RNA–Protein interactions for RNA: ENST00000516960.1

RNU6-943P-201, Transcript of RNA, U6 small nuclear 943, pseudogene, humanhuman

BASIC

Gene RNU6-943P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-943P-201ENST00000516960 CABP2Q9NPB3 220 aa10.37□□□□□ -0.75
RNU6-943P-201ENST00000516960 DDRGK1Q96HY6 314 aa10.36□□□□□ -0.75
RNU6-943P-201ENST00000516960 REM2Q8IYK8 340 aaPredicted RBP10.34□□□□□ -0.75
RNU6-943P-201ENST00000516960 PLEKHG3A1L390 1219 aa10.33□□□□□ -0.76
RNU6-943P-201ENST00000516960 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
RNU6-943P-201ENST00000516960 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
RNU6-943P-201ENST00000516960 A6NJR5 290 aa10.31□□□□□ -0.76
RNU6-943P-201ENST00000516960 CCDC82Q8N4S0 544 aa10.31□□□□□ -0.76
RNU6-943P-201ENST00000516960 TRAK2O60296 914 aa10.29□□□□□ -0.76
RNU6-943P-201ENST00000516960 CCDC61Q9Y6R9 512 aa10.28□□□□□ -0.76
RNU6-943P-201ENST00000516960 MINK1Q8N4C8 1332 aaPredicted RBP10.28□□□□□ -0.76
RNU6-943P-201ENST00000516960 ONECUT3O60422 494 aaPredicted RBP10.26□□□□□ -0.77
RNU6-943P-201ENST00000516960 IFNL1Q8IU54 200 aa10.26□□□□□ -0.77
RNU6-943P-201ENST00000516960 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
RNU6-943P-201ENST00000516960 CLUAP1Q96AJ1 413 aa10.25□□□□□ -0.77
RNU6-943P-201ENST00000516960 MS4A4AQ96JQ5 239 aa10.25□□□□□ -0.77
RNU6-943P-201ENST00000516960 GPR37O15354 613 aa10.24□□□□□ -0.77
RNU6-943P-201ENST00000516960 GOPCQ9HD26 462 aa10.24□□□□□ -0.77
RNU6-943P-201ENST00000516960 AMHR2Q16671 573 aa10.23□□□□□ -0.77
RNU6-943P-201ENST00000516960 MAP2K5Q13163 448 aa10.22□□□□□ -0.77
RNU6-943P-201ENST00000516960 PARP9Q8IXQ6 854 aa10.22□□□□□ -0.77
RNU6-943P-201ENST00000516960 CCDC102AQ96A19 550 aa10.22□□□□□ -0.77
RNU6-943P-201ENST00000516960 DPYSL4O14531 572 aa10.21□□□□□ -0.77
RNU6-943P-201ENST00000516960 IRF6O14896 467 aa10.21□□□□□ -0.77
RNU6-943P-201ENST00000516960 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
RNU6-943P-201ENST00000516960 CHADLQ6NUI6 762 aa10.2□□□□□ -0.78
RNU6-943P-201ENST00000516960 KCTD17Q8N5Z5 321 aa10.2□□□□□ -0.78
RNU6-943P-201ENST00000516960 TRAIPQ9BWF2 469 aa10.2□□□□□ -0.78
RNU6-943P-201ENST00000516960 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
RNU6-943P-201ENST00000516960 PITPNM1O00562 1244 aa10.19□□□□□ -0.78
RNU6-943P-201ENST00000516960 PDIA6Q15084 440 aa10.19□□□□□ -0.78
RNU6-943P-201ENST00000516960 PCMTD1Q96MG8 357 aaPredicted RBP10.19□□□□□ -0.78
RNU6-943P-201ENST00000516960 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
RNU6-943P-201ENST00000516960 MAP3K13O43283 966 aa10.16□□□□□ -0.78
RNU6-943P-201ENST00000516960 GPHNQ9NQX3 736 aaPredicted RBP10.15□□□□□ -0.78
RNU6-943P-201ENST00000516960 EMILIN3Q9NT22 766 aa10.15□□□□□ -0.78
RNU6-943P-201ENST00000516960 ZNF777Q9ULD5 760 aaPredicted RBP10.15□□□□□ -0.78
RNU6-943P-201ENST00000516960 TTLL12Q14166 644 aaPredicted RBP10.13□□□□□ -0.79
RNU6-943P-201ENST00000516960 MCM6Q14566 821 aa10.13□□□□□ -0.79
RNU6-943P-201ENST00000516960 CCDC97Q96F63 343 aaPredicted RBP10.13□□□□□ -0.79
RNU6-943P-201ENST00000516960 KIF12Q96FN5 646 aa10.13□□□□□ -0.79
RNU6-943P-201ENST00000516960 SERPINA10Q9UK55 444 aa10.13□□□□□ -0.79
RNU6-943P-201ENST00000516960 GNPATO15228 680 aa10.12□□□□□ -0.79
RNU6-943P-201ENST00000516960 RAD21O60216 631 aa10.12□□□□□ -0.79
RNU6-943P-201ENST00000516960 PROSER2Q86WR7 435 aaPredicted RBP10.12□□□□□ -0.79
RNU6-943P-201ENST00000516960 AEBP1Q8IUX7 1158 aa10.12□□□□□ -0.79
RNU6-943P-201ENST00000516960 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
RNU6-943P-201ENST00000516960 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
RNU6-943P-201ENST00000516960 GRXCR2A6NFK2 248 aa10.09□□□□□ -0.79
RNU6-943P-201ENST00000516960 HIC1Q14526 733 aa10.08□□□□□ -0.8
RNU6-943P-201ENST00000516960 FCHSD2O94868 740 aa10.06□□□□□ -0.8
RNU6-943P-201ENST00000516960 MS4A1P11836 297 aa10.06□□□□□ -0.8
RNU6-943P-201ENST00000516960 GIGYF2Q6Y7W6 1299 aaKnown RBP10.06□□□□□ -0.8
RNU6-943P-201ENST00000516960 FNBP4Q8N3X1 1017 aaPredicted RBP10.06□□□□□ -0.8
RNU6-943P-201ENST00000516960 FECHP22830 423 aa10.05□□□□□ -0.8
RNU6-943P-201ENST00000516960 DSG2Q14126 1118 aa10.05□□□□□ -0.8
RNU6-943P-201ENST00000516960 SH3D19Q5HYK7 790 aa10.05□□□□□ -0.8
RNU6-943P-201ENST00000516960 TMCO4Q5TGY1 634 aa10.04□□□□□ -0.8
RNU6-943P-201ENST00000516960 RGS22Q8NE09 1264 aa10.03□□□□□ -0.8
RNU6-943P-201ENST00000516960 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
RNU6-943P-201ENST00000516960 POM121Q96HA1 1249 aa10.02□□□□□ -0.81
RNU6-943P-201ENST00000516960 OSBPP22059 807 aa10□□□□□ -0.81
RNU6-943P-201ENST00000516960 GZF1Q9H116 711 aaPredicted RBP10□□□□□ -0.81
RNU6-943P-201ENST00000516960 MTMR7Q9Y216 660 aa10□□□□□ -0.81
RNU6-943P-201ENST00000516960 SKIV2LQ15477 1246 aaKnown RBP9.99□□□□□ -0.81
RNU6-943P-201ENST00000516960 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
RNU6-943P-201ENST00000516960 TMEM106CQ9BVX2 250 aa9.99□□□□□ -0.81
RNU6-943P-201ENST00000516960 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
RNU6-943P-201ENST00000516960 FOXK1P85037 733 aa9.98□□□□□ -0.81
RNU6-943P-201ENST00000516960 TMC2Q8TDI7 906 aa9.98□□□□□ -0.81
RNU6-943P-201ENST00000516960 OXER1Q8TDS5 423 aa9.98□□□□□ -0.81
RNU6-943P-201ENST00000516960 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
RNU6-943P-201ENST00000516960 MFAP1P55081 439 aaKnown RBP9.97□□□□□ -0.81
RNU6-943P-201ENST00000516960 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
RNU6-943P-201ENST00000516960 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
RNU6-943P-201ENST00000516960 PRKAR2AP13861 404 aaKnown RBP9.96□□□□□ -0.82
RNU6-943P-201ENST00000516960 PLPP6Q8IY26 295 aa9.94□□□□□ -0.82
RNU6-943P-201ENST00000516960 SPDYE5A6NIY4 337 aa9.93□□□□□ -0.82
RNU6-943P-201ENST00000516960 CLCN1P35523 988 aa9.93□□□□□ -0.82
RNU6-943P-201ENST00000516960 IRF5Q13568 498 aa9.93□□□□□ -0.82
RNU6-943P-201ENST00000516960 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
RNU6-943P-201ENST00000516960 COG6Q9Y2V7 657 aa9.93□□□□□ -0.82
RNU6-943P-201ENST00000516960 ZNF330Q9Y3S2 320 aaPredicted RBP9.93□□□□□ -0.82
RNU6-943P-201ENST00000516960 LOC105371045A0A1W2PR82 267 aa9.92□□□□□ -0.82
RNU6-943P-201ENST00000516960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.92□□□□□ -0.82
RNU6-943P-201ENST00000516960 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
RNU6-943P-201ENST00000516960 PTGER2P43116 358 aa9.91□□□□□ -0.82
RNU6-943P-201ENST00000516960 RBM25P49756 843 aaKnown RBP9.91□□□□□ -0.82
RNU6-943P-201ENST00000516960 PTGDRQ13258 359 aa9.91□□□□□ -0.82
RNU6-943P-201ENST00000516960 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
RNU6-943P-201ENST00000516960 FOXD4L4Q8WXT5 416 aaPredicted RBP9.91□□□□□ -0.82
RNU6-943P-201ENST00000516960 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
RNU6-943P-201ENST00000516960 PDE4CQ08493 712 aa9.9□□□□□ -0.82
RNU6-943P-201ENST00000516960 ILDR1Q86SU0 546 aaPredicted RBP9.9□□□□□ -0.82
RNU6-943P-201ENST00000516960 DDX12PQ92771 950 aa9.9□□□□□ -0.82
RNU6-943P-201ENST00000516960 ACIN1Q9UKV3 1341 aaKnown RBP9.89□□□□□ -0.83
RNU6-943P-201ENST00000516960 SSTR3P32745 418 aaPredicted RBP9.89□□□□□ -0.83
RNU6-943P-201ENST00000516960 FBXW7Q969H0 707 aa9.89□□□□□ -0.83
RNU6-943P-201ENST00000516960 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
RNU6-943P-201ENST00000516960 POLR3EQ9NVU0 708 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms