RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 WDR62O43379 1518 aa9.88□□□□□ -0.83
CTNNA1-239ENST00000523685 FANCD2Q9BXW9 1451 aa9.87□□□□□ -0.83
CTNNA1-239ENST00000523685 PPP1R37O75864 691 aa9.85□□□□□ -0.83
CTNNA1-239ENST00000523685 GABBR2O75899 941 aa9.83□□□□□ -0.84
CTNNA1-239ENST00000523685 TRIM35Q9UPQ4 493 aa9.83□□□□□ -0.84
CTNNA1-239ENST00000523685 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-239ENST00000523685 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
CTNNA1-239ENST00000523685 CFTRP13569 1480 aa9.82□□□□□ -0.84
CTNNA1-239ENST00000523685 BCANQ96GW7 911 aa9.81□□□□□ -0.84
CTNNA1-239ENST00000523685 ATMINO43313 823 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-239ENST00000523685 ATN1P54259 1190 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-239ENST00000523685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.8□□□□□ -0.844e-8■■□□□ 11.9
CTNNA1-239ENST00000523685 ASTLQ6HA08 431 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-239ENST00000523685 CADPS2Q86UW7 1296 aa9.79□□□□□ -0.84
CTNNA1-239ENST00000523685 TOP2AP11388 1531 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-239ENST00000523685 URB2Q14146 1524 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-239ENST00000523685 ILDR1Q86SU0 546 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-239ENST00000523685 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
CTNNA1-239ENST00000523685 WDR70Q9NW82 654 aa9.75□□□□□ -0.85
CTNNA1-239ENST00000523685 IER5LQ5T953 404 aa9.73□□□□□ -0.85
CTNNA1-239ENST00000523685 IRX5P78411 483 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-239ENST00000523685 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
CTNNA1-239ENST00000523685 OCEL1Q9H607 264 aa9.7□□□□□ -0.86
CTNNA1-239ENST00000523685 CCDC88BA6NC98 1476 aa9.7□□□□□ -0.86
CTNNA1-239ENST00000523685 ZNF608Q9ULD9 1512 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-239ENST00000523685 PDCD7Q8N8D1 485 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-239ENST00000523685 IFT140Q96RY7 1462 aa9.68□□□□□ -0.86
CTNNA1-239ENST00000523685 PDE4AP27815 886 aa9.68□□□□□ -0.86
CTNNA1-239ENST00000523685 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-239ENST00000523685 SP7Q8TDD2 431 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-239ENST00000523685 PLCG2P16885 1265 aa9.66□□□□□ -0.86
CTNNA1-239ENST00000523685 NBR1Q14596 966 aa9.66□□□□□ -0.86
CTNNA1-239ENST00000523685 P3H3Q8IVL6 736 aa9.66□□□□□ -0.86
CTNNA1-239ENST00000523685 TOPBP1Q92547 1522 aa9.66□□□□□ -0.86
CTNNA1-239ENST00000523685 NCKAP5LQ9HCH0 1330 aa9.65□□□□□ -0.86
CTNNA1-239ENST00000523685 LARP6Q9BRS8 491 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-239ENST00000523685 RIMBP3CA6NJZ7 1639 aa9.64□□□□□ -0.87
CTNNA1-239ENST00000523685 RIMBP3BA6NNM3 1639 aa9.64□□□□□ -0.87
CTNNA1-239ENST00000523685 RIMBP3Q9UFD9 1639 aa9.64□□□□□ -0.87
CTNNA1-239ENST00000523685 SEC24BO95487 1268 aa9.64□□□□□ -0.87
CTNNA1-239ENST00000523685 SLC39A7Q92504 469 aa9.64□□□□□ -0.87
CTNNA1-239ENST00000523685 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
CTNNA1-239ENST00000523685 PRDM2Q13029 1718 aa9.63□□□□□ -0.87
CTNNA1-239ENST00000523685 CYB5RLQ6IPT4 315 aa9.63□□□□□ -0.87
CTNNA1-239ENST00000523685 MICALL2Q8IY33 904 aa9.63□□□□□ -0.87
CTNNA1-239ENST00000523685 ARHGEF11O15085 1522 aa9.62□□□□□ -0.87
CTNNA1-239ENST00000523685 G3V3G9 751 aa9.62□□□□□ -0.87
CTNNA1-239ENST00000523685 C7P10643 843 aa9.62□□□□□ -0.87
CTNNA1-239ENST00000523685 AQRO60306 1485 aaKnown RBP eCLIP9.61□□□□□ -0.878e-7■■■■■ 28.7
CTNNA1-239ENST00000523685 POTEIP0CG38 1075 aa9.61□□□□□ -0.87
CTNNA1-239ENST00000523685 L3MBTL3Q96JM7 780 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-239ENST00000523685 BOLA1Q9Y3E2 137 aa9.61□□□□□ -0.87
CTNNA1-239ENST00000523685 EIF4G3O43432 1585 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-239ENST00000523685 ABCC8Q09428 1581 aa9.6□□□□□ -0.87
CTNNA1-239ENST00000523685 MFSD10Q14728 455 aa9.6□□□□□ -0.87
CTNNA1-239ENST00000523685 E2F4Q16254 413 aa9.6□□□□□ -0.87
CTNNA1-239ENST00000523685 KCNV2Q8TDN2 545 aa9.6□□□□□ -0.87
CTNNA1-239ENST00000523685 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-239ENST00000523685 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-239ENST00000523685 DNMBPQ6XZF7 1577 aa9.59□□□□□ -0.87
CTNNA1-239ENST00000523685 DDX27Q96GQ7 796 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-239ENST00000523685 GPHNQ9NQX3 736 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-239ENST00000523685 METRNQ9UJH8 293 aa9.57□□□□□ -0.88
CTNNA1-239ENST00000523685 POLA1P09884 1462 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-239ENST00000523685 RAD54L2Q9Y4B4 1467 aa9.56□□□□□ -0.88
CTNNA1-239ENST00000523685 TDRD9Q8NDG6 1382 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-239ENST00000523685 POTEFA5A3E0 1075 aa9.56□□□□□ -0.88
CTNNA1-239ENST00000523685 ARHGEF1Q92888 912 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-239ENST00000523685 TMC2Q8TDI7 906 aa9.55□□□□□ -0.88
CTNNA1-239ENST00000523685 TARBP1Q13395 1621 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-239ENST00000523685 SOGA1O94964 1423 aa9.54□□□□□ -0.88
CTNNA1-239ENST00000523685 CHD1O14646 1710 aa9.53□□□□□ -0.88
CTNNA1-239ENST00000523685 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
CTNNA1-239ENST00000523685 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
CTNNA1-239ENST00000523685 CAMK2BQ13554 666 aa9.51□□□□□ -0.89
CTNNA1-239ENST00000523685 CHMP7Q8WUX9 453 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-239ENST00000523685 FOXK1P85037 733 aa9.5□□□□□ -0.89
CTNNA1-239ENST00000523685 DSG2Q14126 1118 aa9.5□□□□□ -0.89
CTNNA1-239ENST00000523685 SNAPC4Q5SXM2 1469 aa9.5□□□□□ -0.89
CTNNA1-239ENST00000523685 FGD5Q6ZNL6 1462 aa9.49□□□□□ -0.89
CTNNA1-239ENST00000523685 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
CTNNA1-239ENST00000523685 KIF3CO14782 793 aa9.48□□□□□ -0.89
CTNNA1-239ENST00000523685 ARIH1Q9Y4X5 557 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-239ENST00000523685 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
CTNNA1-239ENST00000523685 PLPP6Q8IY26 295 aa9.46□□□□□ -0.9
CTNNA1-239ENST00000523685 CUX1P39880 1505 aa9.46□□□□□ -0.9
CTNNA1-239ENST00000523685 PRKCSHP14314 528 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-239ENST00000523685 TMEM92Q6UXU6 159 aa9.45□□□□□ -0.9
CTNNA1-239ENST00000523685 C3orf67Q6ZVT6 689 aa9.45□□□□□ -0.9
CTNNA1-239ENST00000523685 GRIN2BQ13224 1484 aa9.44□□□□□ -0.9
CTNNA1-239ENST00000523685 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
CTNNA1-239ENST00000523685 MAGI1Q96QZ7 1491 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-239ENST00000523685 SUPT5HO00267 1087 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-239ENST00000523685 CLASP1Q7Z460 1538 aa9.42□□□□□ -0.9
CTNNA1-239ENST00000523685 SYNJ2O15056 1496 aa9.42□□□□□ -0.9
CTNNA1-239ENST00000523685 EMILIN3Q9NT22 766 aa9.42□□□□□ -0.9
CTNNA1-239ENST00000523685 SEMA3EO15041 775 aa9.41□□□□□ -0.9
CTNNA1-239ENST00000523685 GAPVD1Q14C86 1478 aa9.4□□□□□ -0.9
CTNNA1-239ENST00000523685 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-239ENST00000523685 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms