RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 ABCC5O15440 1437 aa23.88■■□□□ 1.41
CHMP7-203ENST00000517325 TRIM52Q96A61 297 aa23.86■■□□□ 1.41
CHMP7-203ENST00000517325 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
CHMP7-203ENST00000517325 KDM5BQ9UGL1 1544 aa23.84■■□□□ 1.41
CHMP7-203ENST00000517325 HIRIP3Q9BW71 556 aaPredicted RBP23.83■■□□□ 1.41
CHMP7-203ENST00000517325 KIF14Q15058 1648 aa23.83■■□□□ 1.41
CHMP7-203ENST00000517325 ADCY10Q96PN6 1610 aa23.81■■□□□ 1.4
CHMP7-203ENST00000517325 DDX10Q13206 875 aaKnown RBP23.81■■□□□ 1.4
CHMP7-203ENST00000517325 GPATCH8Q9UKJ3 1502 aaKnown RBP23.79■■□□□ 1.4
CHMP7-203ENST00000517325 ABCA8O94911 1581 aa23.79■■□□□ 1.4
CHMP7-203ENST00000517325 MPHOSPH9Q99550 1183 aa23.79■■□□□ 1.4
CHMP7-203ENST00000517325 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
CHMP7-203ENST00000517325 ITSN2Q9NZM3 1697 aa23.78■■□□□ 1.4
CHMP7-203ENST00000517325 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
CHMP7-203ENST00000517325 ATP10BO94823 1461 aa23.73■■□□□ 1.39
CHMP7-203ENST00000517325 FOXD1Q16676 465 aa23.72■■□□□ 1.39
CHMP7-203ENST00000517325 KCNH8Q96L42 1107 aa23.71■■□□□ 1.39
CHMP7-203ENST00000517325 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
CHMP7-203ENST00000517325 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
CHMP7-203ENST00000517325 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
CHMP7-203ENST00000517325 ABCC10Q5T3U5 1492 aa23.66■■□□□ 1.38
CHMP7-203ENST00000517325 CROCC2H7BZ55 1655 aa23.66■■□□□ 1.38
CHMP7-203ENST00000517325 ADGBQ8N7X0 1667 aa23.66■■□□□ 1.38
CHMP7-203ENST00000517325 CHD1O14646 1710 aa23.65■■□□□ 1.38
CHMP7-203ENST00000517325 CDC42BPAQ5VT25 1732 aa23.65■■□□□ 1.38
CHMP7-203ENST00000517325 ANKRD30BQ9BXX2 1392 aa23.65■■□□□ 1.38
CHMP7-203ENST00000517325 ADGRL2O95490 1459 aa23.64■■□□□ 1.37
CHMP7-203ENST00000517325 PTPRGP23470 1445 aa23.63■■□□□ 1.37
CHMP7-203ENST00000517325 SLC4A1APQ9BWU0 796 aaKnown RBP23.62■■□□□ 1.37
CHMP7-203ENST00000517325 L3MBTL2Q969R5 705 aa23.61■■□□□ 1.37
CHMP7-203ENST00000517325 RPRD2Q5VT52 1461 aaKnown RBP23.6■■□□□ 1.37
CHMP7-203ENST00000517325 PZPP20742 1482 aa23.6■■□□□ 1.37
CHMP7-203ENST00000517325 SUPT16HQ9Y5B9 1047 aaKnown RBP23.59■■□□□ 1.37
CHMP7-203ENST00000517325 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
CHMP7-203ENST00000517325 TEX14Q8IWB6 1497 aa23.55■■□□□ 1.36
CHMP7-203ENST00000517325 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
CHMP7-203ENST00000517325 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
CHMP7-203ENST00000517325 SHANK2Q9UPX8 1470 aa23.52■■□□□ 1.36
CHMP7-203ENST00000517325 ANP32CO43423 234 aa23.52■■□□□ 1.36
CHMP7-203ENST00000517325 C9orf84Q5VXU9 1444 aa23.51■■□□□ 1.35
CHMP7-203ENST00000517325 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
CHMP7-203ENST00000517325 CCER2I3L3R5 266 aa23.48■■□□□ 1.35
CHMP7-203ENST00000517325 EIF4G2P78344 907 aaKnown RBP eCLIP23.48■■□□□ 1.352e-8■■■■■ 35.8
CHMP7-203ENST00000517325 NBPF8Q3BBV2 869 aa23.47■■□□□ 1.35
CHMP7-203ENST00000517325 ERCC6L2Q5T890 1561 aa23.47■■□□□ 1.35
CHMP7-203ENST00000517325 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
CHMP7-203ENST00000517325 KIAA1107Q9UPP5 1409 aa23.46■■□□□ 1.35
CHMP7-203ENST00000517325 HNRNPMP52272 730 aaKnown RBP eCLIP23.45■■□□□ 1.34
CHMP7-203ENST00000517325 MBD5Q9P267 1494 aa23.44■■□□□ 1.34
CHMP7-203ENST00000517325 ARHGEF5Q12774 1597 aa23.44■■□□□ 1.34
CHMP7-203ENST00000517325 CDC42BPBQ9Y5S2 1711 aa23.44■■□□□ 1.34
CHMP7-203ENST00000517325 TSHZ2Q9NRE2 1034 aa23.44■■□□□ 1.34
CHMP7-203ENST00000517325 SAMD9LQ8IVG5 1584 aa23.43■■□□□ 1.34
CHMP7-203ENST00000517325 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
CHMP7-203ENST00000517325 PKD2Q13563 968 aa23.43■■□□□ 1.34
CHMP7-203ENST00000517325 TSPY4P0CV99 314 aa23.43■■□□□ 1.34
CHMP7-203ENST00000517325 TSPY10P0CW01 314 aa23.43■■□□□ 1.34
CHMP7-203ENST00000517325 KIF15Q9NS87 1388 aa23.39■■□□□ 1.34
CHMP7-203ENST00000517325 ABCC2Q92887 1545 aa23.39■■□□□ 1.34
CHMP7-203ENST00000517325 NUP155O75694 1391 aa23.38■■□□□ 1.33
CHMP7-203ENST00000517325 TTC37Q6PGP7 1564 aa23.38■■□□□ 1.33
CHMP7-203ENST00000517325 CCDC141Q6ZP82 1450 aa23.37■■□□□ 1.33
CHMP7-203ENST00000517325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.36■■□□□ 1.33
CHMP7-203ENST00000517325 KDM5DQ9BY66 1539 aa23.36■■□□□ 1.33
CHMP7-203ENST00000517325 C11orf95C9JLR9 678 aaPredicted RBP23.36■■□□□ 1.33
CHMP7-203ENST00000517325 SPATA31E1Q6ZUB1 1445 aa23.34■■□□□ 1.33
CHMP7-203ENST00000517325 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.32
CHMP7-203ENST00000517325 SYCP2Q9BX26 1530 aa23.32■■□□□ 1.32
CHMP7-203ENST00000517325 CCDC7Q96M83 1385 aa23.32■■□□□ 1.32
CHMP7-203ENST00000517325 ARHGAP5Q13017 1502 aa23.32■■□□□ 1.32
CHMP7-203ENST00000517325 CNTLNQ9NXG0 1405 aa23.31■■□□□ 1.32
CHMP7-203ENST00000517325 ANP32EQ9BTT0 268 aa23.3■■□□□ 1.32
CHMP7-203ENST00000517325 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
CHMP7-203ENST00000517325 MYO5CQ9NQX4 1742 aa23.26■■□□□ 1.31
CHMP7-203ENST00000517325 BCANQ96GW7 911 aa23.25■■□□□ 1.31
CHMP7-203ENST00000517325 MAST1Q9Y2H9 1570 aa23.24■■□□□ 1.31
CHMP7-203ENST00000517325 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
CHMP7-203ENST00000517325 ZCCHC11Q5TAX3 1644 aaKnown RBP23.24■■□□□ 1.31
CHMP7-203ENST00000517325 KIF7Q2M1P5 1343 aa23.23■■□□□ 1.31
CHMP7-203ENST00000517325 POLR1AO95602 1720 aaPredicted RBP23.22■■□□□ 1.31
CHMP7-203ENST00000517325 FAM135AQ9P2D6 1515 aa23.22■■□□□ 1.31
CHMP7-203ENST00000517325 UHRF1BP1LA0JNW5 1464 aa23.21■■□□□ 1.31
CHMP7-203ENST00000517325 UHRF1BP1Q6BDS2 1440 aa23.2■■□□□ 1.3
CHMP7-203ENST00000517325 USP47Q96K76 1375 aa23.19■■□□□ 1.3
CHMP7-203ENST00000517325 PLEKHH2Q8IVE3 1493 aa23.19■■□□□ 1.3
CHMP7-203ENST00000517325 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
CHMP7-203ENST00000517325 PLCH2O75038 1416 aa23.16■■□□□ 1.3
CHMP7-203ENST00000517325 PLXNC1O60486 1568 aa23.16■■□□□ 1.3
CHMP7-203ENST00000517325 UNC13BO14795 1591 aa23.16■■□□□ 1.3
CHMP7-203ENST00000517325 KDM5CP41229 1560 aa23.16■■□□□ 1.3
CHMP7-203ENST00000517325 RALGAPBQ86X10 1494 aa23.16■■□□□ 1.3
CHMP7-203ENST00000517325 BCORL1Q5H9F3 1711 aa23.15■■□□□ 1.3
CHMP7-203ENST00000517325 PRKRIP1Q9H875 184 aaPredicted RBP23.14■■□□□ 1.3
CHMP7-203ENST00000517325 BCL11AQ9H165 835 aa23.14■■□□□ 1.29
CHMP7-203ENST00000517325 CCDC184Q52MB2 194 aa23.12■■□□□ 1.29
CHMP7-203ENST00000517325 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
CHMP7-203ENST00000517325 EFCAB2Q5VUJ9 269 aa23.09■■□□□ 1.29
CHMP7-203ENST00000517325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
CHMP7-203ENST00000517325 ABCC1P33527 1531 aa23.09■■□□□ 1.29
CHMP7-203ENST00000517325 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms