RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 CDC42BPBQ9Y5S2 1711 aa8.03□□□□□ -1.12
SCARNA20.4-201ENST00000516969 DAPK1P53355 1430 aa8.03□□□□□ -1.12
SCARNA20.4-201ENST00000516969 GCC2Q8IWJ2 1684 aa8.02□□□□□ -1.13
SCARNA20.4-201ENST00000516969 CAMSAP2Q08AD1 1489 aa8.02□□□□□ -1.13
SCARNA20.4-201ENST00000516969 MAPKBP1O60336 1514 aa8.01□□□□□ -1.13
SCARNA20.4-201ENST00000516969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCARNA20.4-201ENST00000516969 PREX2Q70Z35 1606 aa8□□□□□ -1.13
SCARNA20.4-201ENST00000516969 CROCC2H7BZ55 1655 aa8□□□□□ -1.13
SCARNA20.4-201ENST00000516969 TTC37Q6PGP7 1564 aa7.99□□□□□ -1.13
SCARNA20.4-201ENST00000516969 RRP7BPQ9NSQ0 103 aa7.99□□□□□ -1.13
SCARNA20.4-201ENST00000516969 CHIC2Q9UKJ5 165 aa7.99□□□□□ -1.13
SCARNA20.4-201ENST00000516969 ADGRL2O95490 1459 aa7.99□□□□□ -1.13
SCARNA20.4-201ENST00000516969 ACIN1Q9UKV3 1341 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.4-201ENST00000516969 ADGBQ8N7X0 1667 aa7.98□□□□□ -1.13
SCARNA20.4-201ENST00000516969 MYO5CQ9NQX4 1742 aa7.98□□□□□ -1.13
SCARNA20.4-201ENST00000516969 ARHGEF5Q12774 1597 aa7.98□□□□□ -1.13
SCARNA20.4-201ENST00000516969 NCOA1Q15788 1441 aa7.98□□□□□ -1.13
SCARNA20.4-201ENST00000516969 MBD5Q9P267 1494 aa7.98□□□□□ -1.13
SCARNA20.4-201ENST00000516969 SAMD9LQ8IVG5 1584 aa7.97□□□□□ -1.13
SCARNA20.4-201ENST00000516969 KDM6BO15054 1643 aa7.97□□□□□ -1.13
SCARNA20.4-201ENST00000516969 RSPH4AQ5TD94 716 aa7.97□□□□□ -1.13
SCARNA20.4-201ENST00000516969 ZNF777Q9ULD5 760 aaPredicted RBP7.97□□□□□ -1.13
SCARNA20.4-201ENST00000516969 PLCH2O75038 1416 aa7.96□□□□□ -1.13
SCARNA20.4-201ENST00000516969 SHANK2Q9UPX8 1470 aa7.96□□□□□ -1.13
SCARNA20.4-201ENST00000516969 KCNH8Q96L42 1107 aa7.96□□□□□ -1.14
SCARNA20.4-201ENST00000516969 KIAA1107Q9UPP5 1409 aa7.95□□□□□ -1.14
SCARNA20.4-201ENST00000516969 WDR7Q9Y4E6 1490 aa7.95□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ARAP3Q8WWN8 1544 aa7.95□□□□□ -1.14
SCARNA20.4-201ENST00000516969 HNRNPMP52272 730 aaKnown RBP eCLIP7.94□□□□□ -1.14
SCARNA20.4-201ENST00000516969 TIMELESSQ9UNS1 1208 aa7.94□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ANKRD30AQ9BXX3 1397 aa7.94□□□□□ -1.14
SCARNA20.4-201ENST00000516969 DENND4BO75064 1496 aaPredicted RBP7.94□□□□□ -1.14
SCARNA20.4-201ENST00000516969 PLEKHH2Q8IVE3 1493 aa7.94□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ARHGAP5Q13017 1502 aa7.93□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ABCA9Q8IUA7 1624 aa7.93□□□□□ -1.14
SCARNA20.4-201ENST00000516969 TSPY4P0CV99 314 aa7.93□□□□□ -1.14
SCARNA20.4-201ENST00000516969 TSPY10P0CW01 314 aa7.93□□□□□ -1.14
SCARNA20.4-201ENST00000516969 C9orf84Q5VXU9 1444 aa7.93□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ASXL2Q76L83 1435 aa7.93□□□□□ -1.14
SCARNA20.4-201ENST00000516969 CCDC141Q6ZP82 1450 aa7.93□□□□□ -1.14
SCARNA20.4-201ENST00000516969 MAST1Q9Y2H9 1570 aa7.93□□□□□ -1.14
SCARNA20.4-201ENST00000516969 EFCAB2Q5VUJ9 269 aa7.92□□□□□ -1.14
SCARNA20.4-201ENST00000516969 SIN3AQ96ST3 1273 aa7.92□□□□□ -1.14
SCARNA20.4-201ENST00000516969 SYCP2Q9BX26 1530 aa7.92□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ARHGEF12Q9NZN5 1544 aa7.92□□□□□ -1.14
SCARNA20.4-201ENST00000516969 MPHOSPH9Q99550 1183 aa7.91□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ABCC1P33527 1531 aa7.9□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ANKRD50Q9ULJ7 1429 aa7.9□□□□□ -1.14
SCARNA20.4-201ENST00000516969 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.14
SCARNA20.4-201ENST00000516969 NPM1P06748 294 aaKnown RBP eCLIP7.9□□□□□ -1.14
SCARNA20.4-201ENST00000516969 TRIM52Q96A61 297 aa7.9□□□□□ -1.14
SCARNA20.4-201ENST00000516969 RIMBP3CA6NJZ7 1639 aa7.89□□□□□ -1.15
SCARNA20.4-201ENST00000516969 RIMBP3BA6NNM3 1639 aa7.89□□□□□ -1.15
SCARNA20.4-201ENST00000516969 RIMBP3Q9UFD9 1639 aa7.89□□□□□ -1.15
SCARNA20.4-201ENST00000516969 PLXNC1O60486 1568 aa7.88□□□□□ -1.15
SCARNA20.4-201ENST00000516969 PZPP20742 1482 aa7.88□□□□□ -1.15
SCARNA20.4-201ENST00000516969 ANKRD30BQ9BXX2 1392 aa7.88□□□□□ -1.15
SCARNA20.4-201ENST00000516969 KIF15Q9NS87 1388 aa7.88□□□□□ -1.15
SCARNA20.4-201ENST00000516969 NEUROD1Q13562 356 aa7.88□□□□□ -1.15
SCARNA20.4-201ENST00000516969 PPP1R15AO75807 674 aaPredicted RBP7.87□□□□□ -1.15
SCARNA20.4-201ENST00000516969 KDM5DQ9BY66 1539 aa7.87□□□□□ -1.15
SCARNA20.4-201ENST00000516969 FANCAO15360 1455 aa7.87□□□□□ -1.15
SCARNA20.4-201ENST00000516969 RTEL1-TNFRSF6BF6WH68 1400 aa7.86□□□□□ -1.15
SCARNA20.4-201ENST00000516969 TRAPPC8Q9Y2L5 1435 aa7.86□□□□□ -1.15
SCARNA20.4-201ENST00000516969 DUOX2Q9NRD8 1548 aa7.85□□□□□ -1.15
SCARNA20.4-201ENST00000516969 CYB5RLQ6IPT4 315 aa7.85□□□□□ -1.15
SCARNA20.4-201ENST00000516969 SLC4A1APQ9BWU0 796 aaKnown RBP7.85□□□□□ -1.15
SCARNA20.4-201ENST00000516969 FOXD1Q16676 465 aa7.84□□□□□ -1.15
SCARNA20.4-201ENST00000516969 AFAP1Q8N556 730 aa7.84□□□□□ -1.15
SCARNA20.4-201ENST00000516969 CD109Q6YHK3 1445 aa7.84□□□□□ -1.15
SCARNA20.4-201ENST00000516969 NUP155O75694 1391 aa7.84□□□□□ -1.16
SCARNA20.4-201ENST00000516969 RPRD2Q5VT52 1461 aaKnown RBP7.83□□□□□ -1.16
SCARNA20.4-201ENST00000516969 ERBINQ96RT1 1412 aa7.83□□□□□ -1.16
SCARNA20.4-201ENST00000516969 SCAPERQ9BY12 1400 aa7.83□□□□□ -1.16
SCARNA20.4-201ENST00000516969 UNC13BO14795 1591 aa7.83□□□□□ -1.16
SCARNA20.4-201ENST00000516969 GLI2P10070 1586 aa7.83□□□□□ -1.16
SCARNA20.4-201ENST00000516969 CFAP74Q9C0B2 1584 aa7.83□□□□□ -1.16
SCARNA20.4-201ENST00000516969 TONSLQ96HA7 1378 aa7.83□□□□□ -1.16
SCARNA20.4-201ENST00000516969 SPAG9O60271 1321 aaKnown RBP7.82□□□□□ -1.16
SCARNA20.4-201ENST00000516969 ADGRL1O94910 1474 aa7.82□□□□□ -1.16
SCARNA20.4-201ENST00000516969 PKD2Q13563 968 aa7.82□□□□□ -1.16
SCARNA20.4-201ENST00000516969 DIEXFQ68CQ4 756 aaKnown RBP7.82□□□□□ -1.16
SCARNA20.4-201ENST00000516969 INO80Q9ULG1 1556 aaPredicted RBP7.82□□□□□ -1.16
SCARNA20.4-201ENST00000516969 ZFYVE16Q7Z3T8 1539 aa7.82□□□□□ -1.16
SCARNA20.4-201ENST00000516969 MAP3K4Q9Y6R4 1608 aa7.81□□□□□ -1.16
SCARNA20.4-201ENST00000516969 MAGI2Q86UL8 1455 aa7.81□□□□□ -1.16
SCARNA20.4-201ENST00000516969 ATP7AQ04656 1500 aa7.81□□□□□ -1.16
SCARNA20.4-201ENST00000516969 FAM135AQ9P2D6 1515 aa7.81□□□□□ -1.16
SCARNA20.4-201ENST00000516969 KIDINS220Q9ULH0 1771 aa7.81□□□□□ -1.16
SCARNA20.4-201ENST00000516969 IQGAP3Q86VI3 1631 aa7.81□□□□□ -1.16
SCARNA20.4-201ENST00000516969 NEO1Q92859 1461 aa7.81□□□□□ -1.16
SCARNA20.4-201ENST00000516969 ZNF518AQ6AHZ1 1483 aa7.8□□□□□ -1.16
SCARNA20.4-201ENST00000516969 KDM5CP41229 1560 aa7.8□□□□□ -1.16
SCARNA20.4-201ENST00000516969 DEPDC5O75140 1603 aa7.79□□□□□ -1.16
SCARNA20.4-201ENST00000516969 L3MBTL2Q969R5 705 aa7.79□□□□□ -1.16
SCARNA20.4-201ENST00000516969 TEX14Q8IWB6 1497 aa7.79□□□□□ -1.16
SCARNA20.4-201ENST00000516969 DHX29Q7Z478 1369 aaKnown RBP7.78□□□□□ -1.16
SCARNA20.4-201ENST00000516969 MLH3Q9UHC1 1453 aa7.78□□□□□ -1.16
SCARNA20.4-201ENST00000516969 EIF2AK4Q9P2K8 1649 aaKnown RBP7.78□□□□□ -1.16
SCARNA20.4-201ENST00000516969 POGZQ7Z3K3 1410 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms