RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SIN3AQ96ST3 1273 aa38.6■■■■□ 3.77
COL13A1-210ENST00000517713 ROCK1Q13464 1354 aa38.6■■■■□ 3.77
COL13A1-210ENST00000517713 ABCC10Q5T3U5 1492 aa38.59■■■■□ 3.77
COL13A1-210ENST00000517713 NEUROD1Q13562 356 aa38.55■■■■□ 3.76
COL13A1-210ENST00000517713 CDC42BPAQ5VT25 1732 aa38.54■■■■□ 3.76
COL13A1-210ENST00000517713 KDM6BO15054 1643 aa38.52■■■■□ 3.76
COL13A1-210ENST00000517713 TIMELESSQ9UNS1 1208 aa38.52■■■■□ 3.76
COL13A1-210ENST00000517713 ABCC2Q92887 1545 aa38.51■■■■□ 3.75
COL13A1-210ENST00000517713 ZNF777Q9ULD5 760 aaPredicted RBP38.5■■■■□ 3.75
COL13A1-210ENST00000517713 TRIM52Q96A61 297 aa38.41■■■■□ 3.74
COL13A1-210ENST00000517713 ACIN1Q9UKV3 1341 aaKnown RBP38.41■■■■□ 3.74
COL13A1-210ENST00000517713 CROCC2H7BZ55 1655 aa38.4■■■■□ 3.74
COL13A1-210ENST00000517713 ADGBQ8N7X0 1667 aa38.39■■■■□ 3.74
COL13A1-210ENST00000517713 UHRF1BP1LA0JNW5 1464 aa38.34■■■■□ 3.73
COL13A1-210ENST00000517713 ADGRL2O95490 1459 aa38.33■■■■□ 3.73
COL13A1-210ENST00000517713 NCOA1Q15788 1441 aa38.32■■■■□ 3.73
COL13A1-210ENST00000517713 DENND4BO75064 1496 aaPredicted RBP38.3■■■■□ 3.72
COL13A1-210ENST00000517713 PREX2Q70Z35 1606 aa38.29■■■■□ 3.72
COL13A1-210ENST00000517713 MPHOSPH9Q99550 1183 aa38.28■■■■□ 3.72
COL13A1-210ENST00000517713 TONSLQ96HA7 1378 aa38.26■■■■□ 3.72
COL13A1-210ENST00000517713 CDC42BPBQ9Y5S2 1711 aa38.26■■■■□ 3.72
COL13A1-210ENST00000517713 PPP1R15AO75807 674 aaPredicted RBP38.26■■■■□ 3.71
COL13A1-210ENST00000517713 ZCCHC11Q5TAX3 1644 aaKnown RBP38.25■■■■□ 3.71
COL13A1-210ENST00000517713 ANKRD30AQ9BXX3 1397 aa38.25■■■■□ 3.71
COL13A1-210ENST00000517713 SHANK2Q9UPX8 1470 aa38.24■■■■□ 3.71
COL13A1-210ENST00000517713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.23■■■■□ 3.71
COL13A1-210ENST00000517713 KDM5BQ9UGL1 1544 aa38.22■■■■□ 3.71
COL13A1-210ENST00000517713 TTC37Q6PGP7 1564 aa38.21■■■■□ 3.71
COL13A1-210ENST00000517713 ARHGEF5Q12774 1597 aa38.2■■■■□ 3.71
COL13A1-210ENST00000517713 SAMD9LQ8IVG5 1584 aa38.19■■■■□ 3.7
COL13A1-210ENST00000517713 C9orf84Q5VXU9 1444 aa38.17■■■■□ 3.7
COL13A1-210ENST00000517713 MBD5Q9P267 1494 aa38.15■■■■□ 3.7
COL13A1-210ENST00000517713 HNRNPMP52272 730 aaKnown RBP eCLIP38.15■■■■□ 3.7
COL13A1-210ENST00000517713 TSPY4P0CV99 314 aa38.14■■■■□ 3.7
COL13A1-210ENST00000517713 TSPY10P0CW01 314 aa38.14■■■■□ 3.7
COL13A1-210ENST00000517713 MYO5CQ9NQX4 1742 aa38.11■■■■□ 3.69
COL13A1-210ENST00000517713 ARHGAP5Q13017 1502 aa38.11■■■■□ 3.69
COL13A1-210ENST00000517713 KCNH8Q96L42 1107 aa38.11■■■■□ 3.69
COL13A1-210ENST00000517713 RSPH4AQ5TD94 716 aa38.08■■■■□ 3.69
COL13A1-210ENST00000517713 CCDC141Q6ZP82 1450 aa38.08■■■■□ 3.69
COL13A1-210ENST00000517713 ANKRD50Q9ULJ7 1429 aa38.07■■■■□ 3.69
COL13A1-210ENST00000517713 MIER1Q8N108 512 aa38.06■■■■□ 3.68
COL13A1-210ENST00000517713 SLC4A1APQ9BWU0 796 aaKnown RBP38.06■■■■□ 3.68
COL13A1-210ENST00000517713 OSCARQ8IYS5 282 aa38.05■■■■□ 3.68
COL13A1-210ENST00000517713 FOXD1Q16676 465 aa38.04■■■■□ 3.68
COL13A1-210ENST00000517713 PZPP20742 1482 aa38.03■■■■□ 3.68
COL13A1-210ENST00000517713 ANKRD30BQ9BXX2 1392 aa38.01■■■■□ 3.68
COL13A1-210ENST00000517713 SYCP2Q9BX26 1530 aa38■■■■□ 3.67
COL13A1-210ENST00000517713 PLEKHH2Q8IVE3 1493 aa37.98■■■■□ 3.67
COL13A1-210ENST00000517713 PLCH2O75038 1416 aa37.98■■■■□ 3.67
COL13A1-210ENST00000517713 KIF15Q9NS87 1388 aa37.96■■■■□ 3.67
COL13A1-210ENST00000517713 KIAA1107Q9UPP5 1409 aa37.95■■■■□ 3.67
COL13A1-210ENST00000517713 MAST1Q9Y2H9 1570 aa37.92■■■■□ 3.66
COL13A1-210ENST00000517713 RPRD2Q5VT52 1461 aaKnown RBP37.9■■■■□ 3.66
COL13A1-210ENST00000517713 EFCAB2Q5VUJ9 269 aa37.87■■■■□ 3.65
COL13A1-210ENST00000517713 WDR7Q9Y4E6 1490 aa37.86■■■■□ 3.65
COL13A1-210ENST00000517713 KDM5DQ9BY66 1539 aa37.83■■■■□ 3.65
COL13A1-210ENST00000517713 NUP155O75694 1391 aa37.83■■■■□ 3.65
COL13A1-210ENST00000517713 ARHGEF12Q9NZN5 1544 aa37.82■■■■□ 3.64
COL13A1-210ENST00000517713 PKD2Q13563 968 aa37.8■■■■□ 3.64
COL13A1-210ENST00000517713 L3MBTL2Q969R5 705 aa37.8■■■■□ 3.64
COL13A1-210ENST00000517713 ARAP3Q8WWN8 1544 aa37.79■■■■□ 3.64
COL13A1-210ENST00000517713 ABCC1P33527 1531 aa37.77■■■■□ 3.64
COL13A1-210ENST00000517713 PLXNC1O60486 1568 aa37.76■■■■□ 3.64
COL13A1-210ENST00000517713 TEX14Q8IWB6 1497 aa37.73■■■■□ 3.63
COL13A1-210ENST00000517713 HIRIP3Q9BW71 556 aaPredicted RBP37.72■■■■□ 3.63
COL13A1-210ENST00000517713 ASXL2Q76L83 1435 aa37.7■■■■□ 3.63
COL13A1-210ENST00000517713 ABCA9Q8IUA7 1624 aa37.69■■■■□ 3.62
COL13A1-210ENST00000517713 CENPBP07199 599 aaPredicted RBP37.66■■■■□ 3.62
COL13A1-210ENST00000517713 TRAPPC8Q9Y2L5 1435 aa37.64■■■■□ 3.62
COL13A1-210ENST00000517713 DUOX2Q9NRD8 1548 aa37.63■■■■□ 3.61
COL13A1-210ENST00000517713 NPM1P06748 294 aaKnown RBP eCLIP37.63■■■■□ 3.61
COL13A1-210ENST00000517713 UNC13BO14795 1591 aa37.62■■■■□ 3.61
COL13A1-210ENST00000517713 DDX10Q13206 875 aaKnown RBP37.61■■■■□ 3.61
COL13A1-210ENST00000517713 FAM135AQ9P2D6 1515 aa37.61■■■■□ 3.61
COL13A1-210ENST00000517713 FANCAO15360 1455 aa37.58■■■■□ 3.61
COL13A1-210ENST00000517713 ERBINQ96RT1 1412 aa37.55■■■■□ 3.6
COL13A1-210ENST00000517713 YTHDC1Q96MU7 727 aaKnown RBP37.54■■■■□ 3.6
COL13A1-210ENST00000517713 NBPF8Q3BBV2 869 aa37.53■■■■□ 3.6
COL13A1-210ENST00000517713 RTEL1-TNFRSF6BF6WH68 1400 aa37.52■■■■□ 3.6
COL13A1-210ENST00000517713 SPAG9O60271 1321 aaKnown RBP37.52■■■■□ 3.6
COL13A1-210ENST00000517713 HSPA5P11021 654 aaKnown RBP37.5■■■■□ 3.59
COL13A1-210ENST00000517713 EIF4G2P78344 907 aaKnown RBP eCLIP37.49■■■■□ 3.59
COL13A1-210ENST00000517713 AFAP1Q8N556 730 aa37.49■■■■□ 3.59
COL13A1-210ENST00000517713 IQGAP3Q86VI3 1631 aa37.47■■■■□ 3.59
COL13A1-210ENST00000517713 ZFYVE16Q7Z3T8 1539 aa37.46■■■■□ 3.59
COL13A1-210ENST00000517713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.46■■■■□ 3.59
COL13A1-210ENST00000517713 MAGI2Q86UL8 1455 aa37.44■■■■□ 3.58
COL13A1-210ENST00000517713 ADGRL1O94910 1474 aa37.43■■■■□ 3.58
COL13A1-210ENST00000517713 SCAPERQ9BY12 1400 aa37.4■■■■□ 3.58
COL13A1-210ENST00000517713 INO80Q9ULG1 1556 aaPredicted RBP37.37■■■■□ 3.57
COL13A1-210ENST00000517713 ATP7AQ04656 1500 aa37.36■■■■□ 3.57
COL13A1-210ENST00000517713 UHRF1BP1Q6BDS2 1440 aa37.31■■■■□ 3.56
COL13A1-210ENST00000517713 CD109Q6YHK3 1445 aa37.31■■■■□ 3.56
COL13A1-210ENST00000517713 CCDC144AA2RUR9 1427 aa37.29■■■■□ 3.56
COL13A1-210ENST00000517713 PLA2R1Q13018 1463 aa37.28■■■■□ 3.56
COL13A1-210ENST00000517713 SCAF1Q9H7N4 1312 aaKnown RBP37.27■■■■□ 3.56
COL13A1-210ENST00000517713 CFAP74Q9C0B2 1584 aa37.27■■■■□ 3.56
COL13A1-210ENST00000517713 WASHC2AQ641Q2 1341 aa37.27■■■■□ 3.56
COL13A1-210ENST00000517713 SPATA31E1Q6ZUB1 1445 aa37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms