RNA–Protein interactions for RNA: ENST00000511697.1

CALCOCO2-219, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-219ENST00000511697 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
CALCOCO2-219ENST00000511697 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
CALCOCO2-219ENST00000511697 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
CALCOCO2-219ENST00000511697 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
CALCOCO2-219ENST00000511697 RIMS1Q86UR5 1692 aaKnown RBP16.35■□□□□ 0.21
CALCOCO2-219ENST00000511697 ZMYM4Q5VZL5 1548 aa16.34■□□□□ 0.21
CALCOCO2-219ENST00000511697 SIGLEC1Q9BZZ2 1709 aa16.33■□□□□ 0.21
CALCOCO2-219ENST00000511697 MYO5CQ9NQX4 1742 aa16.33■□□□□ 0.21
CALCOCO2-219ENST00000511697 ZFYVE16Q7Z3T8 1539 aa16.33■□□□□ 0.2
CALCOCO2-219ENST00000511697 KIF14Q15058 1648 aa16.32■□□□□ 0.2
CALCOCO2-219ENST00000511697 LRRIQ1Q96JM4 1722 aa16.32■□□□□ 0.2
CALCOCO2-219ENST00000511697 PLCH2O75038 1416 aa16.31■□□□□ 0.2
CALCOCO2-219ENST00000511697 YEATS2Q9ULM3 1422 aa16.31■□□□□ 0.2
CALCOCO2-219ENST00000511697 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
CALCOCO2-219ENST00000511697 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
CALCOCO2-219ENST00000511697 PCF11O94913 1555 aaKnown RBP16.27■□□□□ 0.2
CALCOCO2-219ENST00000511697 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
CALCOCO2-219ENST00000511697 MAGI2Q86UL8 1455 aa16.26■□□□□ 0.19
CALCOCO2-219ENST00000511697 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
CALCOCO2-219ENST00000511697 LMTK3Q96Q04 1460 aa16.25■□□□□ 0.19
CALCOCO2-219ENST00000511697 MLECQ14165 292 aa16.25■□□□□ 0.19
CALCOCO2-219ENST00000511697 TROQ12816 1431 aaPredicted RBP16.25■□□□□ 0.19
CALCOCO2-219ENST00000511697 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
CALCOCO2-219ENST00000511697 EFCAB2Q5VUJ9 269 aa16.24■□□□□ 0.19
CALCOCO2-219ENST00000511697 CLIP1P30622 1438 aa16.24■□□□□ 0.19
CALCOCO2-219ENST00000511697 CDC42BPBQ9Y5S2 1711 aa16.21■□□□□ 0.19
CALCOCO2-219ENST00000511697 ATP10AO60312 1499 aa16.2■□□□□ 0.18
CALCOCO2-219ENST00000511697 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
CALCOCO2-219ENST00000511697 ZNF518AQ6AHZ1 1483 aa16.19■□□□□ 0.18
CALCOCO2-219ENST00000511697 PREX2Q70Z35 1606 aa16.18■□□□□ 0.18
CALCOCO2-219ENST00000511697 CASKIN1Q8WXD9 1431 aa16.18■□□□□ 0.18
CALCOCO2-219ENST00000511697 KDM5CP41229 1560 aa16.17■□□□□ 0.18
CALCOCO2-219ENST00000511697 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
CALCOCO2-219ENST00000511697 HSPA2P54652 639 aa16.17■□□□□ 0.18
CALCOCO2-219ENST00000511697 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
CALCOCO2-219ENST00000511697 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
CALCOCO2-219ENST00000511697 MYT1LQ9UL68 1186 aa16.17■□□□□ 0.18
CALCOCO2-219ENST00000511697 ARHGEF12Q9NZN5 1544 aa16.16■□□□□ 0.18
CALCOCO2-219ENST00000511697 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
CALCOCO2-219ENST00000511697 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
CALCOCO2-219ENST00000511697 DIP2CQ9Y2E4 1556 aa16.14■□□□□ 0.17
CALCOCO2-219ENST00000511697 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.17
CALCOCO2-219ENST00000511697 ABCC1P33527 1531 aa16.14■□□□□ 0.17
CALCOCO2-219ENST00000511697 ABCA6Q8N139 1617 aa16.13■□□□□ 0.17
CALCOCO2-219ENST00000511697 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
CALCOCO2-219ENST00000511697 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
CALCOCO2-219ENST00000511697 FBXO41Q8TF61 875 aa16.12■□□□□ 0.17
CALCOCO2-219ENST00000511697 PREX1Q8TCU6 1659 aa16.11■□□□□ 0.17
CALCOCO2-219ENST00000511697 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
CALCOCO2-219ENST00000511697 CEBPAP49715 358 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO2-219ENST00000511697 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
CALCOCO2-219ENST00000511697 REREQ9P2R6 1566 aa16.08■□□□□ 0.16
CALCOCO2-219ENST00000511697 KIDINS220Q9ULH0 1771 aa16.07■□□□□ 0.16
CALCOCO2-219ENST00000511697 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
CALCOCO2-219ENST00000511697 SAMD9LQ8IVG5 1584 aa16.05■□□□□ 0.16
CALCOCO2-219ENST00000511697 C3P01024 1663 aa16.05■□□□□ 0.16
CALCOCO2-219ENST00000511697 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
CALCOCO2-219ENST00000511697 AGLP35573 1532 aa16.02■□□□□ 0.15
CALCOCO2-219ENST00000511697 GPATCH8Q9UKJ3 1502 aaKnown RBP16.02■□□□□ 0.15
CALCOCO2-219ENST00000511697 SETD1BQ9UPS6 1966 aaKnown RBP16.01■□□□□ 0.15
CALCOCO2-219ENST00000511697 UHRF1BP1Q6BDS2 1440 aa16.01■□□□□ 0.15
CALCOCO2-219ENST00000511697 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
CALCOCO2-219ENST00000511697 STRCQ7RTU9 1775 aa16■□□□□ 0.15
CALCOCO2-219ENST00000511697 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
CALCOCO2-219ENST00000511697 HNRNPMP52272 730 aaKnown RBP eCLIP15.98■□□□□ 0.15
CALCOCO2-219ENST00000511697 CCNB3Q8WWL7 1395 aa15.98■□□□□ 0.15
CALCOCO2-219ENST00000511697 ATP7AQ04656 1500 aa15.97■□□□□ 0.15
CALCOCO2-219ENST00000511697 MTUS2Q5JR59 1369 aa15.97■□□□□ 0.15
CALCOCO2-219ENST00000511697 SPAG9O60271 1321 aaKnown RBP15.96■□□□□ 0.15
CALCOCO2-219ENST00000511697 CFDP1Q9UEE9 299 aaPredicted RBP15.96■□□□□ 0.15
CALCOCO2-219ENST00000511697 INO80Q9ULG1 1556 aaPredicted RBP15.96■□□□□ 0.14
CALCOCO2-219ENST00000511697 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
CALCOCO2-219ENST00000511697 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
CALCOCO2-219ENST00000511697 PLEKHH2Q8IVE3 1493 aa15.94■□□□□ 0.14
CALCOCO2-219ENST00000511697 TIAM1Q13009 1591 aa15.94■□□□□ 0.14
CALCOCO2-219ENST00000511697 MROH2AA6NES4 1674 aa15.93■□□□□ 0.14
CALCOCO2-219ENST00000511697 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
CALCOCO2-219ENST00000511697 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
CALCOCO2-219ENST00000511697 KIAA1107Q9UPP5 1409 aa15.93■□□□□ 0.14
CALCOCO2-219ENST00000511697 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
CALCOCO2-219ENST00000511697 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
CALCOCO2-219ENST00000511697 PLXNC1O60486 1568 aa15.92■□□□□ 0.14
CALCOCO2-219ENST00000511697 A2MP01023 1474 aa15.91■□□□□ 0.14
CALCOCO2-219ENST00000511697 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
CALCOCO2-219ENST00000511697 ZNF644Q9H582 1327 aaPredicted RBP15.9■□□□□ 0.14
CALCOCO2-219ENST00000511697 ADGBQ8N7X0 1667 aa15.89■□□□□ 0.13
CALCOCO2-219ENST00000511697 ZMYM3Q14202 1370 aa15.87■□□□□ 0.13
CALCOCO2-219ENST00000511697 GGT6Q6P531 493 aa15.86■□□□□ 0.13
CALCOCO2-219ENST00000511697 NPATQ14207 1427 aa15.85■□□□□ 0.13
CALCOCO2-219ENST00000511697 CAMSAP1Q5T5Y3 1602 aa15.85■□□□□ 0.13
CALCOCO2-219ENST00000511697 MYO3AQ8NEV4 1616 aa15.85■□□□□ 0.13
CALCOCO2-219ENST00000511697 PTPRTO14522 1441 aa15.85■□□□□ 0.13
CALCOCO2-219ENST00000511697 NCOA1Q15788 1441 aa15.85■□□□□ 0.13
CALCOCO2-219ENST00000511697 MBD5Q9P267 1494 aa15.84■□□□□ 0.13
CALCOCO2-219ENST00000511697 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.12
CALCOCO2-219ENST00000511697 NCOA2Q15596 1464 aa15.82■□□□□ 0.12
CALCOCO2-219ENST00000511697 CAMSAP2Q08AD1 1489 aa15.81■□□□□ 0.12
CALCOCO2-219ENST00000511697 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
CALCOCO2-219ENST00000511697 CEP170BQ9Y4F5 1589 aaPredicted RBP15.79■□□□□ 0.12
CALCOCO2-219ENST00000511697 CCDC141Q6ZP82 1450 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms