RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
SNCAIP-209ENST00000508017 ERICH6BQ5W0A0 696 aa18.48■□□□□ 0.55
SNCAIP-209ENST00000508017 EPRSP07814 1512 aaKnown RBP18.48■□□□□ 0.55
SNCAIP-209ENST00000508017 B4GALNT3Q6L9W6 998 aa18.47■□□□□ 0.55
SNCAIP-209ENST00000508017 ZBED9Q6R2W3 1325 aa18.44■□□□□ 0.54
SNCAIP-209ENST00000508017 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
SNCAIP-209ENST00000508017 MIA2Q96PC5 1412 aa18.43■□□□□ 0.54
SNCAIP-209ENST00000508017 TEX14Q8IWB6 1497 aa18.43■□□□□ 0.54
SNCAIP-209ENST00000508017 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
SNCAIP-209ENST00000508017 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
SNCAIP-209ENST00000508017 KIF7Q2M1P5 1343 aa18.42■□□□□ 0.54
SNCAIP-209ENST00000508017 POLR1AO95602 1720 aaPredicted RBP18.41■□□□□ 0.54
SNCAIP-209ENST00000508017 WDR62O43379 1518 aa18.4■□□□□ 0.54
SNCAIP-209ENST00000508017 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.54
SNCAIP-209ENST00000508017 IQGAP2Q13576 1575 aa18.39■□□□□ 0.53
SNCAIP-209ENST00000508017 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
SNCAIP-209ENST00000508017 DAPK1P53355 1430 aa18.38■□□□□ 0.53
SNCAIP-209ENST00000508017 PBRM1Q86U86 1689 aa18.37■□□□□ 0.53
SNCAIP-209ENST00000508017 ZNF644Q9H582 1327 aaPredicted RBP18.36■□□□□ 0.53
SNCAIP-209ENST00000508017 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
SNCAIP-209ENST00000508017 ABCC5O15440 1437 aa18.35■□□□□ 0.53
SNCAIP-209ENST00000508017 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
SNCAIP-209ENST00000508017 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
SNCAIP-209ENST00000508017 ROCK1Q13464 1354 aa18.34■□□□□ 0.53
SNCAIP-209ENST00000508017 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
SNCAIP-209ENST00000508017 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
SNCAIP-209ENST00000508017 DHX29Q7Z478 1369 aaKnown RBP18.3■□□□□ 0.52
SNCAIP-209ENST00000508017 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
SNCAIP-209ENST00000508017 BCORL1Q5H9F3 1711 aa18.3■□□□□ 0.52
SNCAIP-209ENST00000508017 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
SNCAIP-209ENST00000508017 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-209ENST00000508017 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
SNCAIP-209ENST00000508017 PZPP20742 1482 aa18.27■□□□□ 0.52
SNCAIP-209ENST00000508017 MBD5Q9P267 1494 aa18.25■□□□□ 0.51
SNCAIP-209ENST00000508017 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-209ENST00000508017 USP47Q96K76 1375 aa18.23■□□□□ 0.51
SNCAIP-209ENST00000508017 NUDCQ9Y266 331 aa18.23■□□□□ 0.51
SNCAIP-209ENST00000508017 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
SNCAIP-209ENST00000508017 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
SNCAIP-209ENST00000508017 RNF123Q5XPI4 1314 aa18.2■□□□□ 0.5
SNCAIP-209ENST00000508017 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
SNCAIP-209ENST00000508017 KIAA0556O60303 1618 aa18.2■□□□□ 0.5
SNCAIP-209ENST00000508017 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
SNCAIP-209ENST00000508017 KDM5CP41229 1560 aa18.19■□□□□ 0.5
SNCAIP-209ENST00000508017 KIF14Q15058 1648 aa18.19■□□□□ 0.5
SNCAIP-209ENST00000508017 CAMSAP2Q08AD1 1489 aa18.18■□□□□ 0.5
SNCAIP-209ENST00000508017 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
SNCAIP-209ENST00000508017 RAPGEF6Q8TEU7 1601 aa18.18■□□□□ 0.5
SNCAIP-209ENST00000508017 DEKP35659 375 aaKnown RBP18.18■□□□□ 0.5
SNCAIP-209ENST00000508017 ADGBQ8N7X0 1667 aa18.17■□□□□ 0.5
SNCAIP-209ENST00000508017 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
SNCAIP-209ENST00000508017 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
SNCAIP-209ENST00000508017 NBR1Q14596 966 aa18.15■□□□□ 0.5
SNCAIP-209ENST00000508017 PKD2Q13563 968 aa18.15■□□□□ 0.5
SNCAIP-209ENST00000508017 PNISRQ8TF01 805 aaKnown RBP18.15■□□□□ 0.5
SNCAIP-209ENST00000508017 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
SNCAIP-209ENST00000508017 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-209ENST00000508017 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-209ENST00000508017 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
SNCAIP-209ENST00000508017 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
SNCAIP-209ENST00000508017 TMC1Q8TDI8 760 aa18.11■□□□□ 0.49
SNCAIP-209ENST00000508017 KIAA0586Q9BVV6 1533 aa18.11■□□□□ 0.49
SNCAIP-209ENST00000508017 ITSN2Q9NZM3 1697 aa18.11■□□□□ 0.49
SNCAIP-209ENST00000508017 TROQ12816 1431 aaPredicted RBP18.1■□□□□ 0.49
SNCAIP-209ENST00000508017 GPATCH8Q9UKJ3 1502 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-209ENST00000508017 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
SNCAIP-209ENST00000508017 ARID4BQ4LE39 1312 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-209ENST00000508017 RALGAPBQ86X10 1494 aa18.08■□□□□ 0.49
SNCAIP-209ENST00000508017 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
SNCAIP-209ENST00000508017 IPO9Q96P70 1041 aaKnown RBP18.07■□□□□ 0.48
SNCAIP-209ENST00000508017 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
SNCAIP-209ENST00000508017 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
SNCAIP-209ENST00000508017 ROCK2O75116 1388 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-209ENST00000508017 LRPPRCP42704 1394 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-209ENST00000508017 PLB1Q6P1J6 1458 aa18.05■□□□□ 0.48
SNCAIP-209ENST00000508017 MRC2Q9UBG0 1479 aa18.05■□□□□ 0.48
SNCAIP-209ENST00000508017 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
SNCAIP-209ENST00000508017 KIF15Q9NS87 1388 aa18.05■□□□□ 0.48
SNCAIP-209ENST00000508017 ANKRD50Q9ULJ7 1429 aa18.05■□□□□ 0.48
SNCAIP-209ENST00000508017 ST20-MTHFSA0A0A6YYL1 179 aa18.03■□□□□ 0.48
SNCAIP-209ENST00000508017 KDM2AQ9Y2K7 1162 aa18.03■□□□□ 0.48
SNCAIP-209ENST00000508017 ADCY10Q96PN6 1610 aa18.03■□□□□ 0.48
SNCAIP-209ENST00000508017 GRIN2AQ12879 1464 aa18.02■□□□□ 0.48
SNCAIP-209ENST00000508017 NUP155O75694 1391 aa18.01■□□□□ 0.47
SNCAIP-209ENST00000508017 E9PCH4 1651 aa18.01■□□□□ 0.47
SNCAIP-209ENST00000508017 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
SNCAIP-209ENST00000508017 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
SNCAIP-209ENST00000508017 RRP1P56182 461 aaKnown RBP18■□□□□ 0.47
SNCAIP-209ENST00000508017 EXOC6Q8TAG9 804 aa18■□□□□ 0.47
SNCAIP-209ENST00000508017 SALL2Q9Y467 1007 aaPredicted RBP18■□□□□ 0.47
SNCAIP-209ENST00000508017 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
SNCAIP-209ENST00000508017 CDC42BPAQ5VT25 1732 aa17.99■□□□□ 0.47
SNCAIP-209ENST00000508017 ARHGEF12Q9NZN5 1544 aa17.99■□□□□ 0.47
SNCAIP-209ENST00000508017 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
SNCAIP-209ENST00000508017 DCAF11Q8TEB1 546 aa17.97■□□□□ 0.47
SNCAIP-209ENST00000508017 C9orf84Q5VXU9 1444 aa17.96■□□□□ 0.47
SNCAIP-209ENST00000508017 RALBP1Q15311 655 aa17.96■□□□□ 0.47
SNCAIP-209ENST00000508017 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
SNCAIP-209ENST00000508017 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-209ENST00000508017 RCAN3Q9UKA8 241 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms