RNA–Protein interactions for RNA: ENST00000504881.1

SRFBP1-202, Transcript of serum response factor binding protein 1, humanhuman

TSL 3

Gene SRFBP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-202ENST00000504881 HOXB1P14653 301 aaPredicted RBP12.55□□□□□ -0.4
SRFBP1-202ENST00000504881 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
SRFBP1-202ENST00000504881 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
SRFBP1-202ENST00000504881 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
SRFBP1-202ENST00000504881 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
SRFBP1-202ENST00000504881 KIF3CO14782 793 aa12.49□□□□□ -0.41
SRFBP1-202ENST00000504881 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
SRFBP1-202ENST00000504881 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
SRFBP1-202ENST00000504881 PPP1R37O75864 691 aa12.46□□□□□ -0.41
SRFBP1-202ENST00000504881 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.41
SRFBP1-202ENST00000504881 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
SRFBP1-202ENST00000504881 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
SRFBP1-202ENST00000504881 ERBB3P21860 1342 aa12.41□□□□□ -0.42
SRFBP1-202ENST00000504881 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
SRFBP1-202ENST00000504881 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
SRFBP1-202ENST00000504881 KRTAP3-3Q9BYR6 98 aa12.4□□□□□ -0.42
SRFBP1-202ENST00000504881 KRTAP3-2Q9BYR7 98 aa12.4□□□□□ -0.42
SRFBP1-202ENST00000504881 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
SRFBP1-202ENST00000504881 SPNS2Q8IVW8 549 aa12.38□□□□□ -0.43
SRFBP1-202ENST00000504881 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
SRFBP1-202ENST00000504881 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
SRFBP1-202ENST00000504881 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
SRFBP1-202ENST00000504881 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
SRFBP1-202ENST00000504881 SLC34A2O95436 690 aa12.34□□□□□ -0.43
SRFBP1-202ENST00000504881 MMRN1Q13201 1228 aa12.31□□□□□ -0.44
SRFBP1-202ENST00000504881 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.44
SRFBP1-202ENST00000504881 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
SRFBP1-202ENST00000504881 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
SRFBP1-202ENST00000504881 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
SRFBP1-202ENST00000504881 FOXK1P85037 733 aa12.27□□□□□ -0.45
SRFBP1-202ENST00000504881 PCDHGA4Q9Y5G9 962 aa12.27□□□□□ -0.45
SRFBP1-202ENST00000504881 NUDT7P0C024 238 aa12.24□□□□□ -0.45
SRFBP1-202ENST00000504881 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
SRFBP1-202ENST00000504881 PLPP6Q8IY26 295 aa12.22□□□□□ -0.45
SRFBP1-202ENST00000504881 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.45
SRFBP1-202ENST00000504881 DSG2Q14126 1118 aa12.21□□□□□ -0.45
SRFBP1-202ENST00000504881 PTCD2Q8WV60 388 aaKnown RBP12.21□□□□□ -0.45
SRFBP1-202ENST00000504881 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
SRFBP1-202ENST00000504881 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
SRFBP1-202ENST00000504881 KDM4FA0A1W2PPD8 638 aa12.16□□□□□ -0.46
SRFBP1-202ENST00000504881 PBX2P40425 430 aa12.13□□□□□ -0.47
SRFBP1-202ENST00000504881 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
SRFBP1-202ENST00000504881 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
SRFBP1-202ENST00000504881 TBC1D12O60347 775 aa12.11□□□□□ -0.47
SRFBP1-202ENST00000504881 PDE4AP27815 886 aa12.1□□□□□ -0.47
SRFBP1-202ENST00000504881 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
SRFBP1-202ENST00000504881 LSM11P83369 360 aaKnown RBP eCLIP12.09□□□□□ -0.47
SRFBP1-202ENST00000504881 PTGER2P43116 358 aa12.08□□□□□ -0.48
SRFBP1-202ENST00000504881 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
SRFBP1-202ENST00000504881 POTEEQ6S8J3 1075 aa12.05□□□□□ -0.48
SRFBP1-202ENST00000504881 ANKRD13DQ6ZTN6 518 aa12.05□□□□□ -0.48
SRFBP1-202ENST00000504881 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
SRFBP1-202ENST00000504881 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
SRFBP1-202ENST00000504881 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.495e-6■■■□□ 15.1
SRFBP1-202ENST00000504881 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
SRFBP1-202ENST00000504881 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
SRFBP1-202ENST00000504881 AXIN2Q9Y2T1 843 aa12.02□□□□□ -0.49
SRFBP1-202ENST00000504881 MFSD10Q14728 455 aa12.01□□□□□ -0.49
SRFBP1-202ENST00000504881 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
SRFBP1-202ENST00000504881 ARHGAP33O14559 1287 aa12□□□□□ -0.49
SRFBP1-202ENST00000504881 BBXQ8WY36 941 aaPredicted RBP12□□□□□ -0.49
SRFBP1-202ENST00000504881 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
SRFBP1-202ENST00000504881 ADGRD1Q6QNK2 874 aa11.92□□□□□ -0.5
SRFBP1-202ENST00000504881 ANO8Q9HCE9 1232 aaPredicted RBP11.92□□□□□ -0.5
SRFBP1-202ENST00000504881 TK2O00142 265 aa11.91□□□□□ -0.5
SRFBP1-202ENST00000504881 PSEN2P49810 448 aa11.91□□□□□ -0.5
SRFBP1-202ENST00000504881 EVI5O60447 810 aa11.9□□□□□ -0.5
SRFBP1-202ENST00000504881 FOSBP53539 338 aa11.9□□□□□ -0.5
SRFBP1-202ENST00000504881 ZNF454Q8N9F8 522 aa11.9□□□□□ -0.5
SRFBP1-202ENST00000504881 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
SRFBP1-202ENST00000504881 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
SRFBP1-202ENST00000504881 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
SRFBP1-202ENST00000504881 JPH4Q96JJ6 628 aa11.88□□□□□ -0.51
SRFBP1-202ENST00000504881 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
SRFBP1-202ENST00000504881 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
SRFBP1-202ENST00000504881 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
SRFBP1-202ENST00000504881 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
SRFBP1-202ENST00000504881 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
SRFBP1-202ENST00000504881 HRO43593 1189 aa11.84□□□□□ -0.51
SRFBP1-202ENST00000504881 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
SRFBP1-202ENST00000504881 ZDHHC16Q969W1 377 aa11.81□□□□□ -0.52
SRFBP1-202ENST00000504881 PTPREP23469 700 aa11.8□□□□□ -0.52
SRFBP1-202ENST00000504881 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
SRFBP1-202ENST00000504881 VPS9D1Q9Y2B5 631 aa11.78□□□□□ -0.52
SRFBP1-202ENST00000504881 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
SRFBP1-202ENST00000504881 HCSTQ9UBK5 93 aa11.75□□□□□ -0.53
SRFBP1-202ENST00000504881 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
SRFBP1-202ENST00000504881 PAXIP1Q6ZW49 1069 aaPredicted RBP11.74□□□□□ -0.53
SRFBP1-202ENST00000504881 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
SRFBP1-202ENST00000504881 DPYSL4O14531 572 aa11.73□□□□□ -0.53
SRFBP1-202ENST00000504881 FBXW7Q969H0 707 aa11.73□□□□□ -0.53
SRFBP1-202ENST00000504881 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
SRFBP1-202ENST00000504881 ZBED2Q9BTP6 218 aa11.73□□□□□ -0.53
SRFBP1-202ENST00000504881 PHF14O94880 888 aa11.72□□□□□ -0.53
SRFBP1-202ENST00000504881 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
SRFBP1-202ENST00000504881 PPP1R3GB7ZBB8 358 aa11.68□□□□□ -0.54
SRFBP1-202ENST00000504881 BHMG1C9JSJ3 638 aaPredicted RBP11.68□□□□□ -0.54
SRFBP1-202ENST00000504881 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
SRFBP1-202ENST00000504881 EPAS1Q99814 870 aa11.67□□□□□ -0.54
SRFBP1-202ENST00000504881 PDIA6Q15084 440 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms