RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 STK26Q9P289 416 aa22.09■■□□□ 1.13
ARHGEF28-212ENST00000513042 HSPA5P11021 654 aaKnown RBP22.08■■□□□ 1.13
ARHGEF28-212ENST00000513042 L1TD1Q5T7N2 865 aaKnown RBP22.08■■□□□ 1.12
ARHGEF28-212ENST00000513042 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
ARHGEF28-212ENST00000513042 FOXD1Q16676 465 aa22.07■■□□□ 1.12
ARHGEF28-212ENST00000513042 GNL2Q13823 731 aaKnown RBP22.07■■□□□ 1.12
ARHGEF28-212ENST00000513042 GZF1Q9H116 711 aaPredicted RBP22.07■■□□□ 1.12
ARHGEF28-212ENST00000513042 RBM19Q9Y4C8 960 aaKnown RBP22.06■■□□□ 1.12
ARHGEF28-212ENST00000513042 RTF1Q92541 710 aaKnown RBP22.05■■□□□ 1.12
ARHGEF28-212ENST00000513042 KANK1Q14678 1352 aa22.04■■□□□ 1.12
ARHGEF28-212ENST00000513042 ITPRIPQ8IWB1 547 aa22.01■■□□□ 1.11
ARHGEF28-212ENST00000513042 ERCC6Q03468 1493 aa22■■□□□ 1.11
ARHGEF28-212ENST00000513042 ZNF330Q9Y3S2 320 aaPredicted RBP22■■□□□ 1.11
ARHGEF28-212ENST00000513042 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
ARHGEF28-212ENST00000513042 SLKQ9H2G2 1235 aaPredicted RBP21.99■■□□□ 1.11
ARHGEF28-212ENST00000513042 KTN1Q86UP2 1357 aaKnown RBP21.98■■□□□ 1.11
ARHGEF28-212ENST00000513042 PAK3O75914 559 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF28-212ENST00000513042 KIAA1211Q6ZU35 1233 aa21.96■■□□□ 1.11
ARHGEF28-212ENST00000513042 CCER2I3L3R5 266 aa21.93■■□□□ 1.1
ARHGEF28-212ENST00000513042 GGT6Q6P531 493 aa21.93■■□□□ 1.1
ARHGEF28-212ENST00000513042 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
ARHGEF28-212ENST00000513042 U2AF1L5P0DN76 240 aaPredicted RBP21.92■■□□□ 1.1
ARHGEF28-212ENST00000513042 MFAP1P55081 439 aaKnown RBP21.92■■□□□ 1.1
ARHGEF28-212ENST00000513042 U2AF1Q01081 240 aaKnown RBP eCLIP21.92■■□□□ 1.17e-6■■■□□ 19.2
ARHGEF28-212ENST00000513042 PKD2Q13563 968 aa21.91■■□□□ 1.1
ARHGEF28-212ENST00000513042 HDGFL2Q7Z4V5 671 aaPredicted RBP21.91■■□□□ 1.1
ARHGEF28-212ENST00000513042 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
ARHGEF28-212ENST00000513042 FOXD4L1Q9NU39 408 aa21.91■■□□□ 1.1
ARHGEF28-212ENST00000513042 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.9■■□□□ 1.1
ARHGEF28-212ENST00000513042 IPO8O15397 1037 aaKnown RBP21.9■■□□□ 1.1
ARHGEF28-212ENST00000513042 GBP4Q96PP9 640 aa21.9■■□□□ 1.1
ARHGEF28-212ENST00000513042 SETD5Q9C0A6 1442 aa21.9■■□□□ 1.1
ARHGEF28-212ENST00000513042 ROCK2O75116 1388 aaKnown RBP21.9■■□□□ 1.1
ARHGEF28-212ENST00000513042 HSP90B1P14625 803 aaKnown RBP21.89■■□□□ 1.1
ARHGEF28-212ENST00000513042 NOL8Q76FK4 1167 aaKnown RBP21.88■■□□□ 1.09
ARHGEF28-212ENST00000513042 CSB-PGBD3P0DP91 1061 aa21.87■■□□□ 1.09
ARHGEF28-212ENST00000513042 HDGFP51858 240 aaKnown RBP21.87■■□□□ 1.09
ARHGEF28-212ENST00000513042 RWDD1Q9H446 243 aaPredicted RBP21.86■■□□□ 1.09
ARHGEF28-212ENST00000513042 FHAD1B1AJZ9 1412 aa21.86■■□□□ 1.09
ARHGEF28-212ENST00000513042 CCDC146Q8IYE0 955 aa21.86■■□□□ 1.09
ARHGEF28-212ENST00000513042 CHMP3Q9Y3E7 222 aa21.85■■□□□ 1.09
ARHGEF28-212ENST00000513042 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
ARHGEF28-212ENST00000513042 CFAP44Q96MT7 982 aa21.85■■□□□ 1.09
ARHGEF28-212ENST00000513042 KIAA2012Q0VF49 1180 aa21.85■■□□□ 1.09
ARHGEF28-212ENST00000513042 PDE4CQ08493 712 aa21.83■■□□□ 1.09
ARHGEF28-212ENST00000513042 NOC3LQ8WTT2 800 aaKnown RBP21.83■■□□□ 1.09
ARHGEF28-212ENST00000513042 TRIM6-TRIM34B2RNG4 842 aa21.83■■□□□ 1.09
ARHGEF28-212ENST00000513042 SOGA1O94964 1423 aa21.82■■□□□ 1.08
ARHGEF28-212ENST00000513042 CUX2O14529 1486 aa21.81■■□□□ 1.08
ARHGEF28-212ENST00000513042 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
ARHGEF28-212ENST00000513042 NUTM2DQ5VT03 806 aaPredicted RBP21.8■■□□□ 1.08
ARHGEF28-212ENST00000513042 SMC4Q9NTJ3 1288 aa21.79■■□□□ 1.08
ARHGEF28-212ENST00000513042 KANK4Q5T7N3 995 aaPredicted RBP21.78■■□□□ 1.08
ARHGEF28-212ENST00000513042 CLUAP1Q96AJ1 413 aa21.78■■□□□ 1.08
ARHGEF28-212ENST00000513042 GORABQ5T7V8 394 aa21.78■■□□□ 1.08
ARHGEF28-212ENST00000513042 FOXD4L5Q5VV16 416 aaPredicted RBP21.78■■□□□ 1.08
ARHGEF28-212ENST00000513042 FOXD4L4Q8WXT5 416 aaPredicted RBP21.78■■□□□ 1.08
ARHGEF28-212ENST00000513042 PTMSP20962 102 aa21.78■■□□□ 1.08
ARHGEF28-212ENST00000513042 SLC4A10Q6U841 1118 aa21.78■■□□□ 1.08
ARHGEF28-212ENST00000513042 CREBRFQ8IUR6 639 aa21.77■■□□□ 1.08
ARHGEF28-212ENST00000513042 PMFBP1Q8TBY8 1022 aa21.76■■□□□ 1.07
ARHGEF28-212ENST00000513042 GOLGA6L3A6NEY3 463 aa21.76■■□□□ 1.07
ARHGEF28-212ENST00000513042 TCERG1O14776 1098 aaKnown RBP21.76■■□□□ 1.07
ARHGEF28-212ENST00000513042 CALD1Q05682 793 aaKnown RBP21.75■■□□□ 1.07
ARHGEF28-212ENST00000513042 RALBP1Q15311 655 aa21.75■■□□□ 1.07
ARHGEF28-212ENST00000513042 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
ARHGEF28-212ENST00000513042 SYAP1Q96A49 352 aaPredicted RBP21.73■■□□□ 1.07
ARHGEF28-212ENST00000513042 STK31Q9BXU1 1019 aa21.73■■□□□ 1.07
ARHGEF28-212ENST00000513042 HTATSF1O43719 755 aaKnown RBP21.72■■□□□ 1.07
ARHGEF28-212ENST00000513042 TAF7LQ5H9L4 462 aa21.72■■□□□ 1.07
ARHGEF28-212ENST00000513042 TPM4P67936 248 aa21.72■■□□□ 1.07
ARHGEF28-212ENST00000513042 GPATCH3Q96I76 525 aa21.71■■□□□ 1.07
ARHGEF28-212ENST00000513042 TIMELESSQ9UNS1 1208 aa21.7■■□□□ 1.06
ARHGEF28-212ENST00000513042 RAB3GAP2Q9H2M9 1393 aa21.7■■□□□ 1.06
ARHGEF28-212ENST00000513042 SPAG9O60271 1321 aaKnown RBP21.7■■□□□ 1.06
ARHGEF28-212ENST00000513042 CCDC9Q9Y3X0 531 aaKnown RBP21.7■■□□□ 1.06
ARHGEF28-212ENST00000513042 ANO8Q9HCE9 1232 aaPredicted RBP21.69■■□□□ 1.06
ARHGEF28-212ENST00000513042 NUP155O75694 1391 aa21.69■■□□□ 1.06
ARHGEF28-212ENST00000513042 TSHZ2Q9NRE2 1034 aa21.68■■□□□ 1.06
ARHGEF28-212ENST00000513042 RASSF8Q8NHQ8 419 aa21.68■■□□□ 1.06
ARHGEF28-212ENST00000513042 IPO9Q96P70 1041 aaKnown RBP21.67■■□□□ 1.06
ARHGEF28-212ENST00000513042 LTV1Q96GA3 475 aaPredicted RBP21.66■■□□□ 1.06
ARHGEF28-212ENST00000513042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.66■■□□□ 1.061e-6■■■□□ 17.8
ARHGEF28-212ENST00000513042 PRM3Q9NNZ6 103 aa21.66■■□□□ 1.06
ARHGEF28-212ENST00000513042 RRP7AQ9Y3A4 280 aaKnown RBP21.65■■□□□ 1.06
ARHGEF28-212ENST00000513042 A0A0U1RQG5 324 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF28-212ENST00000513042 CENPJQ9HC77 1338 aaPredicted RBP21.64■■□□□ 1.05
ARHGEF28-212ENST00000513042 EIF3AQ14152 1382 aaKnown RBP21.64■■□□□ 1.05
ARHGEF28-212ENST00000513042 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
ARHGEF28-212ENST00000513042 TOMM22Q9NS69 142 aa21.63■■□□□ 1.05
ARHGEF28-212ENST00000513042 NUTM2FA1L443 756 aa21.63■■□□□ 1.05
ARHGEF28-212ENST00000513042 TMX4Q9H1E5 349 aaPredicted RBP21.62■■□□□ 1.05
ARHGEF28-212ENST00000513042 HMMRO75330 724 aa21.62■■□□□ 1.05
ARHGEF28-212ENST00000513042 VPS8Q8N3P4 1428 aa21.6■■□□□ 1.05
ARHGEF28-212ENST00000513042 TNNT3P45378 269 aaPredicted RBP21.59■■□□□ 1.05
ARHGEF28-212ENST00000513042 SLC4A3P48751 1232 aa21.59■■□□□ 1.05
ARHGEF28-212ENST00000513042 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.052e-6■■■□□ 18.2
ARHGEF28-212ENST00000513042 FOXD4L6Q3SYB3 417 aaPredicted RBP21.59■■□□□ 1.05
ARHGEF28-212ENST00000513042 FOXD4L3Q6VB84 417 aaPredicted RBP21.59■■□□□ 1.05
ARHGEF28-212ENST00000513042 G3V3G9 751 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms