RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 WFDC1Q9HC57 220 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 IGSF5Q9NSI5 407 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 SRP68Q9UHB9 627 aaKnown RBP-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 BIRC6Q9NR09 4857 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 CHD6Q8TD26 2715 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 TENM3Q9P273 2699 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 USP9YO00507 2555 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 FAT1Q14517 4588 aa-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 FRAS1Q86XX4 4008 aa-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 RBM27Q9P2N5 1060 aaKnown RBP-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 MBD2Q9UBB5 411 aa-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 DSPP15924 2871 aaKnown RBP-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 ANKRD11Q6UB99 2663 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 PKD1L2Q7Z442 2459 aa-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 COL6A5A8TX70 2615 aa-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 USP9XQ93008 2570 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 EPG5Q9HCE0 2579 aa-0.07□□□□□ -2.42
SCARNA17-201ENST00000516183 MGAM2Q2M2H8 2515 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 ZANQ9Y493 2812 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 IGF2RP11717 2491 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 FBLL1A6NHQ2 334 aaKnown RBP-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 DLL1O00548 723 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 PRB4P10163 310 aaPredicted RBP-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 LCE1AQ5T7P2 110 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 LCE5AQ5TCM9 118 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 KRTAP1-5Q9BYS1 174 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 AVENQ9NQS1 362 aaPredicted RBP-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 STARD9Q9P2P6 4700 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 MEGF8Q7Z7M0 2845 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 COL12A1Q99715 3063 aa-0.08□□□□□ -2.42
SCARNA17-201ENST00000516183 NBEAL1Q6ZS30 2694 aa-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 TENM2Q9NT68 2774 aa-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 IGSF10Q6WRI0 2623 aa-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 MYO18BQ8IUG5 2567 aa-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 ITGB7P26010 798 aa-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 POU4F1Q01851 419 aa-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 BMPERQ8N8U9 685 aa-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 MAP1BP46821 2468 aaKnown RBP-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 TENM1Q9UKZ4 2725 aa-0.09□□□□□ -2.42
SCARNA17-201ENST00000516183 LRP2P98164 4655 aa-0.1□□□□□ -2.42
SCARNA17-201ENST00000516183 ERBB3P21860 1342 aa-0.1□□□□□ -2.42
SCARNA17-201ENST00000516183 CNTNAP4Q9C0A0 1308 aa-0.1□□□□□ -2.42
SCARNA17-201ENST00000516183 FLNCQ14315 2725 aa-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 CACNA1EQ15878 2313 aa-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 RPS2P15880 293 aaKnown RBP-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 KRTAP10-4P60372 401 aaPredicted RBP-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 KRTAP20-2Q3LI61 65 aa-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 ILDR1Q86SU0 546 aaPredicted RBP-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 CCER1Q8TC90 406 aaPredicted RBP-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 FUBP1Q96AE4 644 aaKnown RBP-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 OTOGQ6ZRI0 2925 aa-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 GPR179Q6PRD1 2367 aa-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 MYO7AQ13402 2215 aa-0.1□□□□□ -2.43
SCARNA17-201ENST00000516183 DMBT1Q9UGM3 2413 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 TNXBP22105 4242 aa-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 UBR5O95071 2799 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 ZNF292O60281 2723 aa-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 PDZD2O15018 2839 aa-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 KRTAP10-12P60413 245 aa-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 NAA40Q86UY6 237 aa-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 ALYREFQ86V81 257 aaKnown RBP-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 TRPM4Q8TD43 1214 aa-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 COL26A1Q96A83 441 aa-0.11□□□□□ -2.43
SCARNA17-201ENST00000516183 BAHCC1Q9P281 2608 aa-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 CACNA1HO95180 2353 aa-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 HNRNPA3P51991 378 aaKnown RBP-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 LCE3BQ5TA77 95 aa-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 KRT35Q92764 455 aa-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 LAMA2P24043 3122 aaKnown RBP-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 ATRXP46100 2492 aa-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 SETXQ7Z333 2677 aaKnown RBP-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 SRRM2Q9UQ35 2752 aaKnown RBP-0.12□□□□□ -2.43
SCARNA17-201ENST00000516183 FAM208BQ5VWN6 2430 aa-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 TLN1Q9Y490 2541 aaKnown RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 LAMA3Q16787 3333 aa-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 PRRC2AP48634 2157 aaKnown RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 RBMXP38159 391 aaKnown RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 MT4P47944 62 aa-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 NTN5Q8WTR8 489 aaPredicted RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 EMID1Q96A84 441 aaPredicted RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 HNRNPABQ99729 332 aaKnown RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 SLC4A5Q9BY07 1137 aa-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 KRTAP2-2Q9BYT5 123 aa-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 ZNF282Q9UDV7 671 aaPredicted RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 RGS17Q9UGC6 210 aaPredicted RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 LRP1BQ9NZR2 4599 aa-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 LRP1Q07954 4544 aaKnown RBP-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 TGP01266 2768 aa-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 ARID1AO14497 2285 aa-0.13□□□□□ -2.43
SCARNA17-201ENST00000516183 LRRK2Q5S007 2527 aa-0.14□□□□□ -2.43
SCARNA17-201ENST00000516183 BRWD1Q9NSI6 2320 aa-0.14□□□□□ -2.43
SCARNA17-201ENST00000516183 CHD9Q3L8U1 2897 aa-0.14□□□□□ -2.43
SCARNA17-201ENST00000516183 AKAP13Q12802 2813 aa-0.14□□□□□ -2.43
SCARNA17-201ENST00000516183 NIPBLQ6KC79 2804 aaeCLIP-0.14□□□□□ -2.432e-24■■□□□ 13.7
SCARNA17-201ENST00000516183 CCDC194A0A1B0GVG4 234 aa-0.14□□□□□ -2.43
SCARNA17-201ENST00000516183 SERINC4A6NH21 518 aa-0.14□□□□□ -2.43
SCARNA17-201ENST00000516183 KRTAP10-7P60409 375 aaPredicted RBP-0.14□□□□□ -2.43
SCARNA17-201ENST00000516183 COL10A1Q03692 680 aa-0.14□□□□□ -2.43
SCARNA17-201ENST00000516183 PRB3Q04118 309 aaPredicted RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms