RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SOCS7O14512 581 aa17.92■□□□□ 0.46
CLDND1-227ENST00000513452 PREX1Q8TCU6 1659 aa17.91■□□□□ 0.46
CLDND1-227ENST00000513452 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-227ENST00000513452 ARHGEF12Q9NZN5 1544 aa17.89■□□□□ 0.45
CLDND1-227ENST00000513452 SCAPERQ9BY12 1400 aa17.86■□□□□ 0.45
CLDND1-227ENST00000513452 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
CLDND1-227ENST00000513452 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
CLDND1-227ENST00000513452 ATP10AO60312 1499 aa17.84■□□□□ 0.45
CLDND1-227ENST00000513452 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
CLDND1-227ENST00000513452 STRCQ7RTU9 1775 aa17.84■□□□□ 0.45
CLDND1-227ENST00000513452 CDK13Q14004 1512 aaKnown RBP17.83■□□□□ 0.45
CLDND1-227ENST00000513452 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
CLDND1-227ENST00000513452 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
CLDND1-227ENST00000513452 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
CLDND1-227ENST00000513452 PLCH2O75038 1416 aa17.81■□□□□ 0.44
CLDND1-227ENST00000513452 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
CLDND1-227ENST00000513452 PTPRTO14522 1441 aa17.74■□□□□ 0.43
CLDND1-227ENST00000513452 ZNF518AQ6AHZ1 1483 aa17.74■□□□□ 0.43
CLDND1-227ENST00000513452 EFCAB2Q5VUJ9 269 aa17.73■□□□□ 0.43
CLDND1-227ENST00000513452 KDM5CP41229 1560 aa17.71■□□□□ 0.43
CLDND1-227ENST00000513452 DIP2CQ9Y2E4 1556 aa17.71■□□□□ 0.43
CLDND1-227ENST00000513452 LTBP4Q8N2S1 1624 aa17.71■□□□□ 0.43
CLDND1-227ENST00000513452 C3P01024 1663 aa17.7■□□□□ 0.42
CLDND1-227ENST00000513452 KIF14Q15058 1648 aa17.69■□□□□ 0.42
CLDND1-227ENST00000513452 ARHGAP5Q13017 1502 aa17.69■□□□□ 0.42
CLDND1-227ENST00000513452 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
CLDND1-227ENST00000513452 EEA1Q15075 1411 aa17.68■□□□□ 0.42
CLDND1-227ENST00000513452 AFAP1Q8N556 730 aa17.68■□□□□ 0.42
CLDND1-227ENST00000513452 REREQ9P2R6 1566 aa17.67■□□□□ 0.42
CLDND1-227ENST00000513452 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
CLDND1-227ENST00000513452 ABCA6Q8N139 1617 aa17.67■□□□□ 0.42
CLDND1-227ENST00000513452 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
CLDND1-227ENST00000513452 SETD1BQ9UPS6 1966 aaKnown RBP17.66■□□□□ 0.42
CLDND1-227ENST00000513452 NCOA1Q15788 1441 aa17.64■□□□□ 0.42
CLDND1-227ENST00000513452 ESF1Q9H501 851 aaKnown RBP17.64■□□□□ 0.41
CLDND1-227ENST00000513452 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.41
CLDND1-227ENST00000513452 TROQ12816 1431 aaPredicted RBP17.62■□□□□ 0.41
CLDND1-227ENST00000513452 CDK11AQ9UQ88 783 aaPredicted RBP17.61■□□□□ 0.41
CLDND1-227ENST00000513452 FMN1Q68DA7 1419 aa17.61■□□□□ 0.41
CLDND1-227ENST00000513452 MLH3Q9UHC1 1453 aa17.61■□□□□ 0.41
CLDND1-227ENST00000513452 AGLP35573 1532 aa17.61■□□□□ 0.41
CLDND1-227ENST00000513452 CLIP1P30622 1438 aa17.6■□□□□ 0.41
CLDND1-227ENST00000513452 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.41
CLDND1-227ENST00000513452 ABCC1P33527 1531 aa17.57■□□□□ 0.4
CLDND1-227ENST00000513452 CNTLNQ9NXG0 1405 aa17.57■□□□□ 0.4
CLDND1-227ENST00000513452 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
CLDND1-227ENST00000513452 PREX2Q70Z35 1606 aa17.55■□□□□ 0.4
CLDND1-227ENST00000513452 ZNF335Q9H4Z2 1342 aaPredicted RBP17.55■□□□□ 0.4
CLDND1-227ENST00000513452 UBAP1LF5GYI3 381 aa17.55■□□□□ 0.4
CLDND1-227ENST00000513452 ARHGAP35Q9NRY4 1499 aa17.55■□□□□ 0.4
CLDND1-227ENST00000513452 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
CLDND1-227ENST00000513452 NPATQ14207 1427 aa17.54■□□□□ 0.4
CLDND1-227ENST00000513452 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
CLDND1-227ENST00000513452 KIDINS220Q9ULH0 1771 aa17.53■□□□□ 0.4
CLDND1-227ENST00000513452 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
CLDND1-227ENST00000513452 NCKAP5LQ9HCH0 1330 aa17.52■□□□□ 0.4
CLDND1-227ENST00000513452 MROH2AA6NES4 1674 aa17.52■□□□□ 0.39
CLDND1-227ENST00000513452 MYO3AQ8NEV4 1616 aa17.48■□□□□ 0.39
CLDND1-227ENST00000513452 UBTFP17480 764 aaKnown RBP17.48■□□□□ 0.39
CLDND1-227ENST00000513452 ZMYM3Q14202 1370 aa17.48■□□□□ 0.39
CLDND1-227ENST00000513452 ZNF142P52746 1687 aaPredicted RBP17.48■□□□□ 0.39
CLDND1-227ENST00000513452 SAMD9LQ8IVG5 1584 aa17.46■□□□□ 0.39
CLDND1-227ENST00000513452 PLA2R1Q13018 1463 aa17.46■□□□□ 0.39
CLDND1-227ENST00000513452 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
CLDND1-227ENST00000513452 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
CLDND1-227ENST00000513452 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
CLDND1-227ENST00000513452 PKD2Q13563 968 aa17.44■□□□□ 0.38
CLDND1-227ENST00000513452 CLTCQ00610 1675 aaKnown RBP17.44■□□□□ 0.38
CLDND1-227ENST00000513452 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
CLDND1-227ENST00000513452 CDC42BPAQ5VT25 1732 aa17.43■□□□□ 0.38
CLDND1-227ENST00000513452 SYCP2Q9BX26 1530 aa17.42■□□□□ 0.38
CLDND1-227ENST00000513452 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
CLDND1-227ENST00000513452 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CLDND1-227ENST00000513452 PTPRKQ15262 1439 aa17.4■□□□□ 0.38
CLDND1-227ENST00000513452 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
CLDND1-227ENST00000513452 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
CLDND1-227ENST00000513452 SPAG9O60271 1321 aaKnown RBP17.4■□□□□ 0.38
CLDND1-227ENST00000513452 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
CLDND1-227ENST00000513452 HSPA1LP34931 641 aa17.39■□□□□ 0.37
CLDND1-227ENST00000513452 PLXNC1O60486 1568 aa17.39■□□□□ 0.37
CLDND1-227ENST00000513452 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
CLDND1-227ENST00000513452 CASKIN1Q8WXD9 1431 aa17.37■□□□□ 0.37
CLDND1-227ENST00000513452 A2MP01023 1474 aa17.37■□□□□ 0.37
CLDND1-227ENST00000513452 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
CLDND1-227ENST00000513452 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLDND1-227ENST00000513452 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
CLDND1-227ENST00000513452 GGT6Q6P531 493 aa17.34■□□□□ 0.37
CLDND1-227ENST00000513452 CPS1P31327 1500 aa17.32■□□□□ 0.36
CLDND1-227ENST00000513452 GPATCH8Q9UKJ3 1502 aaKnown RBP17.32■□□□□ 0.36
CLDND1-227ENST00000513452 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
CLDND1-227ENST00000513452 TOM1O60784 492 aa17.31■□□□□ 0.36
CLDND1-227ENST00000513452 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
CLDND1-227ENST00000513452 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
CLDND1-227ENST00000513452 NEURL4Q96JN8 1562 aa17.3■□□□□ 0.36
CLDND1-227ENST00000513452 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
CLDND1-227ENST00000513452 PLEKHH2Q8IVE3 1493 aa17.29■□□□□ 0.36
CLDND1-227ENST00000513452 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
CLDND1-227ENST00000513452 SHANK2Q9UPX8 1470 aa17.29■□□□□ 0.36
CLDND1-227ENST00000513452 ADGBQ8N7X0 1667 aa17.27■□□□□ 0.36
CLDND1-227ENST00000513452 CFDP1Q9UEE9 299 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms