RNA–Protein interactions for RNA: ENST00000514682.5

RPS3A-212, Transcript of ribosomal protein S3A, humanhuman

TSL 5 BASIC

Gene RPS3A, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-212ENST00000514682 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
RPS3A-212ENST00000514682 RAPGEF3O95398 923 aa26.11■■□□□ 1.77
RPS3A-212ENST00000514682 RICTORQ6R327 1708 aa26.11■■□□□ 1.77
RPS3A-212ENST00000514682 CDC42BPAQ5VT25 1732 aa26.1■■□□□ 1.77
RPS3A-212ENST00000514682 CDC42BPBQ9Y5S2 1711 aa26.1■■□□□ 1.77
RPS3A-212ENST00000514682 POGZQ7Z3K3 1410 aa26.08■■□□□ 1.77
RPS3A-212ENST00000514682 SCAPERQ9BY12 1400 aa26.07■■□□□ 1.76
RPS3A-212ENST00000514682 ZMYM4Q5VZL5 1548 aa26.06■■□□□ 1.76
RPS3A-212ENST00000514682 MAP3K1Q13233 1512 aa26.05■■□□□ 1.76
RPS3A-212ENST00000514682 GPATCH8Q9UKJ3 1502 aaKnown RBP26.05■■□□□ 1.76
RPS3A-212ENST00000514682 CCNB3Q8WWL7 1395 aa26.04■■□□□ 1.76
RPS3A-212ENST00000514682 ABCC1P33527 1531 aa26.04■■□□□ 1.76
RPS3A-212ENST00000514682 ARHGEF40Q8TER5 1519 aa26.03■■□□□ 1.76
RPS3A-212ENST00000514682 LRRC9Q6ZRR7 1453 aa26.02■■□□□ 1.76
RPS3A-212ENST00000514682 SUPT6HQ7KZ85 1726 aaKnown RBP26.02■■□□□ 1.76
RPS3A-212ENST00000514682 ITSN2Q9NZM3 1697 aa25.99■■□□□ 1.75
RPS3A-212ENST00000514682 NCOA2Q15596 1464 aa25.99■■□□□ 1.75
RPS3A-212ENST00000514682 ZNF518AQ6AHZ1 1483 aa25.98■■□□□ 1.75
RPS3A-212ENST00000514682 SAMD9LQ8IVG5 1584 aa25.98■■□□□ 1.75
RPS3A-212ENST00000514682 ZFYVE16Q7Z3T8 1539 aa25.97■■□□□ 1.75
RPS3A-212ENST00000514682 MAGI2Q86UL8 1455 aa25.96■■□□□ 1.75
RPS3A-212ENST00000514682 KDM5CP41229 1560 aa25.95■■□□□ 1.75
RPS3A-212ENST00000514682 ARHGEF12Q9NZN5 1544 aa25.94■■□□□ 1.74
RPS3A-212ENST00000514682 CFDP1Q9UEE9 299 aaPredicted RBP25.94■■□□□ 1.74
RPS3A-212ENST00000514682 SYCP2Q9BX26 1530 aa25.93■■□□□ 1.74
RPS3A-212ENST00000514682 ZNF777Q9ULD5 760 aaPredicted RBP25.92■■□□□ 1.74
RPS3A-212ENST00000514682 PLEKHH2Q8IVE3 1493 aa25.91■■□□□ 1.74
RPS3A-212ENST00000514682 YEATS2Q9ULM3 1422 aa25.91■■□□□ 1.74
RPS3A-212ENST00000514682 APLP2Q06481 763 aa25.91■■□□□ 1.74
RPS3A-212ENST00000514682 TRAPPC8Q9Y2L5 1435 aa25.89■■□□□ 1.74
RPS3A-212ENST00000514682 KANK4Q5T7N3 995 aaPredicted RBP25.89■■□□□ 1.74
RPS3A-212ENST00000514682 HECW2Q9P2P5 1572 aa25.89■■□□□ 1.73
RPS3A-212ENST00000514682 KDM4FA0A1W2PPD8 638 aa25.88■■□□□ 1.73
RPS3A-212ENST00000514682 AFAP1Q8N556 730 aa25.87■■□□□ 1.73
RPS3A-212ENST00000514682 KIAA1107Q9UPP5 1409 aa25.87■■□□□ 1.73
RPS3A-212ENST00000514682 MLH3Q9UHC1 1453 aa25.83■■□□□ 1.73
RPS3A-212ENST00000514682 CAMSAP2Q08AD1 1489 aa25.8■■□□□ 1.72
RPS3A-212ENST00000514682 DIP2CQ9Y2E4 1556 aa25.8■■□□□ 1.72
RPS3A-212ENST00000514682 C9orf84Q5VXU9 1444 aa25.8■■□□□ 1.72
RPS3A-212ENST00000514682 ATP10AO60312 1499 aa25.79■■□□□ 1.72
RPS3A-212ENST00000514682 ABCA6Q8N139 1617 aa25.79■■□□□ 1.72
RPS3A-212ENST00000514682 ZNF644Q9H582 1327 aaPredicted RBP25.79■■□□□ 1.72
RPS3A-212ENST00000514682 HNRNPMP52272 730 aaKnown RBP eCLIP25.78■■□□□ 1.723e-8■■■□□ 16.8
RPS3A-212ENST00000514682 MYOM3Q5VTT5 1437 aa25.78■■□□□ 1.72
RPS3A-212ENST00000514682 MYT1LQ9UL68 1186 aa25.77■■□□□ 1.72
RPS3A-212ENST00000514682 ARID4BQ4LE39 1312 aaPredicted RBP25.77■■□□□ 1.72
RPS3A-212ENST00000514682 SIGLEC1Q9BZZ2 1709 aa25.77■■□□□ 1.72
RPS3A-212ENST00000514682 BCORL1Q5H9F3 1711 aa25.76■■□□□ 1.71
RPS3A-212ENST00000514682 KIDINS220Q9ULH0 1771 aa25.75■■□□□ 1.71
RPS3A-212ENST00000514682 MBD5Q9P267 1494 aa25.75■■□□□ 1.71
RPS3A-212ENST00000514682 INO80Q9ULG1 1556 aaPredicted RBP25.74■■□□□ 1.71
RPS3A-212ENST00000514682 REREQ9P2R6 1566 aa25.73■■□□□ 1.71
RPS3A-212ENST00000514682 ATP7AQ04656 1500 aa25.73■■□□□ 1.71
RPS3A-212ENST00000514682 SPAG9O60271 1321 aaKnown RBP25.73■■□□□ 1.71
RPS3A-212ENST00000514682 ADAMTSL3P82987 1691 aa25.73■■□□□ 1.71
RPS3A-212ENST00000514682 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
RPS3A-212ENST00000514682 CCDC141Q6ZP82 1450 aa25.72■■□□□ 1.71
RPS3A-212ENST00000514682 ARHGEF5Q12774 1597 aa25.69■■□□□ 1.7
RPS3A-212ENST00000514682 MADDQ8WXG6 1647 aa25.68■■□□□ 1.7
RPS3A-212ENST00000514682 AGLP35573 1532 aa25.63■■□□□ 1.69
RPS3A-212ENST00000514682 FGD6Q6ZV73 1430 aa25.63■■□□□ 1.69
RPS3A-212ENST00000514682 PTPN23Q9H3S7 1636 aa25.62■■□□□ 1.69
RPS3A-212ENST00000514682 RTEL1-TNFRSF6BF6WH68 1400 aa25.61■■□□□ 1.69
RPS3A-212ENST00000514682 MLECQ14165 292 aa25.6■■□□□ 1.69
RPS3A-212ENST00000514682 RSPH4AQ5TD94 716 aa25.6■■□□□ 1.69
RPS3A-212ENST00000514682 PLXNC1O60486 1568 aa25.6■■□□□ 1.69
RPS3A-212ENST00000514682 PTPRMP28827 1452 aa25.6■■□□□ 1.69
RPS3A-212ENST00000514682 RIMS1Q86UR5 1692 aaKnown RBP25.59■■□□□ 1.69
RPS3A-212ENST00000514682 ADGBQ8N7X0 1667 aa25.58■■□□□ 1.69
RPS3A-212ENST00000514682 A2MP01023 1474 aa25.58■■□□□ 1.69
RPS3A-212ENST00000514682 FER1L4A9Z1Z3 1794 aa25.57■■□□□ 1.68
RPS3A-212ENST00000514682 TCOF1Q13428 1488 aaKnown RBP25.57■■□□□ 1.68
RPS3A-212ENST00000514682 MAST1Q9Y2H9 1570 aa25.55■■□□□ 1.68
RPS3A-212ENST00000514682 TSPY4P0CV99 314 aa25.51■■□□□ 1.67
RPS3A-212ENST00000514682 TSPY10P0CW01 314 aa25.51■■□□□ 1.67
RPS3A-212ENST00000514682 CROCC2H7BZ55 1655 aa25.51■■□□□ 1.67
RPS3A-212ENST00000514682 SHANK2Q9UPX8 1470 aa25.5■■□□□ 1.67
RPS3A-212ENST00000514682 DNMT1P26358 1616 aaKnown RBP25.49■■□□□ 1.67
RPS3A-212ENST00000514682 ABCC5O15440 1437 aa25.47■■□□□ 1.67
RPS3A-212ENST00000514682 DAPK1P53355 1430 aa25.46■■□□□ 1.67
RPS3A-212ENST00000514682 DHX29Q7Z478 1369 aaKnown RBP25.45■■□□□ 1.67
RPS3A-212ENST00000514682 PPARGC1BQ86YN6 1023 aaKnown RBP25.43■■□□□ 1.66
RPS3A-212ENST00000514682 CNTLNQ9NXG0 1405 aa25.4■■□□□ 1.66
RPS3A-212ENST00000514682 FAM50AQ14320 339 aaKnown RBP25.39■■□□□ 1.66
RPS3A-212ENST00000514682 ESF1Q9H501 851 aaKnown RBP25.39■■□□□ 1.66
RPS3A-212ENST00000514682 PLPPR3Q6T4P5 718 aa25.38■■□□□ 1.65
RPS3A-212ENST00000514682 DUOX2Q9NRD8 1548 aa25.36■■□□□ 1.65
RPS3A-212ENST00000514682 KIF15Q9NS87 1388 aa25.35■■□□□ 1.65
RPS3A-212ENST00000514682 MROH2AA6NES4 1674 aa25.35■■□□□ 1.65
RPS3A-212ENST00000514682 EIF2AK4Q9P2K8 1649 aaKnown RBP25.34■■□□□ 1.65
RPS3A-212ENST00000514682 GGT6Q6P531 493 aa25.34■■□□□ 1.65
RPS3A-212ENST00000514682 C3P01024 1663 aa25.33■■□□□ 1.65
RPS3A-212ENST00000514682 KIF3BO15066 747 aa25.33■■□□□ 1.65
RPS3A-212ENST00000514682 CLTCQ00610 1675 aaKnown RBP25.32■■□□□ 1.64
RPS3A-212ENST00000514682 FAM135AQ9P2D6 1515 aa25.32■■□□□ 1.64
RPS3A-212ENST00000514682 RNF17Q9BXT8 1623 aaKnown RBP25.31■■□□□ 1.64
RPS3A-212ENST00000514682 ADGRL2O95490 1459 aa25.31■■□□□ 1.64
RPS3A-212ENST00000514682 ANKRD30AQ9BXX3 1397 aa25.31■■□□□ 1.64
RPS3A-212ENST00000514682 ERBINQ96RT1 1412 aa25.29■■□□□ 1.64
RPS3A-212ENST00000514682 CEBPAP49715 358 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms