RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 FBXO22Q8NEZ5 403 aa9.14□□□□□ -0.95
HMGB3P15-201ENST00000507326 MFRPQ9BY79 579 aa9.13□□□□□ -0.95
HMGB3P15-201ENST00000507326 HOXB1P14653 301 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P15-201ENST00000507326 RIMBP2O15034 1052 aa9.09□□□□□ -0.95
HMGB3P15-201ENST00000507326 SPNS2Q8IVW8 549 aa9.08□□□□□ -0.96
HMGB3P15-201ENST00000507326 ERBB3P21860 1342 aa9.06□□□□□ -0.96
HMGB3P15-201ENST00000507326 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
HMGB3P15-201ENST00000507326 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
HMGB3P15-201ENST00000507326 MMRN1Q13201 1228 aa9.05□□□□□ -0.96
HMGB3P15-201ENST00000507326 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
HMGB3P15-201ENST00000507326 GPR153Q6NV75 609 aa9.02□□□□□ -0.97
HMGB3P15-201ENST00000507326 VARS2Q5ST30 1063 aaKnown RBP9.01□□□□□ -0.97
HMGB3P15-201ENST00000507326 C2orf72A6NCS6 295 aa9□□□□□ -0.97
HMGB3P15-201ENST00000507326 ARSIQ5FYB1 569 aa9□□□□□ -0.97
HMGB3P15-201ENST00000507326 PPP1R37O75864 691 aa8.99□□□□□ -0.97
HMGB3P15-201ENST00000507326 KHSRPQ92945 711 aaKnown RBP eCLIP8.98□□□□□ -0.97
HMGB3P15-201ENST00000507326 KIF3CO14782 793 aa8.97□□□□□ -0.97
HMGB3P15-201ENST00000507326 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
HMGB3P15-201ENST00000507326 TMC2Q8TDI7 906 aa8.95□□□□□ -0.98
HMGB3P15-201ENST00000507326 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
HMGB3P15-201ENST00000507326 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
HMGB3P15-201ENST00000507326 ZNF316A6NFI3 1004 aaPredicted RBP8.91□□□□□ -0.98
HMGB3P15-201ENST00000507326 NUDT7P0C024 238 aa8.89□□□□□ -0.99
HMGB3P15-201ENST00000507326 PCDHGA4Q9Y5G9 962 aa8.88□□□□□ -0.99
HMGB3P15-201ENST00000507326 SLC34A2O95436 690 aa8.87□□□□□ -0.99
HMGB3P15-201ENST00000507326 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
HMGB3P15-201ENST00000507326 LHX6Q9UPM6 363 aa8.84□□□□□ -0.99
HMGB3P15-201ENST00000507326 ANKRD13DQ6ZTN6 518 aa8.82□□□□□ -1
HMGB3P15-201ENST00000507326 PLPP6Q8IY26 295 aa8.82□□□□□ -1
HMGB3P15-201ENST00000507326 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
HMGB3P15-201ENST00000507326 FOXK1P85037 733 aa8.81□□□□□ -1
HMGB3P15-201ENST00000507326 DNAJC5Q9H3Z4 198 aa8.81□□□□□ -1
HMGB3P15-201ENST00000507326 GPHNQ9NQX3 736 aaPredicted RBP8.81□□□□□ -1
HMGB3P15-201ENST00000507326 MYT1LQ9UL68 1186 aa8.81□□□□□ -1
HMGB3P15-201ENST00000507326 DSG2Q14126 1118 aa8.8□□□□□ -1
HMGB3P15-201ENST00000507326 LSM11P83369 360 aaKnown RBP eCLIP8.79□□□□□ -1
HMGB3P15-201ENST00000507326 PTCD2Q8WV60 388 aaKnown RBP8.78□□□□□ -1
HMGB3P15-201ENST00000507326 RYDENQ9NUL5 291 aaKnown RBP8.78□□□□□ -1
HMGB3P15-201ENST00000507326 AXIN2Q9Y2T1 843 aa8.78□□□□□ -1
HMGB3P15-201ENST00000507326 POTEEQ6S8J3 1075 aa8.77□□□□□ -1.01
HMGB3P15-201ENST00000507326 DCAF8L2P0C7V8 631 aa8.76□□□□□ -1.01
HMGB3P15-201ENST00000507326 PBX2P40425 430 aa8.76□□□□□ -1.01
HMGB3P15-201ENST00000507326 PTGER2P43116 358 aa8.75□□□□□ -1.01
HMGB3P15-201ENST00000507326 KDM4FA0A1W2PPD8 638 aa8.74□□□□□ -1.01
HMGB3P15-201ENST00000507326 PSDA5PKW4 1024 aaPredicted RBP8.72□□□□□ -1.01
HMGB3P15-201ENST00000507326 TBC1D12O60347 775 aa8.72□□□□□ -1.01
HMGB3P15-201ENST00000507326 UPF1Q92900 1129 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB3P15-201ENST00000507326 CRISPLD2Q9H0B8 497 aa8.72□□□□□ -1.01
HMGB3P15-201ENST00000507326 GTPBP6O43824 516 aaPredicted RBP8.71□□□□□ -1.02
HMGB3P15-201ENST00000507326 ARHGAP33O14559 1287 aa8.69□□□□□ -1.02
HMGB3P15-201ENST00000507326 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
HMGB3P15-201ENST00000507326 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
HMGB3P15-201ENST00000507326 OXER1Q8TDS5 423 aa8.68□□□□□ -1.02
HMGB3P15-201ENST00000507326 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
HMGB3P15-201ENST00000507326 PDE4AP27815 886 aa8.67□□□□□ -1.02
HMGB3P15-201ENST00000507326 PSEN2P49810 448 aa8.67□□□□□ -1.02
HMGB3P15-201ENST00000507326 DMRTA1Q5VZB9 504 aa8.66□□□□□ -1.02
HMGB3P15-201ENST00000507326 ADGRD1Q6QNK2 874 aa8.66□□□□□ -1.02
HMGB3P15-201ENST00000507326 LARP6Q9BRS8 491 aaKnown RBP8.65□□□□□ -1.02
HMGB3P15-201ENST00000507326 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
HMGB3P15-201ENST00000507326 KCNK17Q96T54 332 aa8.62□□□□□ -1.03
HMGB3P15-201ENST00000507326 TK2O00142 265 aa8.61□□□□□ -1.03
HMGB3P15-201ENST00000507326 DDX27Q96GQ7 796 aaKnown RBP8.61□□□□□ -1.03
HMGB3P15-201ENST00000507326 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
HMGB3P15-201ENST00000507326 HRO43593 1189 aa8.58□□□□□ -1.04
HMGB3P15-201ENST00000507326 MFSD10Q14728 455 aa8.58□□□□□ -1.04
HMGB3P15-201ENST00000507326 CADPS2Q86UW7 1296 aa8.58□□□□□ -1.04
HMGB3P15-201ENST00000507326 EVI5O60447 810 aa8.57□□□□□ -1.04
HMGB3P15-201ENST00000507326 FOSBP53539 338 aa8.57□□□□□ -1.04
HMGB3P15-201ENST00000507326 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
HMGB3P15-201ENST00000507326 STAC3Q96MF2 364 aa8.56□□□□□ -1.04
HMGB3P15-201ENST00000507326 BCL2L12Q9HB09 334 aa8.55□□□□□ -1.04
HMGB3P15-201ENST00000507326 ANO8Q9HCE9 1232 aaPredicted RBP8.55□□□□□ -1.04
HMGB3P15-201ENST00000507326 JPH4Q96JJ6 628 aa8.54□□□□□ -1.04
HMGB3P15-201ENST00000507326 EMILIN3Q9NT22 766 aa8.54□□□□□ -1.04
HMGB3P15-201ENST00000507326 HCSTQ9UBK5 93 aa8.54□□□□□ -1.04
HMGB3P15-201ENST00000507326 VPS9D1Q9Y2B5 631 aa8.54□□□□□ -1.04
HMGB3P15-201ENST00000507326 KCTD12Q96CX2 325 aaKnown RBP8.53□□□□□ -1.04
HMGB3P15-201ENST00000507326 PTPREP23469 700 aa8.52□□□□□ -1.05
HMGB3P15-201ENST00000507326 ZDHHC16Q969W1 377 aa8.51□□□□□ -1.05
HMGB3P15-201ENST00000507326 ADAM33Q9BZ11 813 aa8.51□□□□□ -1.05
HMGB3P15-201ENST00000507326 BBXQ8WY36 941 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P15-201ENST00000507326 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
HMGB3P15-201ENST00000507326 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
HMGB3P15-201ENST00000507326 ZBED2Q9BTP6 218 aa8.48□□□□□ -1.05
HMGB3P15-201ENST00000507326 PCDHGA10Q9Y5H3 936 aa8.46□□□□□ -1.06
HMGB3P15-201ENST00000507326 PTPN5P54829 565 aa8.45□□□□□ -1.06
HMGB3P15-201ENST00000507326 BHMG1C9JSJ3 638 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P15-201ENST00000507326 DPYSL4O14531 572 aa8.44□□□□□ -1.06
HMGB3P15-201ENST00000507326 CAMK2BQ13554 666 aa8.44□□□□□ -1.06
HMGB3P15-201ENST00000507326 GOLGA8CPA6NN73 597 aa8.43□□□□□ -1.06
HMGB3P15-201ENST00000507326 TYW1BQ6NUM6 668 aa8.43□□□□□ -1.06
HMGB3P15-201ENST00000507326 PPP1R3GB7ZBB8 358 aa8.42□□□□□ -1.06
HMGB3P15-201ENST00000507326 PHF14O94880 888 aa8.42□□□□□ -1.06
HMGB3P15-201ENST00000507326 AMER1Q5JTC6 1135 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P15-201ENST00000507326 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
HMGB3P15-201ENST00000507326 COL9A1P20849 921 aa8.41□□□□□ -1.06
HMGB3P15-201ENST00000507326 PROX2Q3B8N5 592 aa8.41□□□□□ -1.06
HMGB3P15-201ENST00000507326 SPRYD3Q8NCJ5 442 aa8.41□□□□□ -1.06
HMGB3P15-201ENST00000507326 NBPF3Q9H094 633 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms