RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 CHMP4AQ9BY43 222 aa18.54■□□□□ 0.56
NCAPD3-203ENST00000525964 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
NCAPD3-203ENST00000525964 NUP155O75694 1391 aa18.53■□□□□ 0.56
NCAPD3-203ENST00000525964 CALD1Q05682 793 aaKnown RBP18.52■□□□□ 0.56
NCAPD3-203ENST00000525964 CFAP44Q96MT7 982 aa18.52■□□□□ 0.56
NCAPD3-203ENST00000525964 RSPH4AQ5TD94 716 aa18.51■□□□□ 0.55
NCAPD3-203ENST00000525964 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
NCAPD3-203ENST00000525964 IPO8O15397 1037 aaKnown RBP18.51■□□□□ 0.55
NCAPD3-203ENST00000525964 HSP90AB1P08238 724 aaKnown RBP18.5■□□□□ 0.55
NCAPD3-203ENST00000525964 KTN1Q86UP2 1357 aaKnown RBP18.5■□□□□ 0.55
NCAPD3-203ENST00000525964 TULP1O00294 542 aaPredicted RBP18.5■□□□□ 0.55
NCAPD3-203ENST00000525964 NAP1L2Q9ULW6 460 aaPredicted RBP18.5■□□□□ 0.55
NCAPD3-203ENST00000525964 CSB-PGBD3P0DP91 1061 aa18.5■□□□□ 0.55
NCAPD3-203ENST00000525964 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
NCAPD3-203ENST00000525964 TPRNQ4KMQ1 711 aa18.5■□□□□ 0.55
NCAPD3-203ENST00000525964 KIF3BO15066 747 aa18.49■□□□□ 0.55
NCAPD3-203ENST00000525964 CCER2I3L3R5 266 aa18.49■□□□□ 0.55
NCAPD3-203ENST00000525964 MCCP23508 829 aa18.48■□□□□ 0.55
NCAPD3-203ENST00000525964 TAOK2Q9UL54 1235 aa18.48■□□□□ 0.55
NCAPD3-203ENST00000525964 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
NCAPD3-203ENST00000525964 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
NCAPD3-203ENST00000525964 EID1Q9Y6B2 187 aa18.47■□□□□ 0.55
NCAPD3-203ENST00000525964 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
NCAPD3-203ENST00000525964 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
NCAPD3-203ENST00000525964 GOLGA6L4A6NEF3 574 aa18.45■□□□□ 0.54
NCAPD3-203ENST00000525964 NRDCO43847 1150 aa18.45■□□□□ 0.54
NCAPD3-203ENST00000525964 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
NCAPD3-203ENST00000525964 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
NCAPD3-203ENST00000525964 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
NCAPD3-203ENST00000525964 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
NCAPD3-203ENST00000525964 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
NCAPD3-203ENST00000525964 GOLGA6L6A8MZA4 724 aa18.43■□□□□ 0.54
NCAPD3-203ENST00000525964 FOXD1Q16676 465 aa18.43■□□□□ 0.54
NCAPD3-203ENST00000525964 TERF2IPQ9NYB0 399 aa18.43■□□□□ 0.54
NCAPD3-203ENST00000525964 RALBP1Q15311 655 aa18.42■□□□□ 0.54
NCAPD3-203ENST00000525964 PLCB2Q00722 1185 aa18.42■□□□□ 0.54
NCAPD3-203ENST00000525964 HSCBQ8IWL3 235 aa18.42■□□□□ 0.54
NCAPD3-203ENST00000525964 WASHC2CQ9Y4E1 1318 aa18.41■□□□□ 0.54
NCAPD3-203ENST00000525964 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
NCAPD3-203ENST00000525964 CADPSQ9ULU8 1353 aa18.4■□□□□ 0.54
NCAPD3-203ENST00000525964 B4GALNT3Q6L9W6 998 aa18.4■□□□□ 0.54
NCAPD3-203ENST00000525964 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
NCAPD3-203ENST00000525964 ERICH6BQ5W0A0 696 aa18.38■□□□□ 0.53
NCAPD3-203ENST00000525964 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
NCAPD3-203ENST00000525964 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
NCAPD3-203ENST00000525964 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
NCAPD3-203ENST00000525964 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■■■□ 20.3
NCAPD3-203ENST00000525964 ZNF330Q9Y3S2 320 aaPredicted RBP18.37■□□□□ 0.53
NCAPD3-203ENST00000525964 NGDNQ8NEJ9 315 aaKnown RBP18.36■□□□□ 0.53
NCAPD3-203ENST00000525964 ISY1Q9ULR0 285 aaKnown RBP18.36■□□□□ 0.53
NCAPD3-203ENST00000525964 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
NCAPD3-203ENST00000525964 RAB3GAP2Q9H2M9 1393 aa18.35■□□□□ 0.53
NCAPD3-203ENST00000525964 CCDC9Q9Y3X0 531 aaKnown RBP18.33■□□□□ 0.53
NCAPD3-203ENST00000525964 CCDC18Q5T9S5 1454 aa18.33■□□□□ 0.53
NCAPD3-203ENST00000525964 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
NCAPD3-203ENST00000525964 APBB1O00213 710 aa18.32■□□□□ 0.52
NCAPD3-203ENST00000525964 NOP58Q9Y2X3 529 aaKnown RBP18.32■□□□□ 0.52
NCAPD3-203ENST00000525964 RAPGEF2Q9Y4G8 1499 aa18.32■□□□□ 0.52
NCAPD3-203ENST00000525964 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
NCAPD3-203ENST00000525964 LMOD3Q0VAK6 560 aa18.29■□□□□ 0.52
NCAPD3-203ENST00000525964 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
NCAPD3-203ENST00000525964 GNL2Q13823 731 aaKnown RBP18.29■□□□□ 0.52
NCAPD3-203ENST00000525964 ITPRIPQ8IWB1 547 aa18.29■□□□□ 0.52
NCAPD3-203ENST00000525964 AMPHP49418 695 aa18.28■□□□□ 0.52
NCAPD3-203ENST00000525964 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
NCAPD3-203ENST00000525964 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
NCAPD3-203ENST00000525964 HMMRO75330 724 aa18.26■□□□□ 0.51
NCAPD3-203ENST00000525964 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
NCAPD3-203ENST00000525964 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
NCAPD3-203ENST00000525964 NLRP13Q86W25 1043 aa18.25■□□□□ 0.51
NCAPD3-203ENST00000525964 GPATCH3Q96I76 525 aa18.23■□□□□ 0.51
NCAPD3-203ENST00000525964 SMC4Q9NTJ3 1288 aa18.23■□□□□ 0.51
NCAPD3-203ENST00000525964 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
NCAPD3-203ENST00000525964 PMFBP1Q8TBY8 1022 aa18.22■□□□□ 0.51
NCAPD3-203ENST00000525964 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
NCAPD3-203ENST00000525964 CLSTN1O94985 981 aa18.21■□□□□ 0.51
NCAPD3-203ENST00000525964 VGFO15240 615 aaPredicted RBP18.21■□□□□ 0.51
NCAPD3-203ENST00000525964 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
NCAPD3-203ENST00000525964 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.5
NCAPD3-203ENST00000525964 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
NCAPD3-203ENST00000525964 PTPRGP23470 1445 aa18.19■□□□□ 0.5
NCAPD3-203ENST00000525964 PDE3BQ13370 1112 aa18.18■□□□□ 0.5
NCAPD3-203ENST00000525964 UACAQ9BZF9 1416 aa18.18■□□□□ 0.5
NCAPD3-203ENST00000525964 L1TD1Q5T7N2 865 aaKnown RBP18.18■□□□□ 0.5
NCAPD3-203ENST00000525964 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
NCAPD3-203ENST00000525964 CHAF1AQ13111 956 aaPredicted RBP18.18■□□□□ 0.5
NCAPD3-203ENST00000525964 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
NCAPD3-203ENST00000525964 GTF2E1P29083 439 aaPredicted RBP18.17■□□□□ 0.5
NCAPD3-203ENST00000525964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
NCAPD3-203ENST00000525964 CCDC144AA2RUR9 1427 aa18.17■□□□□ 0.5
NCAPD3-203ENST00000525964 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
NCAPD3-203ENST00000525964 SLC4A10Q6U841 1118 aa18.16■□□□□ 0.5
NCAPD3-203ENST00000525964 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
NCAPD3-203ENST00000525964 CYB5RLQ6IPT4 315 aa18.16■□□□□ 0.5
NCAPD3-203ENST00000525964 GBP4Q96PP9 640 aa18.15■□□□□ 0.5
NCAPD3-203ENST00000525964 PTMSP20962 102 aa18.15■□□□□ 0.5
NCAPD3-203ENST00000525964 G3V3G9 751 aa18.15■□□□□ 0.5
NCAPD3-203ENST00000525964 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
NCAPD3-203ENST00000525964 DCAF8Q5TAQ9 597 aa18.15■□□□□ 0.5
NCAPD3-203ENST00000525964 CCDC34Q96HJ3 373 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms