RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 CHGAP10645 457 aaKnown RBP15.31■□□□□ 0.04
SGCE-211ENST00000522045 HOXB1P14653 301 aaPredicted RBP15.26■□□□□ 0.03
SGCE-211ENST00000522045 FAM205CA6NFA0 338 aa15.22■□□□□ 0.03
SGCE-211ENST00000522045 ZSWIM6Q9HCJ5 1215 aa15.22■□□□□ 0.03
SGCE-211ENST00000522045 PPP1R37O75864 691 aa15.21■□□□□ 0.03
SGCE-211ENST00000522045 HS3ST6Q96QI5 342 aa15.21■□□□□ 0.03
SGCE-211ENST00000522045 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
SGCE-211ENST00000522045 C2orf72A6NCS6 295 aa15.18■□□□□ 0.02
SGCE-211ENST00000522045 KIF3CO14782 793 aa15.18■□□□□ 0.02
SGCE-211ENST00000522045 TMC2Q8TDI7 906 aa15.16■□□□□ 0.02
SGCE-211ENST00000522045 POTEB3A0JP26 581 aa15.13■□□□□ 0.01
SGCE-211ENST00000522045 POTEBQ6S5H4 581 aa15.13■□□□□ 0.01
SGCE-211ENST00000522045 RYDENQ9NUL5 291 aaKnown RBP15.13■□□□□ 0.01
SGCE-211ENST00000522045 ERBB3P21860 1342 aa15.13■□□□□ 0.01
SGCE-211ENST00000522045 NKX1-1Q15270 411 aaPredicted RBP15.12■□□□□ 0.01
SGCE-211ENST00000522045 GPR153Q6NV75 609 aa15.12■□□□□ 0.01
SGCE-211ENST00000522045 DCAF8L2P0C7V8 631 aa15.1■□□□□ 0.01
SGCE-211ENST00000522045 ARSIQ5FYB1 569 aa15.07■□□□□ 0
SGCE-211ENST00000522045 VARS2Q5ST30 1063 aaKnown RBP15.04■□□□□ -0
SGCE-211ENST00000522045 KRTAP3-3Q9BYR6 98 aa15.03■□□□□ -0
SGCE-211ENST00000522045 KRTAP3-2Q9BYR7 98 aa15.03■□□□□ -0
SGCE-211ENST00000522045 SLC34A2O95436 690 aa15.01□□□□□ -0.01
SGCE-211ENST00000522045 SPNS2Q8IVW8 549 aa14.99□□□□□ -0.01
SGCE-211ENST00000522045 KHSRPQ92945 711 aaKnown RBP eCLIP14.99□□□□□ -0.01
SGCE-211ENST00000522045 GPHNQ9NQX3 736 aaPredicted RBP14.97□□□□□ -0.01
SGCE-211ENST00000522045 FOXK1P85037 733 aa14.96□□□□□ -0.01
SGCE-211ENST00000522045 PCDHGA4Q9Y5G9 962 aa14.95□□□□□ -0.02
SGCE-211ENST00000522045 ZNF316A6NFI3 1004 aaPredicted RBP14.94□□□□□ -0.02
SGCE-211ENST00000522045 NUDT7P0C024 238 aa14.93□□□□□ -0.02
SGCE-211ENST00000522045 ZNF687Q8N1G0 1237 aa14.93□□□□□ -0.02
SGCE-211ENST00000522045 GTPBP6O43824 516 aaPredicted RBP14.92□□□□□ -0.02
SGCE-211ENST00000522045 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
SGCE-211ENST00000522045 PLPP6Q8IY26 295 aa14.92□□□□□ -0.02
SGCE-211ENST00000522045 DSG2Q14126 1118 aa14.9□□□□□ -0.02
SGCE-211ENST00000522045 AMER1Q5JTC6 1135 aaPredicted RBP14.86□□□□□ -0.03
SGCE-211ENST00000522045 PTCD2Q8WV60 388 aaKnown RBP14.85□□□□□ -0.03
SGCE-211ENST00000522045 CRISPLD2Q9H0B8 497 aa14.85□□□□□ -0.03
SGCE-211ENST00000522045 LHX6Q9UPM6 363 aa14.84□□□□□ -0.03
SGCE-211ENST00000522045 PDE4AP27815 886 aa14.8□□□□□ -0.04
SGCE-211ENST00000522045 TBC1D12O60347 775 aa14.79□□□□□ -0.04
SGCE-211ENST00000522045 NCKAP5LQ9HCH0 1330 aa14.78□□□□□ -0.04
SGCE-211ENST00000522045 PPP1R15BQ5SWA1 713 aa14.78□□□□□ -0.04
SGCE-211ENST00000522045 PSDA5PKW4 1024 aaPredicted RBP14.76□□□□□ -0.05
SGCE-211ENST00000522045 KDM4FA0A1W2PPD8 638 aa14.75□□□□□ -0.05
SGCE-211ENST00000522045 PBX2P40425 430 aa14.74□□□□□ -0.05
SGCE-211ENST00000522045 RTN4Q9NQC3 1192 aaKnown RBP14.72□□□□□ -0.05
SGCE-211ENST00000522045 OXER1Q8TDS5 423 aa14.71□□□□□ -0.05
SGCE-211ENST00000522045 BBXQ8WY36 941 aaPredicted RBP14.71□□□□□ -0.05
SGCE-211ENST00000522045 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.05
SGCE-211ENST00000522045 LARP6Q9BRS8 491 aaKnown RBP14.71□□□□□ -0.05
SGCE-211ENST00000522045 LSM11P83369 360 aaKnown RBP eCLIP14.7□□□□□ -0.06
SGCE-211ENST00000522045 DDX27Q96GQ7 796 aaKnown RBP14.7□□□□□ -0.06
SGCE-211ENST00000522045 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
SGCE-211ENST00000522045 PTGER2P43116 358 aa14.67□□□□□ -0.06
SGCE-211ENST00000522045 MFSD10Q14728 455 aa14.65□□□□□ -0.06
SGCE-211ENST00000522045 PPP4R3BQ5MIZ7 849 aa14.65□□□□□ -0.06
SGCE-211ENST00000522045 POTEEQ6S8J3 1075 aa14.64□□□□□ -0.07
SGCE-211ENST00000522045 RNF166Q96A37 237 aaPredicted RBP14.64□□□□□ -0.07
SGCE-211ENST00000522045 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
SGCE-211ENST00000522045 AXIN2Q9Y2T1 843 aa14.64□□□□□ -0.07
SGCE-211ENST00000522045 CADPS2Q86UW7 1296 aa14.62□□□□□ -0.07
SGCE-211ENST00000522045 ARHGAP33O14559 1287 aa14.61□□□□□ -0.07
SGCE-211ENST00000522045 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.59□□□□□ -0.07
SGCE-211ENST00000522045 SPRYD3Q8NCJ5 442 aa14.55□□□□□ -0.08
SGCE-211ENST00000522045 ZNF454Q8N9F8 522 aa14.54□□□□□ -0.08
SGCE-211ENST00000522045 EVI5O60447 810 aa14.53□□□□□ -0.08
SGCE-211ENST00000522045 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
SGCE-211ENST00000522045 KCNH8Q96L42 1107 aa14.53□□□□□ -0.08
SGCE-211ENST00000522045 PSEN2P49810 448 aa14.51□□□□□ -0.09
SGCE-211ENST00000522045 ADGRD1Q6QNK2 874 aa14.51□□□□□ -0.09
SGCE-211ENST00000522045 ANO8Q9HCE9 1232 aaPredicted RBP14.51□□□□□ -0.09
SGCE-211ENST00000522045 EMILIN3Q9NT22 766 aa14.51□□□□□ -0.09
SGCE-211ENST00000522045 TK2O00142 265 aa14.48□□□□□ -0.09
SGCE-211ENST00000522045 FOSBP53539 338 aa14.48□□□□□ -0.09
SGCE-211ENST00000522045 DMRTA1Q5VZB9 504 aa14.48□□□□□ -0.09
SGCE-211ENST00000522045 KCNK17Q96T54 332 aa14.48□□□□□ -0.09
SGCE-211ENST00000522045 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
SGCE-211ENST00000522045 BCL2L12Q9HB09 334 aa14.45□□□□□ -0.1
SGCE-211ENST00000522045 CAMK2BQ13554 666 aa14.44□□□□□ -0.1
SGCE-211ENST00000522045 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
SGCE-211ENST00000522045 CFAP44Q96MT7 982 aa14.43□□□□□ -0.1
SGCE-211ENST00000522045 ZDHHC16Q969W1 377 aa14.41□□□□□ -0.1
SGCE-211ENST00000522045 PTPREP23469 700 aa14.4□□□□□ -0.1
SGCE-211ENST00000522045 HRO43593 1189 aa14.38□□□□□ -0.11
SGCE-211ENST00000522045 DPYSL4O14531 572 aa14.35□□□□□ -0.11
SGCE-211ENST00000522045 STAC3Q96MF2 364 aa14.35□□□□□ -0.11
SGCE-211ENST00000522045 ADAM33Q9BZ11 813 aa14.35□□□□□ -0.11
SGCE-211ENST00000522045 VPS9D1Q9Y2B5 631 aa14.34□□□□□ -0.11
SGCE-211ENST00000522045 SLC4A5Q9BY07 1137 aa14.33□□□□□ -0.12
SGCE-211ENST00000522045 PCDHGA10Q9Y5H3 936 aa14.33□□□□□ -0.12
SGCE-211ENST00000522045 PHF14O94880 888 aa14.31□□□□□ -0.12
SGCE-211ENST00000522045 FBXW7Q969H0 707 aa14.3□□□□□ -0.12
SGCE-211ENST00000522045 TYW1BQ6NUM6 668 aa14.29□□□□□ -0.12
SGCE-211ENST00000522045 ZBED2Q9BTP6 218 aa14.29□□□□□ -0.12
SGCE-211ENST00000522045 WDR70Q9NW82 654 aa14.27□□□□□ -0.13
SGCE-211ENST00000522045 HCSTQ9UBK5 93 aa14.27□□□□□ -0.13
SGCE-211ENST00000522045 PPP1R3GB7ZBB8 358 aa14.25□□□□□ -0.13
SGCE-211ENST00000522045 EPAS1Q99814 870 aa14.25□□□□□ -0.13
SGCE-211ENST00000522045 E2F4Q16254 413 aa14.24□□□□□ -0.13
SGCE-211ENST00000522045 KCTD12Q96CX2 325 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms