□□□□□ -1.26
C11orf54-204ENST00000527003 THSD4Q6ZMP0 1018 aa7.19□□□□□ -1.26
C11orf54-204ENST00000527003 RGL2O15211 777 aa7.18□□□□□ -1.26
C11orf54-204ENST00000527003 GPHNQ9NQX3 736 aaPredicted RBP7.18□□□□□ -1.26
C11orf54-204ENST00000527003 BCL2L12Q9HB09 334 aa7.16□□□□□ -1.26
C11orf54-204ENST00000527003 BHMG1C9JSJ3 638 aaPredicted RBP7.15□□□□□ -1.26
C11orf54-204ENST00000527003 DSG2Q14126 1118 aa7.15□□□□□ -1.26
C11orf54-204ENST00000527003 RB1CC1Q8TDY2 1594 aa7.15□□□□□ -1.27
C11orf54-204ENST00000527003 GOLGA8CPA6NN73 597 aa7.14□□□□□ -1.27
C11orf54-204ENST00000527003 ZNF454Q8N9F8 522 aa7.14□□□□□ -1.27
C11orf54-204ENST00000527003 WNT2BQ93097 391 aa7.14□□□□□ -1.27
C11orf54-204ENST00000527003 PTPREP23469 700 aa7.12□□□□□ -1.27
C11orf54-204ENST00000527003 MRPL50Q8N5N7 158 aaKnown RBP7.12□□□□□ -1.27
C11orf54-204ENST00000527003 OXER1Q8TDS5 423 aa7.12□□□□□ -1.27
C11orf54-204ENST00000527003 ZBED2Q9BTP6 218 aa7.11□□□□□ -1.27
C11orf54-204ENST00000527003 FOSBP53539 338 aa7.1□□□□□ -1.27
C11orf54-204ENST00000527003 NBPF3Q9H094 633 aa7.1□□□□□ -1.27
C11orf54-204ENST00000527003 ITGBL1O95965 494 aaPredicted RBP7.07□□□□□ -1.28
C11orf54-204ENST00000527003 Q6ZNB5 142 aa7.07□□□□□ -1.28
C11orf54-204ENST00000527003 UPF1Q92900 1129 aaKnown RBP eCLIP7.07□□□□□ -1.28
C11orf54-204ENST00000527003 JPH4Q96JJ6 628 aa7.06□□□□□ -1.28
C11orf54-204ENST00000527003 ANO8Q9HCE9 1232 aaPredicted RBP7.04□□□□□ -1.28
C11orf54-204ENST00000527003 ANKK1Q8NFD2 765 aa7.03□□□□□ -1.28
C11orf54-204ENST00000527003 ZDHHC16Q969W1 377 aa7.03□□□□□ -1.28
C11orf54-204ENST00000527003 PPP1R15BQ5SWA1 713 aa7.02□□□□□ -1.29
C11orf54-204ENST00000527003 NYAP1Q6ZVC0 841 aa7.02□□□□□ -1.29
C11orf54-204ENST00000527003 HS6ST3Q8IZP7 471 aa7.02□□□□□ -1.29
C11orf54-204ENST00000527003 ADAM33Q9BZ11 813 aa7.02□□□□□ -1.29
C11orf54-204ENST00000527003 CRISPLD2Q9H0B8 497 aa7.02□□□□□ -1.29
C11orf54-204ENST00000527003 LAPTM4AQ15012 233 aa7.01□□□□□ -1.29
C11orf54-204ENST00000527003 RABGEF1Q9UJ41 708 aa7.01□□□□□ -1.29
C11orf54-204ENST00000527003 CHGAP10645 457 aaKnown RBP7□□□□□ -1.29
C11orf54-204ENST00000527003 RTN4Q9NQC3 1192 aaKnown RBP7□□□□□ -1.29
C11orf54-204ENST00000527003 PPP1R3GB7ZBB8 358 aa6.99□□□□□ -1.29
C11orf54-204ENST00000527003 EVI5O60447 810 aa6.99□□□□□ -1.29
C11orf54-204ENST00000527003 SOWAHBA6NEL2 793 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms