RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 PHF8Q9UPP1 1060 aa10.45□□□□□ -0.74
PCM1-217ENST00000522998 GPR153Q6NV75 609 aa10.4□□□□□ -0.74
PCM1-217ENST00000522998 RNF166Q96A37 237 aaPredicted RBP10.39□□□□□ -0.75
PCM1-217ENST00000522998 ZNF687Q8N1G0 1237 aa10.38□□□□□ -0.75
PCM1-217ENST00000522998 NLRP6P59044 892 aa10.37□□□□□ -0.75
PCM1-217ENST00000522998 MYT1LQ9UL68 1186 aa10.36□□□□□ -0.75
PCM1-217ENST00000522998 ARSIQ5FYB1 569 aa10.35□□□□□ -0.75
PCM1-217ENST00000522998 TAOK2Q9UL54 1235 aa10.35□□□□□ -0.75
PCM1-217ENST00000522998 BCL11BQ9C0K0 894 aaPredicted RBP10.34□□□□□ -0.75
PCM1-217ENST00000522998 FBXO22Q8NEZ5 403 aa10.32□□□□□ -0.76
PCM1-217ENST00000522998 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
PCM1-217ENST00000522998 PTGER2P43116 358 aa10.29□□□□□ -0.76
PCM1-217ENST00000522998 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.76
PCM1-217ENST00000522998 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
PCM1-217ENST00000522998 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
PCM1-217ENST00000522998 MFRPQ9BY79 579 aa10.27□□□□□ -0.77
PCM1-217ENST00000522998 STK25O00506 426 aa10.25□□□□□ -0.77
PCM1-217ENST00000522998 C2orf72A6NCS6 295 aa10.23□□□□□ -0.77
PCM1-217ENST00000522998 KIF3CO14782 793 aa10.22□□□□□ -0.77
PCM1-217ENST00000522998 LSM11P83369 360 aaKnown RBP eCLIP10.21□□□□□ -0.77
PCM1-217ENST00000522998 ECM2O94769 699 aaPredicted RBP10.2□□□□□ -0.78
PCM1-217ENST00000522998 NUDT7P0C024 238 aa10.2□□□□□ -0.78
PCM1-217ENST00000522998 PBX2P40425 430 aa10.17□□□□□ -0.78
PCM1-217ENST00000522998 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
PCM1-217ENST00000522998 PCDHGA4Q9Y5G9 962 aa10.16□□□□□ -0.78
PCM1-217ENST00000522998 SLC34A2O95436 690 aa10.15□□□□□ -0.78
PCM1-217ENST00000522998 LHX6Q9UPM6 363 aa10.15□□□□□ -0.78
PCM1-217ENST00000522998 AXIN2Q9Y2T1 843 aa10.12□□□□□ -0.79
PCM1-217ENST00000522998 RGL2O15211 777 aa10.11□□□□□ -0.79
PCM1-217ENST00000522998 POTEEQ6S8J3 1075 aa10.1□□□□□ -0.79
PCM1-217ENST00000522998 PKD2Q13563 968 aa10.08□□□□□ -0.8
PCM1-217ENST00000522998 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
PCM1-217ENST00000522998 PPP1R37O75864 691 aa10.06□□□□□ -0.8
PCM1-217ENST00000522998 ARHGAP33O14559 1287 aa10.04□□□□□ -0.8
PCM1-217ENST00000522998 ADGRD1Q6QNK2 874 aa10.03□□□□□ -0.8
PCM1-217ENST00000522998 HCSTQ9UBK5 93 aa10.03□□□□□ -0.8
PCM1-217ENST00000522998 PTCD2Q8WV60 388 aaKnown RBP10.01□□□□□ -0.81
PCM1-217ENST00000522998 PLA2G2EQ9NZK7 142 aa10□□□□□ -0.81
PCM1-217ENST00000522998 KDM4FA0A1W2PPD8 638 aa9.99□□□□□ -0.81
PCM1-217ENST00000522998 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
PCM1-217ENST00000522998 TK2O00142 265 aa9.97□□□□□ -0.81
PCM1-217ENST00000522998 FOXK1P85037 733 aa9.97□□□□□ -0.81
PCM1-217ENST00000522998 PSEN2P49810 448 aa9.96□□□□□ -0.82
PCM1-217ENST00000522998 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
PCM1-217ENST00000522998 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
PCM1-217ENST00000522998 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
PCM1-217ENST00000522998 TBC1D12O60347 775 aa9.94□□□□□ -0.82
PCM1-217ENST00000522998 HRO43593 1189 aa9.93□□□□□ -0.82
PCM1-217ENST00000522998 DSG2Q14126 1118 aa9.92□□□□□ -0.82
PCM1-217ENST00000522998 HS6ST3Q8IZP7 471 aa9.92□□□□□ -0.82
PCM1-217ENST00000522998 KCNH8Q96L42 1107 aa9.91□□□□□ -0.82
PCM1-217ENST00000522998 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
PCM1-217ENST00000522998 KCTD12Q96CX2 325 aaKnown RBP9.9□□□□□ -0.82
PCM1-217ENST00000522998 KCNK17Q96T54 332 aa9.89□□□□□ -0.83
PCM1-217ENST00000522998 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
PCM1-217ENST00000522998 OXER1Q8TDS5 423 aa9.83□□□□□ -0.84
PCM1-217ENST00000522998 UPF1Q92900 1129 aaKnown RBP eCLIP9.83□□□□□ -0.84
PCM1-217ENST00000522998 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
PCM1-217ENST00000522998 VPS9D1Q9Y2B5 631 aa9.82□□□□□ -0.84
PCM1-217ENST00000522998 BCL2L12Q9HB09 334 aa9.79□□□□□ -0.84
PCM1-217ENST00000522998 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
PCM1-217ENST00000522998 PTPN5P54829 565 aa9.78□□□□□ -0.84
PCM1-217ENST00000522998 CRISPLD2Q9H0B8 497 aa9.78□□□□□ -0.84
PCM1-217ENST00000522998 NKX1-1Q15270 411 aaPredicted RBP9.77□□□□□ -0.85
PCM1-217ENST00000522998 PPP1R15BQ5SWA1 713 aa9.77□□□□□ -0.85
PCM1-217ENST00000522998 SLC4A5Q9BY07 1137 aa9.77□□□□□ -0.85
PCM1-217ENST00000522998 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
PCM1-217ENST00000522998 PTPREP23469 700 aa9.75□□□□□ -0.85
PCM1-217ENST00000522998 FOSBP53539 338 aa9.75□□□□□ -0.85
PCM1-217ENST00000522998 GOLGA8CPA6NN73 597 aa9.73□□□□□ -0.85
PCM1-217ENST00000522998 THSD4Q6ZMP0 1018 aa9.72□□□□□ -0.85
PCM1-217ENST00000522998 BHMG1C9JSJ3 638 aaPredicted RBP9.71□□□□□ -0.86
PCM1-217ENST00000522998 PDE4AP27815 886 aa9.71□□□□□ -0.86
PCM1-217ENST00000522998 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
PCM1-217ENST00000522998 ZBED2Q9BTP6 218 aa9.71□□□□□ -0.86
PCM1-217ENST00000522998 MRPL50Q8N5N7 158 aaKnown RBP9.7□□□□□ -0.86
PCM1-217ENST00000522998 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
PCM1-217ENST00000522998 EVI5O60447 810 aa9.69□□□□□ -0.86
PCM1-217ENST00000522998 WNT2BQ93097 391 aa9.69□□□□□ -0.86
PCM1-217ENST00000522998 ANO8Q9HCE9 1232 aaPredicted RBP9.69□□□□□ -0.86
PCM1-217ENST00000522998 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
PCM1-217ENST00000522998 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
PCM1-217ENST00000522998 RGS20O76081 388 aa9.67□□□□□ -0.86
PCM1-217ENST00000522998 ADAM33Q9BZ11 813 aa9.67□□□□□ -0.86
PCM1-217ENST00000522998 NBPF3Q9H094 633 aa9.67□□□□□ -0.86
PCM1-217ENST00000522998 LARP6Q9BRS8 491 aaKnown RBP9.65□□□□□ -0.86
PCM1-217ENST00000522998 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
PCM1-217ENST00000522998 A0A0G2JS52 829 aa9.63□□□□□ -0.87
PCM1-217ENST00000522998 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
PCM1-217ENST00000522998 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
PCM1-217ENST00000522998 GTPBP6O43824 516 aaPredicted RBP9.6□□□□□ -0.87
PCM1-217ENST00000522998 PPP1R3GB7ZBB8 358 aa9.59□□□□□ -0.87
PCM1-217ENST00000522998 MFSD10Q14728 455 aa9.59□□□□□ -0.87
PCM1-217ENST00000522998 ANKK1Q8NFD2 765 aa9.58□□□□□ -0.88
PCM1-217ENST00000522998 RABGEF1Q9UJ41 708 aa9.58□□□□□ -0.88
PCM1-217ENST00000522998 EMILIN3Q9NT22 766 aa9.57□□□□□ -0.88
PCM1-217ENST00000522998 PCDHGA10Q9Y5H3 936 aa9.57□□□□□ -0.88
PCM1-217ENST00000522998 PROX2Q3B8N5 592 aa9.56□□□□□ -0.88
PCM1-217ENST00000522998 FBXW7Q969H0 707 aa9.55□□□□□ -0.88
PCM1-217ENST00000522998 COL9A1P20849 921 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms