RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
SLIT3-206ENST00000519560 B4GALNT3Q6L9W6 998 aa17.4■□□□□ 0.38
SLIT3-206ENST00000519560 PRM3Q9NNZ6 103 aa17.4■□□□□ 0.38
SLIT3-206ENST00000519560 POGKQ9P215 609 aa17.4■□□□□ 0.38
SLIT3-206ENST00000519560 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
SLIT3-206ENST00000519560 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
SLIT3-206ENST00000519560 LMOD2Q6P5Q4 547 aa17.38■□□□□ 0.37
SLIT3-206ENST00000519560 SETQ01105 290 aaPredicted RBP17.37■□□□□ 0.37
SLIT3-206ENST00000519560 CC2D1BQ5T0F9 858 aaKnown RBP17.37■□□□□ 0.37
SLIT3-206ENST00000519560 CCDC34Q96HJ3 373 aa17.37■□□□□ 0.37
SLIT3-206ENST00000519560 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
SLIT3-206ENST00000519560 CCER2I3L3R5 266 aa17.33■□□□□ 0.37
SLIT3-206ENST00000519560 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.32■□□□□ 0.36
SLIT3-206ENST00000519560 PHF14O94880 888 aa17.32■□□□□ 0.36
SLIT3-206ENST00000519560 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
SLIT3-206ENST00000519560 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
SLIT3-206ENST00000519560 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
SLIT3-206ENST00000519560 KCNH8Q96L42 1107 aa17.3■□□□□ 0.36
SLIT3-206ENST00000519560 GOLGA6L3A6NEY3 463 aa17.3■□□□□ 0.36
SLIT3-206ENST00000519560 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
SLIT3-206ENST00000519560 IPO8O15397 1037 aaKnown RBP17.29■□□□□ 0.36
SLIT3-206ENST00000519560 GPATCH3Q96I76 525 aa17.27■□□□□ 0.36
SLIT3-206ENST00000519560 CFDP1Q9UEE9 299 aaPredicted RBP17.26■□□□□ 0.35
SLIT3-206ENST00000519560 SLKQ9H2G2 1235 aaPredicted RBP17.26■□□□□ 0.35
SLIT3-206ENST00000519560 TPM3P06753 285 aa17.25■□□□□ 0.35
SLIT3-206ENST00000519560 RTF1Q92541 710 aaKnown RBP17.25■□□□□ 0.35
SLIT3-206ENST00000519560 HSP90B1P14625 803 aaKnown RBP17.25■□□□□ 0.35
SLIT3-206ENST00000519560 TMF1P82094 1093 aa17.24■□□□□ 0.35
SLIT3-206ENST00000519560 PDE4CQ08493 712 aa17.24■□□□□ 0.35
SLIT3-206ENST00000519560 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
SLIT3-206ENST00000519560 CALRP27797 417 aaKnown RBP17.23■□□□□ 0.35
SLIT3-206ENST00000519560 KANK1Q14678 1352 aa17.23■□□□□ 0.35
SLIT3-206ENST00000519560 APBB1O00213 710 aa17.23■□□□□ 0.35
SLIT3-206ENST00000519560 CEP89Q96ST8 783 aa17.23■□□□□ 0.35
SLIT3-206ENST00000519560 CALD1Q05682 793 aaKnown RBP17.22■□□□□ 0.35
SLIT3-206ENST00000519560 RASSF8Q8NHQ8 419 aa17.22■□□□□ 0.35
SLIT3-206ENST00000519560 HSP90AA2PQ14568 343 aaPredicted RBP17.22■□□□□ 0.35
SLIT3-206ENST00000519560 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.35
SLIT3-206ENST00000519560 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
SLIT3-206ENST00000519560 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
SLIT3-206ENST00000519560 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
SLIT3-206ENST00000519560 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
SLIT3-206ENST00000519560 CREBRFQ8IUR6 639 aa17.17■□□□□ 0.34
SLIT3-206ENST00000519560 ARHGAP35Q9NRY4 1499 aa17.17■□□□□ 0.34
SLIT3-206ENST00000519560 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
SLIT3-206ENST00000519560 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
SLIT3-206ENST00000519560 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
SLIT3-206ENST00000519560 CCDC70Q6NSX1 233 aa17.15■□□□□ 0.34
SLIT3-206ENST00000519560 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
SLIT3-206ENST00000519560 TOP2AP11388 1531 aaKnown RBP17.15■□□□□ 0.34
SLIT3-206ENST00000519560 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
SLIT3-206ENST00000519560 GPS2Q13227 327 aa17.14■□□□□ 0.33
SLIT3-206ENST00000519560 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
SLIT3-206ENST00000519560 TSR1Q2NL82 804 aaKnown RBP17.13■□□□□ 0.33
SLIT3-206ENST00000519560 GORABQ5T7V8 394 aa17.13■□□□□ 0.33
SLIT3-206ENST00000519560 DDX11L8A8MPP1 907 aa17.13■□□□□ 0.33
SLIT3-206ENST00000519560 MFAP1P55081 439 aaKnown RBP17.12■□□□□ 0.33
SLIT3-206ENST00000519560 KIF16BQ96L93 1317 aa17.12■□□□□ 0.33
SLIT3-206ENST00000519560 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
SLIT3-206ENST00000519560 SOX12O15370 315 aa17.12■□□□□ 0.33
SLIT3-206ENST00000519560 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
SLIT3-206ENST00000519560 RCAN3Q9UKA8 241 aa17.11■□□□□ 0.33
SLIT3-206ENST00000519560 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
SLIT3-206ENST00000519560 ST18O60284 1047 aa17.11■□□□□ 0.33
SLIT3-206ENST00000519560 HMMRO75330 724 aa17.1■□□□□ 0.33
SLIT3-206ENST00000519560 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
SLIT3-206ENST00000519560 DCAF11Q8TEB1 546 aa17.09■□□□□ 0.33
SLIT3-206ENST00000519560 IPO9Q96P70 1041 aaKnown RBP17.09■□□□□ 0.33
SLIT3-206ENST00000519560 HDGFP51858 240 aaKnown RBP17.08■□□□□ 0.33
SLIT3-206ENST00000519560 PES1O00541 588 aaKnown RBP17.08■□□□□ 0.33
SLIT3-206ENST00000519560 TPM1P09493 284 aa17.08■□□□□ 0.32
SLIT3-206ENST00000519560 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.32
SLIT3-206ENST00000519560 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
SLIT3-206ENST00000519560 CCAR2Q8N163 923 aaKnown RBP17.07■□□□□ 0.32
SLIT3-206ENST00000519560 PATL2C9JE40 543 aaKnown RBP17.07■□□□□ 0.32
SLIT3-206ENST00000519560 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
SLIT3-206ENST00000519560 CHMP3Q9Y3E7 222 aa17.07■□□□□ 0.32
SLIT3-206ENST00000519560 TPM2P07951 284 aa17.06■□□□□ 0.32
SLIT3-206ENST00000519560 VPS53Q5VIR6 699 aa17.06■□□□□ 0.32
SLIT3-206ENST00000519560 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
SLIT3-206ENST00000519560 FMN1Q68DA7 1419 aa17.05■□□□□ 0.32
SLIT3-206ENST00000519560 ZNF771Q7L3S4 317 aaPredicted RBP17.05■□□□□ 0.32
SLIT3-206ENST00000519560 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
SLIT3-206ENST00000519560 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
SLIT3-206ENST00000519560 GOLGA6L19H0YKK7 550 aa17.04■□□□□ 0.32
SLIT3-206ENST00000519560 SIN3AQ96ST3 1273 aa17.04■□□□□ 0.32
SLIT3-206ENST00000519560 TEX35Q5T0J7 233 aa17.04■□□□□ 0.32
SLIT3-206ENST00000519560 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
SLIT3-206ENST00000519560 SF3A1Q15459 793 aaKnown RBP17.03■□□□□ 0.32
SLIT3-206ENST00000519560 ATP6V1DQ9Y5K8 247 aa17.03■□□□□ 0.32
SLIT3-206ENST00000519560 EIF4G1Q04637 1599 aaKnown RBP17.03■□□□□ 0.32
SLIT3-206ENST00000519560 ROCK2O75116 1388 aaKnown RBP17.03■□□□□ 0.32
SLIT3-206ENST00000519560 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
SLIT3-206ENST00000519560 NOL8Q76FK4 1167 aaKnown RBP17.02■□□□□ 0.32
SLIT3-206ENST00000519560 H3BQV1 296 aa17.02■□□□□ 0.31
SLIT3-206ENST00000519560 IFFO2Q5TF58 517 aa17.02■□□□□ 0.31
SLIT3-206ENST00000519560 RALBP1Q15311 655 aa17.01■□□□□ 0.31
SLIT3-206ENST00000519560 MARCH6O60337 910 aa17■□□□□ 0.31
SLIT3-206ENST00000519560 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
SLIT3-206ENST00000519560 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms