RNA–Protein interactions for RNA: ENST00000515593.1

HOXC10-205, Transcript of homeobox C10, humanhuman

TSL 4

Gene HOXC10, Length 526 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-205ENST00000515593 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
HOXC10-205ENST00000515593 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
HOXC10-205ENST00000515593 CFAP74Q9C0B2 1584 aa13.41□□□□□ -0.26
HOXC10-205ENST00000515593 SCAPERQ9BY12 1400 aa13.41□□□□□ -0.26
HOXC10-205ENST00000515593 STRCQ7RTU9 1775 aa13.41□□□□□ -0.26
HOXC10-205ENST00000515593 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
HOXC10-205ENST00000515593 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
HOXC10-205ENST00000515593 TTC37Q6PGP7 1564 aa13.4□□□□□ -0.26
HOXC10-205ENST00000515593 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
HOXC10-205ENST00000515593 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
HOXC10-205ENST00000515593 ATP10AO60312 1499 aa13.37□□□□□ -0.27
HOXC10-205ENST00000515593 MAGI2Q86UL8 1455 aa13.37□□□□□ -0.27
HOXC10-205ENST00000515593 SETD1BQ9UPS6 1966 aaKnown RBP13.36□□□□□ -0.27
HOXC10-205ENST00000515593 ARHGEF12Q9NZN5 1544 aa13.35□□□□□ -0.27
HOXC10-205ENST00000515593 PLCH2O75038 1416 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 C9orf84Q5VXU9 1444 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 UHRF1BP1Q6BDS2 1440 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 EFCAB2Q5VUJ9 269 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
HOXC10-205ENST00000515593 AFAP1Q8N556 730 aa13.33□□□□□ -0.28
HOXC10-205ENST00000515593 ESF1Q9H501 851 aaKnown RBP13.31□□□□□ -0.28
HOXC10-205ENST00000515593 PTPRTO14522 1441 aa13.29□□□□□ -0.28
HOXC10-205ENST00000515593 C3P01024 1663 aa13.28□□□□□ -0.28
HOXC10-205ENST00000515593 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
HOXC10-205ENST00000515593 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
HOXC10-205ENST00000515593 UBAP1LF5GYI3 381 aa13.26□□□□□ -0.29
HOXC10-205ENST00000515593 ARHGAP5Q13017 1502 aa13.24□□□□□ -0.29
HOXC10-205ENST00000515593 NCKAP5LQ9HCH0 1330 aa13.24□□□□□ -0.29
HOXC10-205ENST00000515593 KIF14Q15058 1648 aa13.24□□□□□ -0.29
HOXC10-205ENST00000515593 CDK11AQ9UQ88 783 aaPredicted RBP13.23□□□□□ -0.29
HOXC10-205ENST00000515593 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
HOXC10-205ENST00000515593 TRAPPC8Q9Y2L5 1435 aa13.22□□□□□ -0.29
HOXC10-205ENST00000515593 ZNF335Q9H4Z2 1342 aaPredicted RBP13.22□□□□□ -0.29
HOXC10-205ENST00000515593 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
HOXC10-205ENST00000515593 ABCA6Q8N139 1617 aa13.21□□□□□ -0.3
HOXC10-205ENST00000515593 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
HOXC10-205ENST00000515593 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
HOXC10-205ENST00000515593 NCOA1Q15788 1441 aa13.2□□□□□ -0.3
HOXC10-205ENST00000515593 CAMSAP1Q5T5Y3 1602 aa13.2□□□□□ -0.3
HOXC10-205ENST00000515593 KDM5CP41229 1560 aa13.19□□□□□ -0.3
HOXC10-205ENST00000515593 CDC42BPBQ9Y5S2 1711 aa13.18□□□□□ -0.3
HOXC10-205ENST00000515593 IQSEC2Q5JU85 1478 aa13.17□□□□□ -0.3
HOXC10-205ENST00000515593 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
HOXC10-205ENST00000515593 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
HOXC10-205ENST00000515593 MLH3Q9UHC1 1453 aa13.16□□□□□ -0.3
HOXC10-205ENST00000515593 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
HOXC10-205ENST00000515593 ZMYM3Q14202 1370 aa13.15□□□□□ -0.3
HOXC10-205ENST00000515593 REREQ9P2R6 1566 aa13.15□□□□□ -0.3
HOXC10-205ENST00000515593 EEA1Q15075 1411 aa13.14□□□□□ -0.31
HOXC10-205ENST00000515593 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
HOXC10-205ENST00000515593 HSPA1LP34931 641 aa13.14□□□□□ -0.31
HOXC10-205ENST00000515593 CLIP1P30622 1438 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 AGLP35573 1532 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 LRRIQ1Q96JM4 1722 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 KIDINS220Q9ULH0 1771 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 SENP3Q9H4L4 574 aaPredicted RBP13.12□□□□□ -0.31
HOXC10-205ENST00000515593 CNTLNQ9NXG0 1405 aa13.12□□□□□ -0.31
HOXC10-205ENST00000515593 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
HOXC10-205ENST00000515593 PKD2Q13563 968 aa13.11□□□□□ -0.31
HOXC10-205ENST00000515593 GGT6Q6P531 493 aa13.11□□□□□ -0.31
HOXC10-205ENST00000515593 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
HOXC10-205ENST00000515593 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
HOXC10-205ENST00000515593 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.31
HOXC10-205ENST00000515593 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
HOXC10-205ENST00000515593 ABCC1P33527 1531 aa13.09□□□□□ -0.31
HOXC10-205ENST00000515593 NPATQ14207 1427 aa13.08□□□□□ -0.32
HOXC10-205ENST00000515593 PHF23Q9BUL5 403 aaPredicted RBP13.08□□□□□ -0.32
HOXC10-205ENST00000515593 PREX2Q70Z35 1606 aa13.08□□□□□ -0.32
HOXC10-205ENST00000515593 TOM1O60784 492 aa13.07□□□□□ -0.32
HOXC10-205ENST00000515593 MROH2AA6NES4 1674 aa13.07□□□□□ -0.32
HOXC10-205ENST00000515593 SPAG9O60271 1321 aaKnown RBP13.07□□□□□ -0.32
HOXC10-205ENST00000515593 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
HOXC10-205ENST00000515593 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
HOXC10-205ENST00000515593 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
HOXC10-205ENST00000515593 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
HOXC10-205ENST00000515593 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
HOXC10-205ENST00000515593 PTPRKQ15262 1439 aa13.03□□□□□ -0.32
HOXC10-205ENST00000515593 PLA2R1Q13018 1463 aa13.03□□□□□ -0.32
HOXC10-205ENST00000515593 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
HOXC10-205ENST00000515593 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.33
HOXC10-205ENST00000515593 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
HOXC10-205ENST00000515593 A2MP01023 1474 aa13□□□□□ -0.33
HOXC10-205ENST00000515593 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
HOXC10-205ENST00000515593 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
HOXC10-205ENST00000515593 ATP7AQ04656 1500 aa12.98□□□□□ -0.33
HOXC10-205ENST00000515593 CFDP1Q9UEE9 299 aaPredicted RBP12.98□□□□□ -0.33
HOXC10-205ENST00000515593 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
HOXC10-205ENST00000515593 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
HOXC10-205ENST00000515593 A2ML1A8K2U0 1454 aa12.97□□□□□ -0.33
HOXC10-205ENST00000515593 ANKLE2Q86XL3 938 aa12.96□□□□□ -0.33
HOXC10-205ENST00000515593 CCDC18Q5T9S5 1454 aa12.96□□□□□ -0.34
HOXC10-205ENST00000515593 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.34
HOXC10-205ENST00000515593 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.34
HOXC10-205ENST00000515593 CPS1P31327 1500 aa12.95□□□□□ -0.34
HOXC10-205ENST00000515593 LOC105371045A0A1W2PR82 267 aa12.95□□□□□ -0.34
HOXC10-205ENST00000515593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
HOXC10-205ENST00000515593 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
HOXC10-205ENST00000515593 KIF3BO15066 747 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms