RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 EFCAB3Q8N7B9 438 aa11.61□□□□□ -0.55
CPS1-210ENST00000518043 TTLL13PA6NNM8 815 aa11.6□□□□□ -0.55
CPS1-210ENST00000518043 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
CPS1-210ENST00000518043 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
CPS1-210ENST00000518043 MRC2Q9UBG0 1479 aa11.58□□□□□ -0.56
CPS1-210ENST00000518043 WDR62O43379 1518 aa11.58□□□□□ -0.56
CPS1-210ENST00000518043 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
CPS1-210ENST00000518043 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
CPS1-210ENST00000518043 FGD5Q6ZNL6 1462 aa11.57□□□□□ -0.56
CPS1-210ENST00000518043 SOX12O15370 315 aa11.55□□□□□ -0.56
CPS1-210ENST00000518043 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
CPS1-210ENST00000518043 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
CPS1-210ENST00000518043 ERCC6Q03468 1493 aa11.53□□□□□ -0.56
CPS1-210ENST00000518043 PHF8Q9UPP1 1060 aa11.53□□□□□ -0.56
CPS1-210ENST00000518043 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
CPS1-210ENST00000518043 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
CPS1-210ENST00000518043 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
CPS1-210ENST00000518043 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
CPS1-210ENST00000518043 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
CPS1-210ENST00000518043 NLRP6P59044 892 aa11.51□□□□□ -0.57
CPS1-210ENST00000518043 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
CPS1-210ENST00000518043 FBXO22Q8NEZ5 403 aa11.51□□□□□ -0.57
CPS1-210ENST00000518043 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
CPS1-210ENST00000518043 SOGA1O94964 1423 aa11.51□□□□□ -0.57
CPS1-210ENST00000518043 CUX2O14529 1486 aa11.51□□□□□ -0.57
CPS1-210ENST00000518043 RUSC2Q8N2Y8 1516 aa11.5□□□□□ -0.57
CPS1-210ENST00000518043 TARBP1Q13395 1621 aaKnown RBP11.5□□□□□ -0.57
CPS1-210ENST00000518043 RAD54L2Q9Y4B4 1467 aa11.49□□□□□ -0.57
CPS1-210ENST00000518043 ABCA10Q8WWZ4 1543 aa11.47□□□□□ -0.57
CPS1-210ENST00000518043 DCBLD2Q96PD2 775 aa11.47□□□□□ -0.57
CPS1-210ENST00000518043 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
CPS1-210ENST00000518043 MS4A4AQ96JQ5 239 aa11.44□□□□□ -0.58
CPS1-210ENST00000518043 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
CPS1-210ENST00000518043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.585e-8■■■■■ 35.8
CPS1-210ENST00000518043 PPP1R37O75864 691 aa11.42□□□□□ -0.58
CPS1-210ENST00000518043 EEA1Q15075 1411 aa11.42□□□□□ -0.58
CPS1-210ENST00000518043 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
CPS1-210ENST00000518043 IFT140Q96RY7 1462 aa11.4□□□□□ -0.58
CPS1-210ENST00000518043 PELP1Q8IZL8 1130 aaKnown RBP11.4□□□□□ -0.58
CPS1-210ENST00000518043 IER5LQ5T953 404 aa11.39□□□□□ -0.59
CPS1-210ENST00000518043 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
CPS1-210ENST00000518043 KIF27Q86VH2 1401 aa11.38□□□□□ -0.59
CPS1-210ENST00000518043 ZNF608Q9ULD9 1512 aaPredicted RBP11.38□□□□□ -0.59
CPS1-210ENST00000518043 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
CPS1-210ENST00000518043 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
CPS1-210ENST00000518043 KIF21BO75037 1637 aa11.36□□□□□ -0.59
CPS1-210ENST00000518043 FAM9AQ8IZU1 332 aaPredicted RBP11.36□□□□□ -0.59
CPS1-210ENST00000518043 EIF4G3O43432 1585 aaKnown RBP11.36□□□□□ -0.59
CPS1-210ENST00000518043 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
CPS1-210ENST00000518043 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
CPS1-210ENST00000518043 TDRD9Q8NDG6 1382 aaKnown RBP11.34□□□□□ -0.59
CPS1-210ENST00000518043 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
CPS1-210ENST00000518043 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
CPS1-210ENST00000518043 IGF1RP08069 1367 aa11.33□□□□□ -0.6
CPS1-210ENST00000518043 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
CPS1-210ENST00000518043 ERICH3Q5RHP9 1530 aa11.32□□□□□ -0.6
CPS1-210ENST00000518043 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
CPS1-210ENST00000518043 CADPS2Q86UW7 1296 aa11.32□□□□□ -0.6
CPS1-210ENST00000518043 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
CPS1-210ENST00000518043 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.6
CPS1-210ENST00000518043 PLCG2P16885 1265 aa11.31□□□□□ -0.6
CPS1-210ENST00000518043 SEC24BO95487 1268 aa11.3□□□□□ -0.6
CPS1-210ENST00000518043 CUL7Q14999 1698 aa11.3□□□□□ -0.6
CPS1-210ENST00000518043 ADAMTS12P58397 1594 aa11.29□□□□□ -0.6
CPS1-210ENST00000518043 C7P10643 843 aa11.29□□□□□ -0.6
CPS1-210ENST00000518043 RAPGEF2Q9Y4G8 1499 aa11.29□□□□□ -0.6
CPS1-210ENST00000518043 METRNQ9UJH8 293 aa11.28□□□□□ -0.6
CPS1-210ENST00000518043 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
CPS1-210ENST00000518043 GRIN2BQ13224 1484 aa11.27□□□□□ -0.6
CPS1-210ENST00000518043 LOC105371045A0A1W2PR82 267 aa11.27□□□□□ -0.61
CPS1-210ENST00000518043 GOLGA3Q08378 1498 aa11.26□□□□□ -0.61
CPS1-210ENST00000518043 POTEFA5A3E0 1075 aa11.25□□□□□ -0.61
CPS1-210ENST00000518043 CARMIL1Q5VZK9 1371 aa11.24□□□□□ -0.61
CPS1-210ENST00000518043 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
CPS1-210ENST00000518043 MICALL2Q8IY33 904 aa11.23□□□□□ -0.61
CPS1-210ENST00000518043 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
CPS1-210ENST00000518043 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
CPS1-210ENST00000518043 G3V3G9 751 aa11.21□□□□□ -0.61
CPS1-210ENST00000518043 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
CPS1-210ENST00000518043 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
CPS1-210ENST00000518043 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
CPS1-210ENST00000518043 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
CPS1-210ENST00000518043 TNIKQ9UKE5 1360 aa11.19□□□□□ -0.62
CPS1-210ENST00000518043 WDR70Q9NW82 654 aa11.18□□□□□ -0.62
CPS1-210ENST00000518043 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
CPS1-210ENST00000518043 PDE4AP27815 886 aa11.17□□□□□ -0.62
CPS1-210ENST00000518043 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
CPS1-210ENST00000518043 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
CPS1-210ENST00000518043 CHD1O14646 1710 aa11.16□□□□□ -0.62
CPS1-210ENST00000518043 GRIN2AQ12879 1464 aa11.16□□□□□ -0.62
CPS1-210ENST00000518043 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.62
CPS1-210ENST00000518043 CEP170Q5SW79 1584 aa11.13□□□□□ -0.63
CPS1-210ENST00000518043 CEP162Q5TB80 1403 aa11.13□□□□□ -0.63
CPS1-210ENST00000518043 MFSD10Q14728 455 aa11.12□□□□□ -0.63
CPS1-210ENST00000518043 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
CPS1-210ENST00000518043 NUP160Q12769 1436 aa11.11□□□□□ -0.63
CPS1-210ENST00000518043 DDX27Q96GQ7 796 aaKnown RBP11.11□□□□□ -0.63
CPS1-210ENST00000518043 TMC2Q8TDI7 906 aa11.09□□□□□ -0.63
CPS1-210ENST00000518043 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
CPS1-210ENST00000518043 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms