RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 CDAN1Q8IWY9 1227 aa7.96□□□□□ -1.14
SCARNA16.2-201ENST00000516520 MARVELD3Q96A59 401 aa7.96□□□□□ -1.14
SCARNA16.2-201ENST00000516520 ZSWIM6Q9HCJ5 1215 aa7.96□□□□□ -1.14
SCARNA16.2-201ENST00000516520 PLSCR2Q9NRY7 297 aa7.96□□□□□ -1.14
SCARNA16.2-201ENST00000516520 HOXB1P14653 301 aaPredicted RBP7.94□□□□□ -1.14
SCARNA16.2-201ENST00000516520 PPP1R37O75864 691 aa7.92□□□□□ -1.14
SCARNA16.2-201ENST00000516520 TMC2Q8TDI7 906 aa7.92□□□□□ -1.14
SCARNA16.2-201ENST00000516520 C2orf72A6NCS6 295 aa7.91□□□□□ -1.14
SCARNA16.2-201ENST00000516520 KIF3CO14782 793 aa7.91□□□□□ -1.14
SCARNA16.2-201ENST00000516520 DCAF8L2P0C7V8 631 aa7.91□□□□□ -1.14
SCARNA16.2-201ENST00000516520 FAM205CA6NFA0 338 aa7.89□□□□□ -1.15
SCARNA16.2-201ENST00000516520 NKX1-1Q15270 411 aaPredicted RBP7.89□□□□□ -1.15
SCARNA16.2-201ENST00000516520 HS3ST6Q96QI5 342 aa7.89□□□□□ -1.15
SCARNA16.2-201ENST00000516520 ERBB3P21860 1342 aa7.87□□□□□ -1.15
SCARNA16.2-201ENST00000516520 AMER1Q5JTC6 1135 aaPredicted RBP7.86□□□□□ -1.15
SCARNA16.2-201ENST00000516520 GPR153Q6NV75 609 aa7.86□□□□□ -1.15
SCARNA16.2-201ENST00000516520 SLC34A2O95436 690 aa7.84□□□□□ -1.15
SCARNA16.2-201ENST00000516520 GPHNQ9NQX3 736 aaPredicted RBP7.83□□□□□ -1.16
SCARNA16.2-201ENST00000516520 POTEB3A0JP26 581 aa7.82□□□□□ -1.16
SCARNA16.2-201ENST00000516520 FOXK1P85037 733 aa7.82□□□□□ -1.16
SCARNA16.2-201ENST00000516520 ARSIQ5FYB1 569 aa7.82□□□□□ -1.16
SCARNA16.2-201ENST00000516520 POTEBQ6S5H4 581 aa7.82□□□□□ -1.16
SCARNA16.2-201ENST00000516520 VARS2Q5ST30 1063 aaKnown RBP7.81□□□□□ -1.16
SCARNA16.2-201ENST00000516520 GTPBP6O43824 516 aaPredicted RBP7.8□□□□□ -1.16
SCARNA16.2-201ENST00000516520 PCDHGA4Q9Y5G9 962 aa7.79□□□□□ -1.16
SCARNA16.2-201ENST00000516520 ZNF316A6NFI3 1004 aaPredicted RBP7.78□□□□□ -1.16
SCARNA16.2-201ENST00000516520 PLPP6Q8IY26 295 aa7.78□□□□□ -1.16
SCARNA16.2-201ENST00000516520 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
SCARNA16.2-201ENST00000516520 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
SCARNA16.2-201ENST00000516520 ZNF687Q8N1G0 1237 aa7.77□□□□□ -1.17
SCARNA16.2-201ENST00000516520 NUDT7P0C024 238 aa7.76□□□□□ -1.17
SCARNA16.2-201ENST00000516520 DSG2Q14126 1118 aa7.76□□□□□ -1.17
SCARNA16.2-201ENST00000516520 SPNS2Q8IVW8 549 aa7.76□□□□□ -1.17
SCARNA16.2-201ENST00000516520 PTCD2Q8WV60 388 aaKnown RBP7.76□□□□□ -1.17
SCARNA16.2-201ENST00000516520 KHSRPQ92945 711 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCARNA16.2-201ENST00000516520 CRISPLD2Q9H0B8 497 aa7.76□□□□□ -1.17
SCARNA16.2-201ENST00000516520 PDE4AP27815 886 aa7.75□□□□□ -1.17
SCARNA16.2-201ENST00000516520 TBC1D12O60347 775 aa7.74□□□□□ -1.17
SCARNA16.2-201ENST00000516520 BBXQ8WY36 941 aaPredicted RBP7.74□□□□□ -1.17
SCARNA16.2-201ENST00000516520 RTN4Q9NQC3 1192 aaKnown RBP7.74□□□□□ -1.17
SCARNA16.2-201ENST00000516520 PSDA5PKW4 1024 aaPredicted RBP7.73□□□□□ -1.17
SCARNA16.2-201ENST00000516520 MMRN1Q13201 1228 aa7.72□□□□□ -1.17
SCARNA16.2-201ENST00000516520 PPP1R15BQ5SWA1 713 aa7.72□□□□□ -1.17
SCARNA16.2-201ENST00000516520 LHX6Q9UPM6 363 aa7.71□□□□□ -1.18
SCARNA16.2-201ENST00000516520 NCKAP5LQ9HCH0 1330 aa7.71□□□□□ -1.18
SCARNA16.2-201ENST00000516520 PBX2P40425 430 aa7.7□□□□□ -1.18
SCARNA16.2-201ENST00000516520 DDX27Q96GQ7 796 aaKnown RBP7.69□□□□□ -1.18
SCARNA16.2-201ENST00000516520 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.69□□□□□ -1.18
SCARNA16.2-201ENST00000516520 KDM4FA0A1W2PPD8 638 aa7.68□□□□□ -1.18
SCARNA16.2-201ENST00000516520 OXER1Q8TDS5 423 aa7.68□□□□□ -1.18
SCARNA16.2-201ENST00000516520 LARP6Q9BRS8 491 aaKnown RBP7.68□□□□□ -1.18
SCARNA16.2-201ENST00000516520 PTGER2P43116 358 aa7.67□□□□□ -1.18
SCARNA16.2-201ENST00000516520 MFSD10Q14728 455 aa7.67□□□□□ -1.18
SCARNA16.2-201ENST00000516520 UPF1Q92900 1129 aaKnown RBP eCLIP7.66□□□□□ -1.18
SCARNA16.2-201ENST00000516520 PPP4R3BQ5MIZ7 849 aa7.65□□□□□ -1.18
SCARNA16.2-201ENST00000516520 SPRYD3Q8NCJ5 442 aa7.65□□□□□ -1.18
SCARNA16.2-201ENST00000516520 LSM11P83369 360 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCARNA16.2-201ENST00000516520 ANKRD13DQ6ZTN6 518 aa7.62□□□□□ -1.19
SCARNA16.2-201ENST00000516520 CADPS2Q86UW7 1296 aa7.62□□□□□ -1.19
SCARNA16.2-201ENST00000516520 ARHGAP33O14559 1287 aa7.61□□□□□ -1.19
SCARNA16.2-201ENST00000516520 KCNH8Q96L42 1107 aa7.61□□□□□ -1.19
SCARNA16.2-201ENST00000516520 MYT1LQ9UL68 1186 aa7.61□□□□□ -1.19
SCARNA16.2-201ENST00000516520 RNF166Q96A37 237 aaPredicted RBP7.6□□□□□ -1.19
SCARNA16.2-201ENST00000516520 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
SCARNA16.2-201ENST00000516520 POTEEQ6S8J3 1075 aa7.59□□□□□ -1.19
SCARNA16.2-201ENST00000516520 AXIN2Q9Y2T1 843 aa7.59□□□□□ -1.19
SCARNA16.2-201ENST00000516520 EVI5O60447 810 aa7.58□□□□□ -1.2
SCARNA16.2-201ENST00000516520 ZNF454Q8N9F8 522 aa7.58□□□□□ -1.2
SCARNA16.2-201ENST00000516520 PAXIP1Q6ZW49 1069 aaPredicted RBP7.57□□□□□ -1.2
SCARNA16.2-201ENST00000516520 JPH4Q96JJ6 628 aa7.57□□□□□ -1.2
SCARNA16.2-201ENST00000516520 CFAP44Q96MT7 982 aa7.57□□□□□ -1.2
SCARNA16.2-201ENST00000516520 ANO8Q9HCE9 1232 aaPredicted RBP7.57□□□□□ -1.2
SCARNA16.2-201ENST00000516520 TK2O00142 265 aa7.56□□□□□ -1.2
SCARNA16.2-201ENST00000516520 CAMK2BQ13554 666 aa7.56□□□□□ -1.2
SCARNA16.2-201ENST00000516520 EMILIN3Q9NT22 766 aa7.56□□□□□ -1.2
SCARNA16.2-201ENST00000516520 FOSBP53539 338 aa7.55□□□□□ -1.2
SCARNA16.2-201ENST00000516520 ADGRD1Q6QNK2 874 aa7.55□□□□□ -1.2
SCARNA16.2-201ENST00000516520 KCNK17Q96T54 332 aa7.54□□□□□ -1.2
SCARNA16.2-201ENST00000516520 BCL2L12Q9HB09 334 aa7.54□□□□□ -1.2
SCARNA16.2-201ENST00000516520 PSEN2P49810 448 aa7.53□□□□□ -1.2
SCARNA16.2-201ENST00000516520 PTPREP23469 700 aa7.52□□□□□ -1.21
SCARNA16.2-201ENST00000516520 DMRTA1Q5VZB9 504 aa7.52□□□□□ -1.21
SCARNA16.2-201ENST00000516520 ZDHHC16Q969W1 377 aa7.52□□□□□ -1.21
SCARNA16.2-201ENST00000516520 WDR70Q9NW82 654 aa7.5□□□□□ -1.21
SCARNA16.2-201ENST00000516520 DPYSL4O14531 572 aa7.49□□□□□ -1.21
SCARNA16.2-201ENST00000516520 FBXW7Q969H0 707 aa7.49□□□□□ -1.21
SCARNA16.2-201ENST00000516520 STAC3Q96MF2 364 aa7.49□□□□□ -1.21
SCARNA16.2-201ENST00000516520 SLC4A5Q9BY07 1137 aa7.49□□□□□ -1.21
SCARNA16.2-201ENST00000516520 HRO43593 1189 aa7.48□□□□□ -1.21
SCARNA16.2-201ENST00000516520 PHF14O94880 888 aa7.48□□□□□ -1.21
SCARNA16.2-201ENST00000516520 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
SCARNA16.2-201ENST00000516520 E2F4Q16254 413 aa7.47□□□□□ -1.21
SCARNA16.2-201ENST00000516520 ADAM33Q9BZ11 813 aa7.47□□□□□ -1.21
SCARNA16.2-201ENST00000516520 VPS9D1Q9Y2B5 631 aa7.47□□□□□ -1.21
SCARNA16.2-201ENST00000516520 PCDHGA10Q9Y5H3 936 aa7.47□□□□□ -1.21
SCARNA16.2-201ENST00000516520 EPAS1Q99814 870 aa7.46□□□□□ -1.22
SCARNA16.2-201ENST00000516520 SPDYE16A6NNV3 312 aaPredicted RBP7.45□□□□□ -1.22
SCARNA16.2-201ENST00000516520 PDIA6Q15084 440 aa7.45□□□□□ -1.22
SCARNA16.2-201ENST00000516520 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
SCARNA16.2-201ENST00000516520 ZBED2Q9BTP6 218 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms