RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 DCAF8L2P0C7V8 631 aa9.02□□□□□ -0.97
RNU4-49P-201ENST00000516080 EMP3P54852 163 aa9.02□□□□□ -0.97
RNU4-49P-201ENST00000516080 PPP1R37O75864 691 aa9.01□□□□□ -0.97
RNU4-49P-201ENST00000516080 CDAN1Q8IWY9 1227 aa9.01□□□□□ -0.97
RNU4-49P-201ENST00000516080 ZSWIM6Q9HCJ5 1215 aa9□□□□□ -0.97
RNU4-49P-201ENST00000516080 HOXB1P14653 301 aaPredicted RBP8.99□□□□□ -0.97
RNU4-49P-201ENST00000516080 NKX1-1Q15270 411 aaPredicted RBP8.99□□□□□ -0.97
RNU4-49P-201ENST00000516080 TMC2Q8TDI7 906 aa8.99□□□□□ -0.97
RNU4-49P-201ENST00000516080 PLSCR2Q9NRY7 297 aa8.99□□□□□ -0.97
RNU4-49P-201ENST00000516080 C2orf72A6NCS6 295 aa8.98□□□□□ -0.97
RNU4-49P-201ENST00000516080 KIF3CO14782 793 aa8.98□□□□□ -0.97
RNU4-49P-201ENST00000516080 AMER1Q5JTC6 1135 aaPredicted RBP8.96□□□□□ -0.98
RNU4-49P-201ENST00000516080 FAM205CA6NFA0 338 aa8.94□□□□□ -0.98
RNU4-49P-201ENST00000516080 HS3ST6Q96QI5 342 aa8.93□□□□□ -0.98
RNU4-49P-201ENST00000516080 GPR153Q6NV75 609 aa8.92□□□□□ -0.98
RNU4-49P-201ENST00000516080 ERBB3P21860 1342 aa8.91□□□□□ -0.98
RNU4-49P-201ENST00000516080 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.98
RNU4-49P-201ENST00000516080 SLC34A2O95436 690 aa8.9□□□□□ -0.98
RNU4-49P-201ENST00000516080 ARSIQ5FYB1 569 aa8.89□□□□□ -0.99
RNU4-49P-201ENST00000516080 GPHNQ9NQX3 736 aaPredicted RBP8.89□□□□□ -0.99
RNU4-49P-201ENST00000516080 POTEB3A0JP26 581 aa8.88□□□□□ -0.99
RNU4-49P-201ENST00000516080 POTEBQ6S5H4 581 aa8.88□□□□□ -0.99
RNU4-49P-201ENST00000516080 FOXK1P85037 733 aa8.87□□□□□ -0.99
RNU4-49P-201ENST00000516080 RTN4Q9NQC3 1192 aaKnown RBP8.86□□□□□ -0.99
RNU4-49P-201ENST00000516080 VARS2Q5ST30 1063 aaKnown RBP8.85□□□□□ -0.99
RNU4-49P-201ENST00000516080 PLPP6Q8IY26 295 aa8.84□□□□□ -0.99
RNU4-49P-201ENST00000516080 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
RNU4-49P-201ENST00000516080 DSG2Q14126 1118 aa8.83□□□□□ -1
RNU4-49P-201ENST00000516080 BBXQ8WY36 941 aaPredicted RBP8.83□□□□□ -1
RNU4-49P-201ENST00000516080 ZNF316A6NFI3 1004 aaPredicted RBP8.82□□□□□ -1
RNU4-49P-201ENST00000516080 KHSRPQ92945 711 aaKnown RBP eCLIP8.82□□□□□ -1
RNU4-49P-201ENST00000516080 CRISPLD2Q9H0B8 497 aa8.82□□□□□ -1
RNU4-49P-201ENST00000516080 PDE4AP27815 886 aa8.81□□□□□ -1
RNU4-49P-201ENST00000516080 PTCD2Q8WV60 388 aaKnown RBP8.81□□□□□ -1
RNU4-49P-201ENST00000516080 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
RNU4-49P-201ENST00000516080 KRTAP3-2Q9BYR7 98 aa8.81□□□□□ -1
RNU4-49P-201ENST00000516080 NUDT7P0C024 238 aa8.8□□□□□ -1
RNU4-49P-201ENST00000516080 ZNF687Q8N1G0 1237 aa8.8□□□□□ -1
RNU4-49P-201ENST00000516080 TBC1D12O60347 775 aa8.79□□□□□ -1
RNU4-49P-201ENST00000516080 SPNS2Q8IVW8 549 aa8.79□□□□□ -1
RNU4-49P-201ENST00000516080 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1.01
RNU4-49P-201ENST00000516080 NCKAP5LQ9HCH0 1330 aa8.77□□□□□ -1.01
RNU4-49P-201ENST00000516080 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
RNU4-49P-201ENST00000516080 LHX6Q9UPM6 363 aa8.76□□□□□ -1.01
RNU4-49P-201ENST00000516080 PSDA5PKW4 1024 aaPredicted RBP8.75□□□□□ -1.01
RNU4-49P-201ENST00000516080 LARP6Q9BRS8 491 aaKnown RBP8.75□□□□□ -1.01
RNU4-49P-201ENST00000516080 KDM4FA0A1W2PPD8 638 aa8.73□□□□□ -1.01
RNU4-49P-201ENST00000516080 MMRN1Q13201 1228 aa8.73□□□□□ -1.01
RNU4-49P-201ENST00000516080 OXER1Q8TDS5 423 aa8.73□□□□□ -1.01
RNU4-49P-201ENST00000516080 DDX27Q96GQ7 796 aaKnown RBP8.73□□□□□ -1.01
RNU4-49P-201ENST00000516080 SPRYD3Q8NCJ5 442 aa8.72□□□□□ -1.01
RNU4-49P-201ENST00000516080 PBX2P40425 430 aa8.71□□□□□ -1.02
RNU4-49P-201ENST00000516080 MFSD10Q14728 455 aa8.71□□□□□ -1.02
RNU4-49P-201ENST00000516080 UPF1Q92900 1129 aaKnown RBP eCLIP8.7□□□□□ -1.02
RNU4-49P-201ENST00000516080 CADPS2Q86UW7 1296 aa8.69□□□□□ -1.02
RNU4-49P-201ENST00000516080 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
RNU4-49P-201ENST00000516080 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
RNU4-49P-201ENST00000516080 PTGER2P43116 358 aa8.65□□□□□ -1.02
RNU4-49P-201ENST00000516080 ANKRD13DQ6ZTN6 518 aa8.65□□□□□ -1.02
RNU4-49P-201ENST00000516080 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
RNU4-49P-201ENST00000516080 PAXIP1Q6ZW49 1069 aaPredicted RBP8.64□□□□□ -1.03
RNU4-49P-201ENST00000516080 MAP3K9P80192 1104 aa8.63□□□□□ -1.03
RNU4-49P-201ENST00000516080 CFAP44Q96MT7 982 aa8.62□□□□□ -1.03
RNU4-49P-201ENST00000516080 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
RNU4-49P-201ENST00000516080 AXIN2Q9Y2T1 843 aa8.62□□□□□ -1.03
RNU4-49P-201ENST00000516080 EVI5O60447 810 aa8.61□□□□□ -1.03
RNU4-49P-201ENST00000516080 POTEEQ6S8J3 1075 aa8.61□□□□□ -1.03
RNU4-49P-201ENST00000516080 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
RNU4-49P-201ENST00000516080 MYT1LQ9UL68 1186 aa8.61□□□□□ -1.03
RNU4-49P-201ENST00000516080 ZNF454Q8N9F8 522 aa8.6□□□□□ -1.03
RNU4-49P-201ENST00000516080 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
RNU4-49P-201ENST00000516080 CAMK2BQ13554 666 aa8.59□□□□□ -1.03
RNU4-49P-201ENST00000516080 FOSBP53539 338 aa8.58□□□□□ -1.04
RNU4-49P-201ENST00000516080 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
RNU4-49P-201ENST00000516080 JPH4Q96JJ6 628 aa8.57□□□□□ -1.04
RNU4-49P-201ENST00000516080 TK2O00142 265 aa8.56□□□□□ -1.04
RNU4-49P-201ENST00000516080 BCL2L12Q9HB09 334 aa8.56□□□□□ -1.04
RNU4-49P-201ENST00000516080 PSEN2P49810 448 aa8.55□□□□□ -1.04
RNU4-49P-201ENST00000516080 ADGRD1Q6QNK2 874 aa8.55□□□□□ -1.04
RNU4-49P-201ENST00000516080 KCNK17Q96T54 332 aa8.55□□□□□ -1.04
RNU4-49P-201ENST00000516080 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
RNU4-49P-201ENST00000516080 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
RNU4-49P-201ENST00000516080 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
RNU4-49P-201ENST00000516080 DPYSL4O14531 572 aa8.52□□□□□ -1.05
RNU4-49P-201ENST00000516080 PTPREP23469 700 aa8.52□□□□□ -1.05
RNU4-49P-201ENST00000516080 E2F4Q16254 413 aa8.5□□□□□ -1.05
RNU4-49P-201ENST00000516080 FBXW7Q969H0 707 aa8.5□□□□□ -1.05
RNU4-49P-201ENST00000516080 PHF14O94880 888 aa8.49□□□□□ -1.05
RNU4-49P-201ENST00000516080 STAC3Q96MF2 364 aa8.49□□□□□ -1.05
RNU4-49P-201ENST00000516080 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
RNU4-49P-201ENST00000516080 ADAM33Q9BZ11 813 aa8.49□□□□□ -1.05
RNU4-49P-201ENST00000516080 PCDHGA10Q9Y5H3 936 aa8.49□□□□□ -1.05
RNU4-49P-201ENST00000516080 HRO43593 1189 aa8.48□□□□□ -1.05
RNU4-49P-201ENST00000516080 TYW1BQ6NUM6 668 aa8.48□□□□□ -1.05
RNU4-49P-201ENST00000516080 VPS9D1Q9Y2B5 631 aa8.48□□□□□ -1.05
RNU4-49P-201ENST00000516080 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
RNU4-49P-201ENST00000516080 EPAS1Q99814 870 aa8.47□□□□□ -1.05
RNU4-49P-201ENST00000516080 ARIH1Q9Y4X5 557 aaPredicted RBP8.46□□□□□ -1.06
RNU4-49P-201ENST00000516080 PDIA6Q15084 440 aa8.45□□□□□ -1.06
RNU4-49P-201ENST00000516080 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms