RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 MICALL2Q8IY33 904 aa5.73□□□□□ -1.49
SNORA40.13-201ENST00000516379 A0A0G2JS52 829 aa5.72□□□□□ -1.49
SNORA40.13-201ENST00000516379 HRO43593 1189 aa5.72□□□□□ -1.49
SNORA40.13-201ENST00000516379 Q6ZNB5 142 aa5.72□□□□□ -1.49
SNORA40.13-201ENST00000516379 LCE2BO14633 110 aa5.7□□□□□ -1.5
SNORA40.13-201ENST00000516379 KCTD12Q96CX2 325 aaKnown RBP5.69□□□□□ -1.5
SNORA40.13-201ENST00000516379 GSE1Q14687 1217 aa5.68□□□□□ -1.5
SNORA40.13-201ENST00000516379 TK2O00142 265 aa5.67□□□□□ -1.5
SNORA40.13-201ENST00000516379 LHX6Q9UPM6 363 aa5.67□□□□□ -1.5
SNORA40.13-201ENST00000516379 ARHGAP33O14559 1287 aa5.66□□□□□ -1.5
SNORA40.13-201ENST00000516379 NUDT7P0C024 238 aa5.66□□□□□ -1.5
SNORA40.13-201ENST00000516379 DMRTA1Q5VZB9 504 aa5.63□□□□□ -1.51
SNORA40.13-201ENST00000516379 EFCAB3Q8N7B9 438 aa5.63□□□□□ -1.51
SNORA40.13-201ENST00000516379 PTPN5P54829 565 aa5.61□□□□□ -1.51
SNORA40.13-201ENST00000516379 MS4A4AQ96JQ5 239 aa5.6□□□□□ -1.51
SNORA40.13-201ENST00000516379 PSEN2P49810 448 aa5.59□□□□□ -1.51
SNORA40.13-201ENST00000516379 TRAF7Q6Q0C0 670 aa5.59□□□□□ -1.51
SNORA40.13-201ENST00000516379 EHMT2Q96KQ7 1210 aa5.57□□□□□ -1.52
SNORA40.13-201ENST00000516379 PCDHGA4Q9Y5G9 962 aa5.57□□□□□ -1.52
SNORA40.13-201ENST00000516379 SLC34A2O95436 690 aa5.56□□□□□ -1.52
SNORA40.13-201ENST00000516379 KIF3CO14782 793 aa5.55□□□□□ -1.52
SNORA40.13-201ENST00000516379 LAPTM4AQ15012 233 aa5.55□□□□□ -1.52
SNORA40.13-201ENST00000516379 PSDA5PKW4 1024 aaPredicted RBP5.54□□□□□ -1.52
SNORA40.13-201ENST00000516379 THSD4Q6ZMP0 1018 aa5.54□□□□□ -1.52
SNORA40.13-201ENST00000516379 KDM4FA0A1W2PPD8 638 aa5.53□□□□□ -1.52
SNORA40.13-201ENST00000516379 ZNF775Q96BV0 537 aaPredicted RBP5.53□□□□□ -1.52
SNORA40.13-201ENST00000516379 STAC3Q96MF2 364 aa5.53□□□□□ -1.52
SNORA40.13-201ENST00000516379 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
SNORA40.13-201ENST00000516379 SOX12O15370 315 aa5.51□□□□□ -1.53
SNORA40.13-201ENST00000516379 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
SNORA40.13-201ENST00000516379 VPS9D1Q9Y2B5 631 aa5.51□□□□□ -1.53
SNORA40.13-201ENST00000516379 C2orf72A6NCS6 295 aa5.5□□□□□ -1.53
SNORA40.13-201ENST00000516379 GFRA3O60609 400 aa5.49□□□□□ -1.53
SNORA40.13-201ENST00000516379 ITGBL1O95965 494 aaPredicted RBP5.49□□□□□ -1.53
SNORA40.13-201ENST00000516379 ZNF787Q6DD87 383 aa5.49□□□□□ -1.53
SNORA40.13-201ENST00000516379 PHF8Q9UPP1 1060 aa5.49□□□□□ -1.53
SNORA40.13-201ENST00000516379 BHMG1C9JSJ3 638 aaPredicted RBP5.48□□□□□ -1.53
SNORA40.13-201ENST00000516379 KLHL34Q8N239 644 aa5.48□□□□□ -1.53
SNORA40.13-201ENST00000516379 WNT2BQ93097 391 aa5.44□□□□□ -1.54
SNORA40.13-201ENST00000516379 KCNK17Q96T54 332 aa5.44□□□□□ -1.54
SNORA40.13-201ENST00000516379 SLC4A5Q9BY07 1137 aa5.44□□□□□ -1.54
SNORA40.13-201ENST00000516379 PPP4R3BQ5MIZ7 849 aa5.43□□□□□ -1.54
SNORA40.13-201ENST00000516379 NRG2O14511 850 aaPredicted RBP5.42□□□□□ -1.54
SNORA40.13-201ENST00000516379 FBXO22Q8NEZ5 403 aa5.41□□□□□ -1.54
SNORA40.13-201ENST00000516379 PTCD2Q8WV60 388 aaKnown RBP5.4□□□□□ -1.54
SNORA40.13-201ENST00000516379 FBXO3Q9UK99 471 aa5.39□□□□□ -1.55
SNORA40.13-201ENST00000516379 CIZ1Q9ULV3 898 aaPredicted RBP5.39□□□□□ -1.55
SNORA40.13-201ENST00000516379 GOLGA8CPA6NN73 597 aa5.38□□□□□ -1.55
SNORA40.13-201ENST00000516379 VASPP50552 380 aaPredicted RBP5.38□□□□□ -1.55
SNORA40.13-201ENST00000516379 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
SNORA40.13-201ENST00000516379 KCNH8Q96L42 1107 aa5.38□□□□□ -1.55
SNORA40.13-201ENST00000516379 NLRP6P59044 892 aa5.37□□□□□ -1.55
SNORA40.13-201ENST00000516379 MRPL50Q8N5N7 158 aaKnown RBP5.37□□□□□ -1.55
SNORA40.13-201ENST00000516379 KCNC4Q03721 635 aa5.35□□□□□ -1.55
SNORA40.13-201ENST00000516379 ZBED2Q9BTP6 218 aa5.35□□□□□ -1.55
SNORA40.13-201ENST00000516379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.34□□□□□ -1.55
SNORA40.13-201ENST00000516379 ZFP91Q96JP5 570 aaPredicted RBP5.34□□□□□ -1.55
SNORA40.13-201ENST00000516379 BCL2L12Q9HB09 334 aa5.34□□□□□ -1.55
SNORA40.13-201ENST00000516379 TMC2Q8TDI7 906 aa5.33□□□□□ -1.56
SNORA40.13-201ENST00000516379 FKBP8Q14318 412 aa5.32□□□□□ -1.56
SNORA40.13-201ENST00000516379 SPOCK2Q92563 424 aa5.32□□□□□ -1.56
SNORA40.13-201ENST00000516379 TREML4Q6UXN2 200 aa5.31□□□□□ -1.56
SNORA40.13-201ENST00000516379 PRKD2Q9BZL6 878 aa5.31□□□□□ -1.56
SNORA40.13-201ENST00000516379 NYAP1Q6ZVC0 841 aa5.3□□□□□ -1.56
SNORA40.13-201ENST00000516379 RNF25Q96BH1 459 aaPredicted RBP5.3□□□□□ -1.56
SNORA40.13-201ENST00000516379 MFRPQ9BY79 579 aa5.3□□□□□ -1.56
SNORA40.13-201ENST00000516379 NBPF3Q9H094 633 aa5.3□□□□□ -1.56
SNORA40.13-201ENST00000516379 POTECB2RU33 542 aa5.29□□□□□ -1.56
SNORA40.13-201ENST00000516379 BCAMP50895 628 aa5.29□□□□□ -1.56
SNORA40.13-201ENST00000516379 TRIM41Q8WV44 630 aa5.29□□□□□ -1.56
SNORA40.13-201ENST00000516379 RIOK3O14730 519 aaKnown RBP5.28□□□□□ -1.56
SNORA40.13-201ENST00000516379 V9GY48 417 aaPredicted RBP5.28□□□□□ -1.56
SNORA40.13-201ENST00000516379 SOWAHBA6NEL2 793 aa5.27□□□□□ -1.57
SNORA40.13-201ENST00000516379 PTPREP23469 700 aa5.27□□□□□ -1.57
SNORA40.13-201ENST00000516379 IFNLR1Q8IU57 520 aaPredicted RBP5.27□□□□□ -1.57
SNORA40.13-201ENST00000516379 ZNF454Q8N9F8 522 aa5.27□□□□□ -1.57
SNORA40.13-201ENST00000516379 ANKK1Q8NFD2 765 aa5.27□□□□□ -1.57
SNORA40.13-201ENST00000516379 WBP1LQ9NX94 342 aa5.27□□□□□ -1.57
SNORA40.13-201ENST00000516379 STK17AQ9UEE5 414 aa5.27□□□□□ -1.57
SNORA40.13-201ENST00000516379 PDZRN3Q9UPQ7 1066 aa5.27□□□□□ -1.57
SNORA40.13-201ENST00000516379 VGFO15240 615 aaPredicted RBP5.26□□□□□ -1.57
SNORA40.13-201ENST00000516379 TBC1D12O60347 775 aa5.24□□□□□ -1.57
SNORA40.13-201ENST00000516379 FOXK1P85037 733 aa5.24□□□□□ -1.57
SNORA40.13-201ENST00000516379 FOSBP53539 338 aa5.23□□□□□ -1.57
SNORA40.13-201ENST00000516379 PLPP6Q8IY26 295 aa5.23□□□□□ -1.57
SNORA40.13-201ENST00000516379 RABGEF1Q9UJ41 708 aa5.22□□□□□ -1.57
SNORA40.13-201ENST00000516379 MYT1Q01538 1121 aa5.21□□□□□ -1.58
SNORA40.13-201ENST00000516379 PPP1R18Q6NYC8 613 aa5.2□□□□□ -1.58
SNORA40.13-201ENST00000516379 LAPTM4BQ86VI4 370 aa5.2□□□□□ -1.58
SNORA40.13-201ENST00000516379 BCL11BQ9C0K0 894 aaPredicted RBP5.2□□□□□ -1.58
SNORA40.13-201ENST00000516379 ZFRQ96KR1 1074 aaKnown RBP5.19□□□□□ -1.58
SNORA40.13-201ENST00000516379 ADAM33Q9BZ11 813 aa5.19□□□□□ -1.58
SNORA40.13-201ENST00000516379 WIPF1O43516 503 aa5.18□□□□□ -1.58
SNORA40.13-201ENST00000516379 DSG2Q14126 1118 aa5.18□□□□□ -1.58
SNORA40.13-201ENST00000516379 PROX2Q3B8N5 592 aa5.18□□□□□ -1.58
SNORA40.13-201ENST00000516379 OXER1Q8TDS5 423 aa5.18□□□□□ -1.58
SNORA40.13-201ENST00000516379 TJAP1Q5JTD0 557 aa5.17□□□□□ -1.58
SNORA40.13-201ENST00000516379 TRIM67Q6ZTA4 783 aa5.17□□□□□ -1.58
SNORA40.13-201ENST00000516379 PPP1R37O75864 691 aa5.16□□□□□ -1.58
SNORA40.13-201ENST00000516379 SUZ12Q15022 739 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms