RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 MLECQ14165 292 aa29.9■■■□□ 2.38
CLDND1-217ENST00000508071 HSPA2P54652 639 aa29.89■■■□□ 2.38
CLDND1-217ENST00000508071 FER1L4A9Z1Z3 1794 aa29.89■■■□□ 2.38
CLDND1-217ENST00000508071 FMN1Q68DA7 1419 aa29.88■■■□□ 2.37
CLDND1-217ENST00000508071 UBTFP17480 764 aaKnown RBP29.88■■■□□ 2.37
CLDND1-217ENST00000508071 MYO5CQ9NQX4 1742 aa29.87■■■□□ 2.37
CLDND1-217ENST00000508071 EHMT2Q96KQ7 1210 aa29.86■■■□□ 2.37
CLDND1-217ENST00000508071 EFCAB2Q5VUJ9 269 aa29.85■■■□□ 2.37
CLDND1-217ENST00000508071 CDK11AQ9UQ88 783 aaPredicted RBP29.85■■■□□ 2.37
CLDND1-217ENST00000508071 ATP10AO60312 1499 aa29.82■■■□□ 2.36
CLDND1-217ENST00000508071 C9orf84Q5VXU9 1444 aa29.8■■■□□ 2.36
CLDND1-217ENST00000508071 ARHGAP35Q9NRY4 1499 aa29.79■■■□□ 2.36
CLDND1-217ENST00000508071 KIF14Q15058 1648 aa29.78■■■□□ 2.36
CLDND1-217ENST00000508071 ARHGEF12Q9NZN5 1544 aa29.76■■■□□ 2.36
CLDND1-217ENST00000508071 ZNF518AQ6AHZ1 1483 aa29.74■■■□□ 2.35
CLDND1-217ENST00000508071 TROQ12816 1431 aaPredicted RBP29.73■■■□□ 2.35
CLDND1-217ENST00000508071 ARHGAP5Q13017 1502 aa29.73■■■□□ 2.35
CLDND1-217ENST00000508071 CLIP1P30622 1438 aa29.71■■■□□ 2.35
CLDND1-217ENST00000508071 PREX1Q8TCU6 1659 aa29.7■■■□□ 2.35
CLDND1-217ENST00000508071 MYT1LQ9UL68 1186 aa29.68■■■□□ 2.34
CLDND1-217ENST00000508071 AFAP1Q8N556 730 aa29.67■■■□□ 2.34
CLDND1-217ENST00000508071 CERKQ8TCT0 537 aa29.67■■■□□ 2.34
CLDND1-217ENST00000508071 KDM5CP41229 1560 aa29.67■■■□□ 2.34
CLDND1-217ENST00000508071 LRRIQ1Q96JM4 1722 aa29.65■■■□□ 2.34
CLDND1-217ENST00000508071 CEBPAP49715 358 aaPredicted RBP29.65■■■□□ 2.34
CLDND1-217ENST00000508071 CDC42BPBQ9Y5S2 1711 aa29.61■■■□□ 2.33
CLDND1-217ENST00000508071 DIP2CQ9Y2E4 1556 aa29.6■■■□□ 2.33
CLDND1-217ENST00000508071 SETD1BQ9UPS6 1966 aaKnown RBP29.59■■■□□ 2.33
CLDND1-217ENST00000508071 REREQ9P2R6 1566 aa29.57■■■□□ 2.32
CLDND1-217ENST00000508071 UHRF1BP1Q6BDS2 1440 aa29.56■■■□□ 2.32
CLDND1-217ENST00000508071 CHIC1Q5VXU3 224 aa29.55■■■□□ 2.32
CLDND1-217ENST00000508071 PREX2Q70Z35 1606 aa29.55■■■□□ 2.32
CLDND1-217ENST00000508071 ABCA6Q8N139 1617 aa29.55■■■□□ 2.32
CLDND1-217ENST00000508071 MLH3Q9UHC1 1453 aa29.55■■■□□ 2.32
CLDND1-217ENST00000508071 DMRT2Q9Y5R5 561 aa29.54■■■□□ 2.32
CLDND1-217ENST00000508071 CCDC18Q5T9S5 1454 aa29.54■■■□□ 2.32
CLDND1-217ENST00000508071 STRCQ7RTU9 1775 aa29.52■■■□□ 2.32
CLDND1-217ENST00000508071 ABCC1P33527 1531 aa29.51■■■□□ 2.32
CLDND1-217ENST00000508071 CASKIN1Q8WXD9 1431 aa29.51■■■□□ 2.31
CLDND1-217ENST00000508071 ESF1Q9H501 851 aaKnown RBP29.5■■■□□ 2.31
CLDND1-217ENST00000508071 ITSN2Q9NZM3 1697 aa29.5■■■□□ 2.31
CLDND1-217ENST00000508071 TRAPPC8Q9Y2L5 1435 aa29.49■■■□□ 2.31
CLDND1-217ENST00000508071 C3P01024 1663 aa29.48■■■□□ 2.31
CLDND1-217ENST00000508071 AGLP35573 1532 aa29.48■■■□□ 2.31
CLDND1-217ENST00000508071 CDC42BPAQ5VT25 1732 aa29.44■■■□□ 2.3
CLDND1-217ENST00000508071 KIDINS220Q9ULH0 1771 aa29.42■■■□□ 2.3
CLDND1-217ENST00000508071 CNTLNQ9NXG0 1405 aa29.37■■■□□ 2.29
CLDND1-217ENST00000508071 FYCO1Q9BQS8 1478 aa29.37■■■□□ 2.29
CLDND1-217ENST00000508071 PTPRTO14522 1441 aa29.37■■■□□ 2.29
CLDND1-217ENST00000508071 ZNF777Q9ULD5 760 aaPredicted RBP29.36■■■□□ 2.29
CLDND1-217ENST00000508071 SAMD9LQ8IVG5 1584 aa29.34■■■□□ 2.29
CLDND1-217ENST00000508071 SYCP2Q9BX26 1530 aa29.3■■■□□ 2.28
CLDND1-217ENST00000508071 SPAG9O60271 1321 aaKnown RBP29.29■■■□□ 2.28
CLDND1-217ENST00000508071 MROH2AA6NES4 1674 aa29.28■■■□□ 2.28
CLDND1-217ENST00000508071 GPATCH8Q9UKJ3 1502 aaKnown RBP29.28■■■□□ 2.28
CLDND1-217ENST00000508071 SUPT6HQ7KZ85 1726 aaKnown RBP29.26■■■□□ 2.27
CLDND1-217ENST00000508071 NCOA1Q15788 1441 aa29.26■■■□□ 2.27
CLDND1-217ENST00000508071 HNRNPMP52272 730 aaKnown RBP eCLIP29.25■■■□□ 2.27
CLDND1-217ENST00000508071 NPATQ14207 1427 aa29.25■■■□□ 2.27
CLDND1-217ENST00000508071 DISP3Q9P2K9 1392 aa29.23■■■□□ 2.27
CLDND1-217ENST00000508071 ZMYM3Q14202 1370 aa29.22■■■□□ 2.27
CLDND1-217ENST00000508071 PLEKHH2Q8IVE3 1493 aa29.22■■■□□ 2.27
CLDND1-217ENST00000508071 ATP7AQ04656 1500 aa29.21■■■□□ 2.27
CLDND1-217ENST00000508071 CFDP1Q9UEE9 299 aaPredicted RBP29.21■■■□□ 2.27
CLDND1-217ENST00000508071 KIAA1107Q9UPP5 1409 aa29.2■■■□□ 2.27
CLDND1-217ENST00000508071 CAMSAP1Q5T5Y3 1602 aa29.2■■■□□ 2.27
CLDND1-217ENST00000508071 LTBP4Q8N2S1 1624 aa29.2■■■□□ 2.27
CLDND1-217ENST00000508071 CCNB3Q8WWL7 1395 aa29.18■■■□□ 2.26
CLDND1-217ENST00000508071 INO80Q9ULG1 1556 aaPredicted RBP29.18■■■□□ 2.26
CLDND1-217ENST00000508071 CLTCQ00610 1675 aaKnown RBP29.17■■■□□ 2.26
CLDND1-217ENST00000508071 IQSEC2Q5JU85 1478 aa29.17■■■□□ 2.26
CLDND1-217ENST00000508071 A2MP01023 1474 aa29.16■■■□□ 2.26
CLDND1-217ENST00000508071 PLXNC1O60486 1568 aa29.15■■■□□ 2.26
CLDND1-217ENST00000508071 MTUS2Q5JR59 1369 aa29.13■■■□□ 2.25
CLDND1-217ENST00000508071 GGT6Q6P531 493 aa29.11■■■□□ 2.25
CLDND1-217ENST00000508071 MYO3AQ8NEV4 1616 aa29.1■■■□□ 2.25
CLDND1-217ENST00000508071 NCKAP5LQ9HCH0 1330 aa29.1■■■□□ 2.25
CLDND1-217ENST00000508071 ZNF142P52746 1687 aaPredicted RBP29.09■■■□□ 2.25
CLDND1-217ENST00000508071 ILDR2Q71H61 639 aa29.09■■■□□ 2.25
CLDND1-217ENST00000508071 ADGBQ8N7X0 1667 aa29.09■■■□□ 2.25
CLDND1-217ENST00000508071 PTPRKQ15262 1439 aa29.07■■■□□ 2.24
CLDND1-217ENST00000508071 SPATA31D1Q6ZQQ2 1576 aa29.06■■■□□ 2.24
CLDND1-217ENST00000508071 CEP170BQ9Y4F5 1589 aaPredicted RBP29.05■■■□□ 2.24
CLDND1-217ENST00000508071 PKD2Q13563 968 aa29.05■■■□□ 2.24
CLDND1-217ENST00000508071 PPP6R1Q9UPN7 881 aa29.05■■■□□ 2.24
CLDND1-217ENST00000508071 PLA2R1Q13018 1463 aa29.04■■■□□ 2.24
CLDND1-217ENST00000508071 ZNF335Q9H4Z2 1342 aaPredicted RBP29.02■■■□□ 2.24
CLDND1-217ENST00000508071 TIAM1Q13009 1591 aa29.02■■■□□ 2.24
CLDND1-217ENST00000508071 ZNF644Q9H582 1327 aaPredicted RBP29.01■■■□□ 2.23
CLDND1-217ENST00000508071 SOCS7O14512 581 aa29.01■■■□□ 2.23
CLDND1-217ENST00000508071 EHBP1L1Q8N3D4 1523 aa28.99■■■□□ 2.23
CLDND1-217ENST00000508071 TCOF1Q13428 1488 aaKnown RBP28.98■■■□□ 2.23
CLDND1-217ENST00000508071 MBD5Q9P267 1494 aa28.97■■■□□ 2.23
CLDND1-217ENST00000508071 RTEL1-TNFRSF6BF6WH68 1400 aa28.96■■■□□ 2.23
CLDND1-217ENST00000508071 UBAP1LF5GYI3 381 aa28.95■■■□□ 2.22
CLDND1-217ENST00000508071 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
CLDND1-217ENST00000508071 DHX29Q7Z478 1369 aaKnown RBP28.93■■■□□ 2.22
CLDND1-217ENST00000508071 A2ML1A8K2U0 1454 aa28.92■■■□□ 2.22
CLDND1-217ENST00000508071 DNMT1P26358 1616 aaKnown RBP28.9■■■□□ 2.22
CLDND1-217ENST00000508071 CCDC141Q6ZP82 1450 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms