RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 NRDCO43847 1150 aa11.39□□□□□ -0.59
ARHGEF28-210ENST00000510312 RBM19Q9Y4C8 960 aaKnown RBP11.39□□□□□ -0.59
ARHGEF28-210ENST00000510312 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
ARHGEF28-210ENST00000510312 SPRYD3Q8NCJ5 442 aa11.38□□□□□ -0.59
ARHGEF28-210ENST00000510312 CHMP3Q9Y3E7 222 aa11.38□□□□□ -0.59
ARHGEF28-210ENST00000510312 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
ARHGEF28-210ENST00000510312 TMF1P82094 1093 aa11.37□□□□□ -0.59
ARHGEF28-210ENST00000510312 PRM3Q9NNZ6 103 aa11.37□□□□□ -0.59
ARHGEF28-210ENST00000510312 GOLGA6L6A8MZA4 724 aa11.36□□□□□ -0.59
ARHGEF28-210ENST00000510312 GNL2Q13823 731 aaKnown RBP11.36□□□□□ -0.59
ARHGEF28-210ENST00000510312 GOLGA3Q08378 1498 aa11.36□□□□□ -0.59
ARHGEF28-210ENST00000510312 MSH5O43196 834 aa11.35□□□□□ -0.59
ARHGEF28-210ENST00000510312 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
ARHGEF28-210ENST00000510312 HDGFL2Q7Z4V5 671 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF28-210ENST00000510312 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
ARHGEF28-210ENST00000510312 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF28-210ENST00000510312 HSP90AA2PQ14568 343 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF28-210ENST00000510312 TAF7LQ5H9L4 462 aa11.33□□□□□ -0.6
ARHGEF28-210ENST00000510312 CCER2I3L3R5 266 aa11.33□□□□□ -0.6
ARHGEF28-210ENST00000510312 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF28-210ENST00000510312 KIF27Q86VH2 1401 aa11.33□□□□□ -0.6
ARHGEF28-210ENST00000510312 GOLGA6L4A6NEF3 574 aa11.32□□□□□ -0.6
ARHGEF28-210ENST00000510312 PDE4CQ08493 712 aa11.32□□□□□ -0.6
ARHGEF28-210ENST00000510312 MEX3CQ5U5Q3 659 aaKnown RBP11.32□□□□□ -0.6
ARHGEF28-210ENST00000510312 EEA1Q15075 1411 aa11.32□□□□□ -0.6
ARHGEF28-210ENST00000510312 FOXD1Q16676 465 aa11.31□□□□□ -0.6
ARHGEF28-210ENST00000510312 PHF23Q9BUL5 403 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF28-210ENST00000510312 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
ARHGEF28-210ENST00000510312 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
ARHGEF28-210ENST00000510312 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
ARHGEF28-210ENST00000510312 GORABQ5T7V8 394 aa11.3□□□□□ -0.6
ARHGEF28-210ENST00000510312 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
ARHGEF28-210ENST00000510312 WRNQ14191 1432 aaPredicted RBP eCLIP11.29□□□□□ -0.6
ARHGEF28-210ENST00000510312 DRC7Q8IY82 874 aa11.29□□□□□ -0.6
ARHGEF28-210ENST00000510312 B4GALNT3Q6L9W6 998 aa11.29□□□□□ -0.6
ARHGEF28-210ENST00000510312 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
ARHGEF28-210ENST00000510312 MCCP23508 829 aa11.28□□□□□ -0.6
ARHGEF28-210ENST00000510312 EID1Q9Y6B2 187 aa11.28□□□□□ -0.6
ARHGEF28-210ENST00000510312 MS4A1P11836 297 aa11.28□□□□□ -0.6
ARHGEF28-210ENST00000510312 EVA1CP58658 441 aa11.28□□□□□ -0.6
ARHGEF28-210ENST00000510312 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
ARHGEF28-210ENST00000510312 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.6
ARHGEF28-210ENST00000510312 TNNT3P45378 269 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF28-210ENST00000510312 MTERF4Q7Z6M4 381 aaKnown RBP11.27□□□□□ -0.61
ARHGEF28-210ENST00000510312 VPS53Q5VIR6 699 aa11.26□□□□□ -0.61
ARHGEF28-210ENST00000510312 GTF2E1P29083 439 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF28-210ENST00000510312 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF28-210ENST00000510312 MAP7D2Q96T17 732 aa11.25□□□□□ -0.61
ARHGEF28-210ENST00000510312 TCERG1O14776 1098 aaKnown RBP11.25□□□□□ -0.61
ARHGEF28-210ENST00000510312 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
ARHGEF28-210ENST00000510312 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
ARHGEF28-210ENST00000510312 HSCBQ8IWL3 235 aa11.24□□□□□ -0.61
ARHGEF28-210ENST00000510312 KIAA1211Q6ZU35 1233 aa11.24□□□□□ -0.61
ARHGEF28-210ENST00000510312 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
ARHGEF28-210ENST00000510312 KIAA2012Q0VF49 1180 aa11.24□□□□□ -0.61
ARHGEF28-210ENST00000510312 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF28-210ENST00000510312 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.617e-6■■■□□ 19.2
ARHGEF28-210ENST00000510312 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.23□□□□□ -0.61
ARHGEF28-210ENST00000510312 SLC4A10Q6U841 1118 aa11.23□□□□□ -0.61
ARHGEF28-210ENST00000510312 AMPHP49418 695 aa11.22□□□□□ -0.61
ARHGEF28-210ENST00000510312 PKD2Q13563 968 aa11.22□□□□□ -0.61
ARHGEF28-210ENST00000510312 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
ARHGEF28-210ENST00000510312 CUX2O14529 1486 aa11.22□□□□□ -0.61
ARHGEF28-210ENST00000510312 ITPRIPQ8IWB1 547 aa11.22□□□□□ -0.61
ARHGEF28-210ENST00000510312 KIF3BO15066 747 aa11.22□□□□□ -0.61
ARHGEF28-210ENST00000510312 CREBRFQ8IUR6 639 aa11.22□□□□□ -0.61
ARHGEF28-210ENST00000510312 HNRNPMP52272 730 aaKnown RBP eCLIP11.22□□□□□ -0.61
ARHGEF28-210ENST00000510312 FBXW7Q969H0 707 aa11.21□□□□□ -0.62
ARHGEF28-210ENST00000510312 GOLGA6L3A6NEY3 463 aa11.21□□□□□ -0.62
ARHGEF28-210ENST00000510312 TOMM22Q9NS69 142 aa11.2□□□□□ -0.62
ARHGEF28-210ENST00000510312 NGEFQ8N5V2 710 aa11.2□□□□□ -0.62
ARHGEF28-210ENST00000510312 CARMIL1Q5VZK9 1371 aa11.2□□□□□ -0.62
ARHGEF28-210ENST00000510312 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
ARHGEF28-210ENST00000510312 RAD21O60216 631 aa11.19□□□□□ -0.62
ARHGEF28-210ENST00000510312 ROCK2O75116 1388 aaKnown RBP11.19□□□□□ -0.62
ARHGEF28-210ENST00000510312 SPAG9O60271 1321 aaKnown RBP11.19□□□□□ -0.62
ARHGEF28-210ENST00000510312 CCDC146Q8IYE0 955 aa11.18□□□□□ -0.62
ARHGEF28-210ENST00000510312 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
ARHGEF28-210ENST00000510312 NOC3LQ8WTT2 800 aaKnown RBP11.18□□□□□ -0.62
ARHGEF28-210ENST00000510312 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
ARHGEF28-210ENST00000510312 CEP164Q9UPV0 1460 aa11.18□□□□□ -0.62
ARHGEF28-210ENST00000510312 CYB5RLQ6IPT4 315 aa11.18□□□□□ -0.62
ARHGEF28-210ENST00000510312 SYAP1Q96A49 352 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF28-210ENST00000510312 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
ARHGEF28-210ENST00000510312 MARCH6O60337 910 aa11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 STK31Q9BXU1 1019 aa11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 HSPA5P11021 654 aaKnown RBP11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 SYTL4Q96C24 671 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 A0A0U1RQG5 324 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 WWC1Q8IX03 1113 aa11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 RASSF8Q8NHQ8 419 aa11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 CARMIL2Q6F5E8 1435 aa11.17□□□□□ -0.62
ARHGEF28-210ENST00000510312 PKNOX2Q96KN3 472 aa11.16□□□□□ -0.62
ARHGEF28-210ENST00000510312 KRI1Q8N9T8 703 aaKnown RBP11.16□□□□□ -0.62
ARHGEF28-210ENST00000510312 EFCAB2Q5VUJ9 269 aa11.15□□□□□ -0.62
ARHGEF28-210ENST00000510312 GPATCH3Q96I76 525 aa11.15□□□□□ -0.62
ARHGEF28-210ENST00000510312 IPO8O15397 1037 aaKnown RBP11.15□□□□□ -0.62
ARHGEF28-210ENST00000510312 TRAK1Q9UPV9 953 aa11.14□□□□□ -0.63
ARHGEF28-210ENST00000510312 KTN1Q86UP2 1357 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms