RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 MCCP23508 829 aa10.68□□□□□ -0.7
CAST-232ENST00000510500 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
CAST-232ENST00000510500 GTF2E1P29083 439 aaPredicted RBP10.66□□□□□ -0.7
CAST-232ENST00000510500 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
CAST-232ENST00000510500 MFAP1P55081 439 aaKnown RBP10.66□□□□□ -0.7
CAST-232ENST00000510500 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
CAST-232ENST00000510500 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
CAST-232ENST00000510500 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
CAST-232ENST00000510500 MYO15BQ96JP2 1530 aa10.66□□□□□ -0.7
CAST-232ENST00000510500 PTMSP20962 102 aa10.65□□□□□ -0.71
CAST-232ENST00000510500 NEFMP07197 916 aa10.64□□□□□ -0.71
CAST-232ENST00000510500 PRDM16Q9HAZ2 1276 aa10.64□□□□□ -0.71
CAST-232ENST00000510500 CUX2O14529 1486 aa10.63□□□□□ -0.71
CAST-232ENST00000510500 VGFO15240 615 aaPredicted RBP10.63□□□□□ -0.71
CAST-232ENST00000510500 PTMAP06454 111 aaKnown RBP10.63□□□□□ -0.71
CAST-232ENST00000510500 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
CAST-232ENST00000510500 CANXP27824 592 aaKnown RBP10.61□□□□□ -0.71
CAST-232ENST00000510500 WWC1Q8IX03 1113 aa10.61□□□□□ -0.71
CAST-232ENST00000510500 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
CAST-232ENST00000510500 KCNG1Q9UIX4 513 aa10.6□□□□□ -0.71
CAST-232ENST00000510500 CNGB1Q14028 1251 aaPredicted RBP10.59□□□□□ -0.71
CAST-232ENST00000510500 CCDC27Q2M243 656 aa10.59□□□□□ -0.71
CAST-232ENST00000510500 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
CAST-232ENST00000510500 C11orf95C9JLR9 678 aaPredicted RBP10.58□□□□□ -0.72
CAST-232ENST00000510500 RRP9O43818 475 aaKnown RBP10.58□□□□□ -0.72
CAST-232ENST00000510500 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
CAST-232ENST00000510500 FANCIQ9NVI1 1328 aa10.58□□□□□ -0.72
CAST-232ENST00000510500 CCDC125Q86Z20 511 aa10.57□□□□□ -0.72
CAST-232ENST00000510500 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
CAST-232ENST00000510500 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
CAST-232ENST00000510500 HAX1O00165 279 aa10.55□□□□□ -0.72
CAST-232ENST00000510500 RTL5Q5HYW3 569 aaPredicted RBP10.55□□□□□ -0.72
CAST-232ENST00000510500 ZNF526Q8TF50 670 aaPredicted RBP10.54□□□□□ -0.72
CAST-232ENST00000510500 MAFGO15525 162 aa10.54□□□□□ -0.72
CAST-232ENST00000510500 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
CAST-232ENST00000510500 CLGNO14967 610 aa10.53□□□□□ -0.72
CAST-232ENST00000510500 CALD1Q05682 793 aaKnown RBP10.53□□□□□ -0.72
CAST-232ENST00000510500 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
CAST-232ENST00000510500 PRDM4Q9UKN5 801 aa10.52□□□□□ -0.73
CAST-232ENST00000510500 FAM43BQ6ZT52 329 aaPredicted RBP10.51□□□□□ -0.73
CAST-232ENST00000510500 FAM193AP78312 1265 aa10.51□□□□□ -0.73
CAST-232ENST00000510500 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
CAST-232ENST00000510500 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
CAST-232ENST00000510500 SUPT16HQ9Y5B9 1047 aaKnown RBP10.51□□□□□ -0.73
CAST-232ENST00000510500 PHF14O94880 888 aa10.49□□□□□ -0.73
CAST-232ENST00000510500 MMP14P50281 582 aa10.49□□□□□ -0.73
CAST-232ENST00000510500 ANAPC15P60006 121 aa10.49□□□□□ -0.73
CAST-232ENST00000510500 CENPJQ9HC77 1338 aaPredicted RBP10.48□□□□□ -0.73
CAST-232ENST00000510500 ZNF622Q969S3 477 aaKnown RBP eCLIP10.48□□□□□ -0.731e-7■■□□□ 14.4
CAST-232ENST00000510500 RBM19Q9Y4C8 960 aaKnown RBP10.48□□□□□ -0.73
CAST-232ENST00000510500 KDM4AO75164 1064 aa10.47□□□□□ -0.73
CAST-232ENST00000510500 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
CAST-232ENST00000510500 RGL2O15211 777 aa10.46□□□□□ -0.74
CAST-232ENST00000510500 LHX8Q68G74 356 aa10.46□□□□□ -0.74
CAST-232ENST00000510500 SLC24A3Q9HC58 644 aa10.45□□□□□ -0.74
CAST-232ENST00000510500 GPATCH11Q8N954 259 aa10.44□□□□□ -0.74
CAST-232ENST00000510500 TRIM41Q8WV44 630 aa10.44□□□□□ -0.74
CAST-232ENST00000510500 HSP90AA2PQ14568 343 aaPredicted RBP10.43□□□□□ -0.74
CAST-232ENST00000510500 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
CAST-232ENST00000510500 AXDND1Q5T1B0 1012 aaPredicted RBP10.42□□□□□ -0.74
CAST-232ENST00000510500 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
CAST-232ENST00000510500 ERCC6Q03468 1493 aa10.41□□□□□ -0.74
CAST-232ENST00000510500 ANP32BQ92688 251 aaKnown RBP10.4□□□□□ -0.74
CAST-232ENST00000510500 EXOC8Q8IYI6 725 aa10.4□□□□□ -0.75
CAST-232ENST00000510500 HSP90AB4PQ58FF6 505 aa10.39□□□□□ -0.75
CAST-232ENST00000510500 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
CAST-232ENST00000510500 LOC102724159A0A0B4J2E5 919 aa10.37□□□□□ -0.75
CAST-232ENST00000510500 PWP2Q15269 919 aaKnown RBP10.37□□□□□ -0.75
CAST-232ENST00000510500 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
CAST-232ENST00000510500 PATL2C9JE40 543 aaKnown RBP10.37□□□□□ -0.75
CAST-232ENST00000510500 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
CAST-232ENST00000510500 SCRIBQ14160 1630 aa10.37□□□□□ -0.75
CAST-232ENST00000510500 OS9Q13438 667 aaPredicted RBP10.36□□□□□ -0.75
CAST-232ENST00000510500 PLEKHD1A6NEE1 506 aa10.35□□□□□ -0.75
CAST-232ENST00000510500 EVX2Q03828 476 aa10.35□□□□□ -0.75
CAST-232ENST00000510500 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
CAST-232ENST00000510500 DIEXFQ68CQ4 756 aaKnown RBP10.34□□□□□ -0.75
CAST-232ENST00000510500 RIPOR2Q9Y4F9 1068 aa10.34□□□□□ -0.75
CAST-232ENST00000510500 CCER1Q8TC90 406 aaPredicted RBP10.33□□□□□ -0.76
CAST-232ENST00000510500 AMOTL2Q9Y2J4 779 aa10.33□□□□□ -0.76
CAST-232ENST00000510500 ZNF830Q96NB3 372 aaPredicted RBP10.33□□□□□ -0.76
CAST-232ENST00000510500 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
CAST-232ENST00000510500 WASHC2CQ9Y4E1 1318 aa10.32□□□□□ -0.76
CAST-232ENST00000510500 ANKRD13AQ8IZ07 590 aa10.32□□□□□ -0.76
CAST-232ENST00000510500 FAM43AQ8N2R8 423 aa10.32□□□□□ -0.76
CAST-232ENST00000510500 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.764e-6■■□□□ 13.4
CAST-232ENST00000510500 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
CAST-232ENST00000510500 CEP120Q8N960 986 aa10.31□□□□□ -0.76
CAST-232ENST00000510500 HDAC5Q9UQL6 1122 aa10.31□□□□□ -0.76
CAST-232ENST00000510500 IRX3P78415 501 aaPredicted RBP10.3□□□□□ -0.76
CAST-232ENST00000510500 TRIM44Q96DX7 344 aaPredicted RBP10.3□□□□□ -0.76
CAST-232ENST00000510500 NOL8Q76FK4 1167 aaKnown RBP10.29□□□□□ -0.76
CAST-232ENST00000510500 P3H3Q8IVL6 736 aa10.29□□□□□ -0.76
CAST-232ENST00000510500 TMEM51Q9NW97 253 aa10.28□□□□□ -0.76
CAST-232ENST00000510500 NBPF20Q3BBV1 942 aa10.28□□□□□ -0.76
CAST-232ENST00000510500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
CAST-232ENST00000510500 SMARCA5O60264 1052 aaPredicted RBP10.27□□□□□ -0.77
CAST-232ENST00000510500 PSEN1P49768 467 aa10.27□□□□□ -0.77
CAST-232ENST00000510500 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
CAST-232ENST00000510500 SPATA32Q96LK8 384 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms