RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 HDGFP51858 240 aaKnown RBP13.44□□□□□ -0.26
CTSC-203ENST00000524463 DRC7Q8IY82 874 aa13.43□□□□□ -0.26
CTSC-203ENST00000524463 BAZ1BQ9UIG0 1483 aaKnown RBP13.43□□□□□ -0.26
CTSC-203ENST00000524463 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
CTSC-203ENST00000524463 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
CTSC-203ENST00000524463 GOLGA6L6A8MZA4 724 aa13.4□□□□□ -0.26
CTSC-203ENST00000524463 TAF7LQ5H9L4 462 aa13.4□□□□□ -0.26
CTSC-203ENST00000524463 GORABQ5T7V8 394 aa13.4□□□□□ -0.26
CTSC-203ENST00000524463 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
CTSC-203ENST00000524463 PNNQ9H307 717 aaKnown RBP13.39□□□□□ -0.27
CTSC-203ENST00000524463 NOL8Q76FK4 1167 aaKnown RBP13.39□□□□□ -0.27
CTSC-203ENST00000524463 AEBP2Q6ZN18 517 aaPredicted RBP13.39□□□□□ -0.27
CTSC-203ENST00000524463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTSC-203ENST00000524463 ARID3AQ99856 593 aa13.38□□□□□ -0.27
CTSC-203ENST00000524463 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
CTSC-203ENST00000524463 HSP90B1P14625 803 aaKnown RBP13.38□□□□□ -0.27
CTSC-203ENST00000524463 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTSC-203ENST00000524463 VPS53Q5VIR6 699 aa13.38□□□□□ -0.27
CTSC-203ENST00000524463 CREBRFQ8IUR6 639 aa13.38□□□□□ -0.27
CTSC-203ENST00000524463 ITPRIPQ8IWB1 547 aa13.37□□□□□ -0.27
CTSC-203ENST00000524463 SLC4A10Q6U841 1118 aa13.37□□□□□ -0.27
CTSC-203ENST00000524463 HSCBQ8IWL3 235 aa13.36□□□□□ -0.27
CTSC-203ENST00000524463 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
CTSC-203ENST00000524463 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
CTSC-203ENST00000524463 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
CTSC-203ENST00000524463 DCAF1Q9Y4B6 1507 aa13.35□□□□□ -0.27
CTSC-203ENST00000524463 FRAT2O75474 233 aaPredicted RBP13.35□□□□□ -0.27
CTSC-203ENST00000524463 PKD2Q13563 968 aa13.35□□□□□ -0.27
CTSC-203ENST00000524463 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
CTSC-203ENST00000524463 CCDC146Q8IYE0 955 aa13.35□□□□□ -0.27
CTSC-203ENST00000524463 NGDNQ8NEJ9 315 aaKnown RBP13.35□□□□□ -0.27
CTSC-203ENST00000524463 MCCP23508 829 aa13.34□□□□□ -0.27
CTSC-203ENST00000524463 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
CTSC-203ENST00000524463 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
CTSC-203ENST00000524463 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
CTSC-203ENST00000524463 RAD21O60216 631 aa13.33□□□□□ -0.27
CTSC-203ENST00000524463 NGEFQ8N5V2 710 aa13.33□□□□□ -0.27
CTSC-203ENST00000524463 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.27
CTSC-203ENST00000524463 MYO15BQ96JP2 1530 aa13.33□□□□□ -0.28
CTSC-203ENST00000524463 KIAA1211Q6ZU35 1233 aa13.33□□□□□ -0.28
CTSC-203ENST00000524463 MEX3CQ5U5Q3 659 aaKnown RBP13.33□□□□□ -0.28
CTSC-203ENST00000524463 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
CTSC-203ENST00000524463 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
CTSC-203ENST00000524463 TRIM6-TRIM34B2RNG4 842 aa13.31□□□□□ -0.28
CTSC-203ENST00000524463 KIF3BO15066 747 aa13.31□□□□□ -0.28
CTSC-203ENST00000524463 GZF1Q9H116 711 aaPredicted RBP13.31□□□□□ -0.28
CTSC-203ENST00000524463 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
CTSC-203ENST00000524463 HSPA5P11021 654 aaKnown RBP13.3□□□□□ -0.28
CTSC-203ENST00000524463 HNRNPMP52272 730 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTSC-203ENST00000524463 MS4A1P11836 297 aa13.3□□□□□ -0.28
CTSC-203ENST00000524463 AMPHP49418 695 aa13.29□□□□□ -0.28
CTSC-203ENST00000524463 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
CTSC-203ENST00000524463 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
CTSC-203ENST00000524463 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
CTSC-203ENST00000524463 EVA1CP58658 441 aa13.29□□□□□ -0.28
CTSC-203ENST00000524463 RASSF8Q8NHQ8 419 aa13.29□□□□□ -0.28
CTSC-203ENST00000524463 NOC3LQ8WTT2 800 aaKnown RBP13.29□□□□□ -0.28
CTSC-203ENST00000524463 PPP4R2Q9NY27 417 aa13.29□□□□□ -0.28
CTSC-203ENST00000524463 SYTL4Q96C24 671 aaPredicted RBP13.28□□□□□ -0.28
CTSC-203ENST00000524463 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
CTSC-203ENST00000524463 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
CTSC-203ENST00000524463 ROCK2O75116 1388 aaKnown RBP13.28□□□□□ -0.28
CTSC-203ENST00000524463 CUX2O14529 1486 aa13.27□□□□□ -0.29
CTSC-203ENST00000524463 NOP58Q9Y2X3 529 aaKnown RBP13.26□□□□□ -0.29
CTSC-203ENST00000524463 NRDCO43847 1150 aa13.26□□□□□ -0.29
CTSC-203ENST00000524463 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
CTSC-203ENST00000524463 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
CTSC-203ENST00000524463 STK31Q9BXU1 1019 aa13.25□□□□□ -0.29
CTSC-203ENST00000524463 MFAP1P55081 439 aaKnown RBP13.25□□□□□ -0.29
CTSC-203ENST00000524463 KIAA2012Q0VF49 1180 aa13.25□□□□□ -0.29
CTSC-203ENST00000524463 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
CTSC-203ENST00000524463 ELL2O00472 640 aaPredicted RBP13.24□□□□□ -0.29
CTSC-203ENST00000524463 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
CTSC-203ENST00000524463 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
CTSC-203ENST00000524463 WASHC2CQ9Y4E1 1318 aa13.24□□□□□ -0.29
CTSC-203ENST00000524463 SPAG9O60271 1321 aaKnown RBP13.23□□□□□ -0.29
CTSC-203ENST00000524463 MARCH6O60337 910 aa13.23□□□□□ -0.29
CTSC-203ENST00000524463 CARMIL1Q5VZK9 1371 aa13.23□□□□□ -0.29
CTSC-203ENST00000524463 CYB5RLQ6IPT4 315 aa13.22□□□□□ -0.29
CTSC-203ENST00000524463 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
CTSC-203ENST00000524463 EEA1Q15075 1411 aa13.22□□□□□ -0.29
CTSC-203ENST00000524463 KTN1Q86UP2 1357 aaKnown RBP13.22□□□□□ -0.29
CTSC-203ENST00000524463 NUP155O75694 1391 aa13.2□□□□□ -0.3
CTSC-203ENST00000524463 IPO8O15397 1037 aaKnown RBP13.2□□□□□ -0.3
CTSC-203ENST00000524463 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
CTSC-203ENST00000524463 CHAF1AQ13111 956 aaPredicted RBP13.2□□□□□ -0.3
CTSC-203ENST00000524463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
CTSC-203ENST00000524463 FOXD4L6Q3SYB3 417 aaPredicted RBP13.19□□□□□ -0.3
CTSC-203ENST00000524463 FOXD4L3Q6VB84 417 aaPredicted RBP13.19□□□□□ -0.3
CTSC-203ENST00000524463 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
CTSC-203ENST00000524463 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
CTSC-203ENST00000524463 CECR2Q9BXF3 1484 aa13.18□□□□□ -0.3
CTSC-203ENST00000524463 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
CTSC-203ENST00000524463 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
CTSC-203ENST00000524463 KANK4Q5T7N3 995 aaPredicted RBP13.18□□□□□ -0.3
CTSC-203ENST00000524463 EIF2S2P20042 333 aaKnown RBP13.17□□□□□ -0.3
CTSC-203ENST00000524463 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
CTSC-203ENST00000524463 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
CTSC-203ENST00000524463 EFCAB2Q5VUJ9 269 aa13.16□□□□□ -0.3
CTSC-203ENST00000524463 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms