RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 UBTFP17480 764 aaKnown RBP27.93■■■□□ 2.06
TNPO1-211ENST00000518279 PLPPR3Q6T4P5 718 aa27.93■■■□□ 2.06
TNPO1-211ENST00000518279 ATP1B4Q9UN42 357 aaPredicted RBP27.93■■■□□ 2.06
TNPO1-211ENST00000518279 ARHGAP35Q9NRY4 1499 aa27.92■■■□□ 2.06
TNPO1-211ENST00000518279 HSPA2P54652 639 aa27.9■■■□□ 2.06
TNPO1-211ENST00000518279 MLECQ14165 292 aa27.9■■■□□ 2.06
TNPO1-211ENST00000518279 FMN1Q68DA7 1419 aa27.9■■■□□ 2.06
TNPO1-211ENST00000518279 MYO5CQ9NQX4 1742 aa27.86■■■□□ 2.05
TNPO1-211ENST00000518279 KIF14Q15058 1648 aa27.85■■■□□ 2.05
TNPO1-211ENST00000518279 EFCAB2Q5VUJ9 269 aa27.84■■■□□ 2.05
TNPO1-211ENST00000518279 FER1L4A9Z1Z3 1794 aa27.83■■■□□ 2.05
TNPO1-211ENST00000518279 ATP10AO60312 1499 aa27.83■■■□□ 2.04
TNPO1-211ENST00000518279 CDK11AQ9UQ88 783 aaPredicted RBP27.81■■■□□ 2.04
TNPO1-211ENST00000518279 LRRIQ1Q96JM4 1722 aa27.79■■■□□ 2.04
TNPO1-211ENST00000518279 ARHGEF12Q9NZN5 1544 aa27.78■■■□□ 2.04
TNPO1-211ENST00000518279 TROQ12816 1431 aaPredicted RBP27.78■■■□□ 2.04
TNPO1-211ENST00000518279 C9orf84Q5VXU9 1444 aa27.78■■■□□ 2.04
TNPO1-211ENST00000518279 ARHGAP5Q13017 1502 aa27.74■■■□□ 2.03
TNPO1-211ENST00000518279 AFAP1Q8N556 730 aa27.74■■■□□ 2.03
TNPO1-211ENST00000518279 ZNF518AQ6AHZ1 1483 aa27.73■■■□□ 2.03
TNPO1-211ENST00000518279 KDM5CP41229 1560 aa27.72■■■□□ 2.03
TNPO1-211ENST00000518279 CLIP1P30622 1438 aa27.7■■■□□ 2.03
TNPO1-211ENST00000518279 CEBPAP49715 358 aaPredicted RBP27.7■■■□□ 2.02
TNPO1-211ENST00000518279 CDC42BPBQ9Y5S2 1711 aa27.68■■■□□ 2.02
TNPO1-211ENST00000518279 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
TNPO1-211ENST00000518279 PREX1Q8TCU6 1659 aa27.65■■■□□ 2.02
TNPO1-211ENST00000518279 MYT1LQ9UL68 1186 aa27.62■■■□□ 2.01
TNPO1-211ENST00000518279 ABCA6Q8N139 1617 aa27.61■■■□□ 2.01
TNPO1-211ENST00000518279 CERKQ8TCT0 537 aa27.61■■■□□ 2.01
TNPO1-211ENST00000518279 PREX2Q70Z35 1606 aa27.6■■■□□ 2.01
TNPO1-211ENST00000518279 CASKIN1Q8WXD9 1431 aa27.6■■■□□ 2.01
TNPO1-211ENST00000518279 TRAPPC8Q9Y2L5 1435 aa27.59■■■□□ 2.01
TNPO1-211ENST00000518279 MLH3Q9UHC1 1453 aa27.59■■■□□ 2.01
TNPO1-211ENST00000518279 REREQ9P2R6 1566 aa27.59■■■□□ 2.01
TNPO1-211ENST00000518279 ABCC1P33527 1531 aa27.58■■■□□ 2.01
TNPO1-211ENST00000518279 CCDC18Q5T9S5 1454 aa27.57■■■□□ 2
TNPO1-211ENST00000518279 ITSN2Q9NZM3 1697 aa27.55■■■□□ 2
TNPO1-211ENST00000518279 STRCQ7RTU9 1775 aa27.54■■■□□ 2
TNPO1-211ENST00000518279 CDC42BPAQ5VT25 1732 aa27.52■■■□□ 2
TNPO1-211ENST00000518279 UHRF1BP1Q6BDS2 1440 aa27.51■■□□□ 1.99
TNPO1-211ENST00000518279 SETD1BQ9UPS6 1966 aaKnown RBP27.51■■□□□ 1.99
TNPO1-211ENST00000518279 AGLP35573 1532 aa27.51■■□□□ 1.99
TNPO1-211ENST00000518279 C3P01024 1663 aa27.5■■□□□ 1.99
TNPO1-211ENST00000518279 KIDINS220Q9ULH0 1771 aa27.5■■□□□ 1.99
TNPO1-211ENST00000518279 FYCO1Q9BQS8 1478 aa27.46■■□□□ 1.99
TNPO1-211ENST00000518279 DMRT2Q9Y5R5 561 aa27.43■■□□□ 1.98
TNPO1-211ENST00000518279 SAMD9LQ8IVG5 1584 aa27.43■■□□□ 1.98
TNPO1-211ENST00000518279 ZNF777Q9ULD5 760 aaPredicted RBP27.42■■□□□ 1.98
TNPO1-211ENST00000518279 ESF1Q9H501 851 aaKnown RBP27.41■■□□□ 1.98
TNPO1-211ENST00000518279 GPATCH8Q9UKJ3 1502 aaKnown RBP27.4■■□□□ 1.98
TNPO1-211ENST00000518279 SYCP2Q9BX26 1530 aa27.39■■□□□ 1.98
TNPO1-211ENST00000518279 HNRNPMP52272 730 aaKnown RBP eCLIP27.37■■□□□ 1.979e-6■■■■□ 22.2
TNPO1-211ENST00000518279 CNTLNQ9NXG0 1405 aa27.35■■□□□ 1.97
TNPO1-211ENST00000518279 PTPRTO14522 1441 aa27.34■■□□□ 1.97
TNPO1-211ENST00000518279 SPAG9O60271 1321 aaKnown RBP27.34■■□□□ 1.97
TNPO1-211ENST00000518279 SUPT6HQ7KZ85 1726 aaKnown RBP27.31■■□□□ 1.96
TNPO1-211ENST00000518279 NCOA1Q15788 1441 aa27.29■■□□□ 1.96
TNPO1-211ENST00000518279 MROH2AA6NES4 1674 aa27.29■■□□□ 1.96
TNPO1-211ENST00000518279 ATP7AQ04656 1500 aa27.28■■□□□ 1.96
TNPO1-211ENST00000518279 KIAA1107Q9UPP5 1409 aa27.28■■□□□ 1.96
TNPO1-211ENST00000518279 CFDP1Q9UEE9 299 aaPredicted RBP27.28■■□□□ 1.96
TNPO1-211ENST00000518279 ZMYM3Q14202 1370 aa27.27■■□□□ 1.96
TNPO1-211ENST00000518279 INO80Q9ULG1 1556 aaPredicted RBP27.26■■□□□ 1.96
TNPO1-211ENST00000518279 CCNB3Q8WWL7 1395 aa27.26■■□□□ 1.95
TNPO1-211ENST00000518279 NPATQ14207 1427 aa27.25■■□□□ 1.95
TNPO1-211ENST00000518279 LTBP4Q8N2S1 1624 aa27.25■■□□□ 1.95
TNPO1-211ENST00000518279 PLXNC1O60486 1568 aa27.25■■□□□ 1.95
TNPO1-211ENST00000518279 PLEKHH2Q8IVE3 1493 aa27.24■■□□□ 1.95
TNPO1-211ENST00000518279 A2MP01023 1474 aa27.23■■□□□ 1.95
TNPO1-211ENST00000518279 CAMSAP1Q5T5Y3 1602 aa27.23■■□□□ 1.95
TNPO1-211ENST00000518279 CLTCQ00610 1675 aaKnown RBP27.22■■□□□ 1.95
TNPO1-211ENST00000518279 MTUS2Q5JR59 1369 aa27.22■■□□□ 1.95
TNPO1-211ENST00000518279 ZNF644Q9H582 1327 aaPredicted RBP27.19■■□□□ 1.94
TNPO1-211ENST00000518279 GGT6Q6P531 493 aa27.17■■□□□ 1.94
TNPO1-211ENST00000518279 TIAM1Q13009 1591 aa27.17■■□□□ 1.94
TNPO1-211ENST00000518279 NCKAP5LQ9HCH0 1330 aa27.16■■□□□ 1.94
TNPO1-211ENST00000518279 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
TNPO1-211ENST00000518279 MYO3AQ8NEV4 1616 aa27.14■■□□□ 1.94
TNPO1-211ENST00000518279 MBD5Q9P267 1494 aa27.13■■□□□ 1.93
TNPO1-211ENST00000518279 DISP3Q9P2K9 1392 aa27.13■■□□□ 1.93
TNPO1-211ENST00000518279 ZNF142P52746 1687 aaPredicted RBP27.12■■□□□ 1.93
TNPO1-211ENST00000518279 ADGBQ8N7X0 1667 aa27.12■■□□□ 1.93
TNPO1-211ENST00000518279 ILDR2Q71H61 639 aa27.11■■□□□ 1.93
TNPO1-211ENST00000518279 IQSEC2Q5JU85 1478 aa27.1■■□□□ 1.93
TNPO1-211ENST00000518279 EHBP1L1Q8N3D4 1523 aa27.1■■□□□ 1.93
TNPO1-211ENST00000518279 CEP170BQ9Y4F5 1589 aaPredicted RBP27.09■■□□□ 1.93
TNPO1-211ENST00000518279 ZNF335Q9H4Z2 1342 aaPredicted RBP27.08■■□□□ 1.93
TNPO1-211ENST00000518279 CEP162Q5TB80 1403 aa27.07■■□□□ 1.92
TNPO1-211ENST00000518279 PLA2R1Q13018 1463 aa27.06■■□□□ 1.92
TNPO1-211ENST00000518279 PPP6R1Q9UPN7 881 aa27.05■■□□□ 1.92
TNPO1-211ENST00000518279 RTEL1-TNFRSF6BF6WH68 1400 aa27.05■■□□□ 1.92
TNPO1-211ENST00000518279 TCOF1Q13428 1488 aaKnown RBP27.05■■□□□ 1.92
TNPO1-211ENST00000518279 PKD2Q13563 968 aa27.03■■□□□ 1.92
TNPO1-211ENST00000518279 DHX29Q7Z478 1369 aaKnown RBP27.02■■□□□ 1.92
TNPO1-211ENST00000518279 SPATA31D1Q6ZQQ2 1576 aa26.98■■□□□ 1.91
TNPO1-211ENST00000518279 A2ML1A8K2U0 1454 aa26.97■■□□□ 1.91
TNPO1-211ENST00000518279 DNMT1P26358 1616 aaKnown RBP26.97■■□□□ 1.91
TNPO1-211ENST00000518279 NCOA2Q15596 1464 aa26.96■■□□□ 1.91
TNPO1-211ENST00000518279 CCDC141Q6ZP82 1450 aa26.96■■□□□ 1.91
TNPO1-211ENST00000518279 FBXO31Q5XUX0 539 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms