RNA–Protein interactions for RNA: ENST00000507184.5

IFT172-216, Transcript of intraflagellar transport 172, human

TSL 5

Gene IFT172, Length 5,565 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT172-216	ENST00000507184	FOXD4L1	Q9NU39	408 aa		14	□□□□□ -0.17
IFT172-216	ENST00000507184	PATL2	C9JE40	543 aa	Known RBP	14	□□□□□ -0.17
IFT172-216	ENST00000507184	MFAP1	P55081	439 aa	Known RBP	13.99	□□□□□ -0.17
IFT172-216	ENST00000507184	HTATSF1	O43719	755 aa	Known RBP	13.99	□□□□□ -0.17
IFT172-216	ENST00000507184	SIN3A	Q96ST3	1273 aa		13.98	□□□□□ -0.17
IFT172-216	ENST00000507184	KIAA1211	Q6ZU35	1233 aa		13.98	□□□□□ -0.17
IFT172-216	ENST00000507184	HSP90B1	P14625	803 aa	Known RBP	13.98	□□□□□ -0.17
IFT172-216	ENST00000507184	RB1CC1	Q8TDY2	1594 aa		13.98	□□□□□ -0.17
IFT172-216	ENST00000507184	USP35	Q9P2H5	1018 aa		13.97	□□□□□ -0.17
IFT172-216	ENST00000507184	NPM1	P06748	294 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
IFT172-216	ENST00000507184	ISY1	Q9ULR0	285 aa	Known RBP	13.95	□□□□□ -0.18
IFT172-216	ENST00000507184	CCER2	I3L3R5	266 aa		13.95	□□□□□ -0.18
IFT172-216	ENST00000507184	NPHP1	O15259	732 aa		13.95	□□□□□ -0.18
IFT172-216	ENST00000507184	GSE1	Q14687	1217 aa		13.95	□□□□□ -0.18
IFT172-216	ENST00000507184	PRM3	Q9NNZ6	103 aa		13.94	□□□□□ -0.18
IFT172-216	ENST00000507184	CLIP1	P30622	1438 aa		13.94	□□□□□ -0.18
IFT172-216	ENST00000507184	HAP1	P54257	671 aa	Predicted RBP	13.94	□□□□□ -0.18
IFT172-216	ENST00000507184	CREBRF	Q8IUR6	639 aa		13.93	□□□□□ -0.18
IFT172-216	ENST00000507184	TPM3	P06753	285 aa		13.93	□□□□□ -0.18
IFT172-216	ENST00000507184	FAM13B	Q9NYF5	915 aa		13.93	□□□□□ -0.18
IFT172-216	ENST00000507184	RWDD1	Q9H446	243 aa	Predicted RBP	13.93	□□□□□ -0.18
IFT172-216	ENST00000507184	CCAR2	Q8N163	923 aa	Known RBP	13.93	□□□□□ -0.18
IFT172-216	ENST00000507184	NOL8	Q76FK4	1167 aa	Known RBP	13.92	□□□□□ -0.18
IFT172-216	ENST00000507184	RCAN3	Q9UKA8	241 aa		13.92	□□□□□ -0.18
IFT172-216	ENST00000507184	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.91	□□□□□ -0.18
IFT172-216	ENST00000507184	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.91	□□□□□ -0.18
IFT172-216	ENST00000507184	PHF14	O94880	888 aa		13.91	□□□□□ -0.18
IFT172-216	ENST00000507184	CSPP1	Q1MSJ5	1256 aa		13.91	□□□□□ -0.18
IFT172-216	ENST00000507184	ITPRIP	Q8IWB1	547 aa		13.9	□□□□□ -0.18
IFT172-216	ENST00000507184	DDX11L8	A8MPP1	907 aa		13.9	□□□□□ -0.18
IFT172-216	ENST00000507184	GPS2	Q13227	327 aa		13.88	□□□□□ -0.19
IFT172-216	ENST00000507184	ZNF592	Q92610	1267 aa		13.88	□□□□□ -0.19
IFT172-216	ENST00000507184	MYO15B	Q96JP2	1530 aa		13.88	□□□□□ -0.19
IFT172-216	ENST00000507184	SLC4A3	P48751	1232 aa		13.88	□□□□□ -0.19
IFT172-216	ENST00000507184	PKNOX2	Q96KN3	472 aa		13.87	□□□□□ -0.19
IFT172-216	ENST00000507184	APP	P05067	770 aa		13.86	□□□□□ -0.19
IFT172-216	ENST00000507184	IPO8	O15397	1037 aa	Known RBP	13.86	□□□□□ -0.19
IFT172-216	ENST00000507184	TEX35	Q5T0J7	233 aa		13.85	□□□□□ -0.19
IFT172-216	ENST00000507184	PMFBP1	Q8TBY8	1022 aa		13.85	□□□□□ -0.19
IFT172-216	ENST00000507184	POGK	Q9P215	609 aa		13.85	□□□□□ -0.19
IFT172-216	ENST00000507184	LMOD2	Q6P5Q4	547 aa		13.85	□□□□□ -0.19
IFT172-216	ENST00000507184	CCDC34	Q96HJ3	373 aa		13.84	□□□□□ -0.19
IFT172-216	ENST00000507184	DDX49	Q9Y6V7	483 aa	Known RBP	13.84	□□□□□ -0.19
IFT172-216	ENST00000507184	TMF1	P82094	1093 aa		13.83	□□□□□ -0.2
IFT172-216	ENST00000507184	TAF7L	Q5H9L4	462 aa		13.83	□□□□□ -0.2
IFT172-216	ENST00000507184	RASSF8	Q8NHQ8	419 aa		13.83	□□□□□ -0.2
IFT172-216	ENST00000507184	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.83	□□□□□ -0.2
IFT172-216	ENST00000507184	CEP89	Q96ST8	783 aa		13.82	□□□□□ -0.2
IFT172-216	ENST00000507184	TRIM6-TRIM34	B2RNG4	842 aa		13.82	□□□□□ -0.2
IFT172-216	ENST00000507184	MORC1	Q86VD1	984 aa		13.82	□□□□□ -0.2
IFT172-216	ENST00000507184	CEP162	Q5TB80	1403 aa		13.81	□□□□□ -0.2
IFT172-216	ENST00000507184	PES1	O00541	588 aa	Known RBP	13.8	□□□□□ -0.2
IFT172-216	ENST00000507184	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.8	□□□□□ -0.2
IFT172-216	ENST00000507184	RSF1	Q96T23	1441 aa	Predicted RBP	13.8	□□□□□ -0.2
IFT172-216	ENST00000507184	NOM1	Q5C9Z4	860 aa	Known RBP	13.8	□□□□□ -0.2
IFT172-216	ENST00000507184	GOLGA6L19	H0YKK7	550 aa		13.8	□□□□□ -0.2
IFT172-216	ENST00000507184	ST18	O60284	1047 aa		13.79	□□□□□ -0.2
IFT172-216	ENST00000507184	HSPA5	P11021	654 aa	Known RBP	13.79	□□□□□ -0.2
IFT172-216	ENST00000507184	CCDC70	Q6NSX1	233 aa		13.79	□□□□□ -0.2
IFT172-216	ENST00000507184	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.79	□□□□□ -0.2
IFT172-216	ENST00000507184	SOX12	O15370	315 aa		13.78	□□□□□ -0.2
IFT172-216	ENST00000507184	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.78	□□□□□ -0.2
IFT172-216	ENST00000507184	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.78	□□□□□ -0.2
IFT172-216	ENST00000507184	PODXL2	Q9NZ53	605 aa		13.78	□□□□□ -0.2
IFT172-216	ENST00000507184	RRP12	Q5JTH9	1297 aa	Known RBP	13.78	□□□□□ -0.2
IFT172-216	ENST00000507184	KCNH8	Q96L42	1107 aa		13.78	□□□□□ -0.2
IFT172-216	ENST00000507184	KTN1	Q86UP2	1357 aa	Known RBP	13.78	□□□□□ -0.2
IFT172-216	ENST00000507184	SF3A1	Q15459	793 aa	Known RBP	13.77	□□□□□ -0.2
IFT172-216	ENST00000507184	FAM43A	Q8N2R8	423 aa		13.77	□□□□□ -0.2
IFT172-216	ENST00000507184	RTF1	Q92541	710 aa	Known RBP	13.77	□□□□□ -0.21
IFT172-216	ENST00000507184	KIF16B	Q96L93	1317 aa		13.77	□□□□□ -0.21
IFT172-216	ENST00000507184	TPD52L1	Q16890	204 aa	Predicted RBP	13.77	□□□□□ -0.21
IFT172-216	ENST00000507184	BECN2	A8MW95	431 aa		13.77	□□□□□ -0.21
IFT172-216	ENST00000507184	FBXO3	Q9UK99	471 aa		13.76	□□□□□ -0.21
IFT172-216	ENST00000507184	TSR1	Q2NL82	804 aa	Known RBP	13.76	□□□□□ -0.21
IFT172-216	ENST00000507184	PDE4A	P27815	886 aa		13.76	□□□□□ -0.21
IFT172-216	ENST00000507184	DCAF11	Q8TEB1	546 aa		13.75	□□□□□ -0.21
IFT172-216	ENST00000507184	CLUAP1	Q96AJ1	413 aa		13.74	□□□□□ -0.21
IFT172-216	ENST00000507184	GPATCH3	Q96I76	525 aa		13.73	□□□□□ -0.21
IFT172-216	ENST00000507184	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.73	□□□□□ -0.21
IFT172-216	ENST00000507184	SMC4	Q9NTJ3	1288 aa		13.73	□□□□□ -0.21
IFT172-216	ENST00000507184	HOMER1	Q86YM7	354 aa		13.72	□□□□□ -0.21
IFT172-216	ENST00000507184	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.72	□□□□□ -0.21
IFT172-216	ENST00000507184		H3BQV1	296 aa		13.72	□□□□□ -0.21
IFT172-216	ENST00000507184	TPM1	P09493	284 aa		13.72	□□□□□ -0.21
IFT172-216	ENST00000507184	FAM161A	Q3B820	660 aa		13.72	□□□□□ -0.21
IFT172-216	ENST00000507184	IFFO2	Q5TF58	517 aa		13.72	□□□□□ -0.21
IFT172-216	ENST00000507184	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.72	□□□□□ -0.21
IFT172-216	ENST00000507184	GOLGA3	Q08378	1498 aa		13.72	□□□□□ -0.21
IFT172-216	ENST00000507184	PLEKHD1	A6NEE1	506 aa		13.71	□□□□□ -0.22
IFT172-216	ENST00000507184	GORAB	Q5T7V8	394 aa		13.7	□□□□□ -0.22
IFT172-216	ENST00000507184	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.7	□□□□□ -0.22
IFT172-216	ENST00000507184	SRPK2	P78362	688 aa	Known RBP	13.7	□□□□□ -0.22
IFT172-216	ENST00000507184	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
IFT172-216	ENST00000507184	FANCI	Q9NVI1	1328 aa		13.7	□□□□□ -0.22
IFT172-216	ENST00000507184	MAP7D2	Q96T17	732 aa		13.7	□□□□□ -0.22
IFT172-216	ENST00000507184	HMMR	O75330	724 aa		13.69	□□□□□ -0.22
IFT172-216	ENST00000507184	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.69	□□□□□ -0.22
IFT172-216	ENST00000507184	KIF3A	Q9Y496	699 aa		13.68	□□□□□ -0.22
IFT172-216	ENST00000507184	AK7	Q96M32	723 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms