RNA–Protein interactions for RNA: ENST00000504524.5

PLXND1-204, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-204ENST00000504524 HFM1A2PYH4 1435 aa27.41■■□□□ 1.98
PLXND1-204ENST00000504524 DAPK1P53355 1430 aa27.4■■□□□ 1.98
PLXND1-204ENST00000504524 ZNF644Q9H582 1327 aaPredicted RBP27.39■■□□□ 1.98
PLXND1-204ENST00000504524 AKNAQ7Z591 1439 aa27.39■■□□□ 1.97
PLXND1-204ENST00000504524 CFDP1Q9UEE9 299 aaPredicted RBP27.38■■□□□ 1.97
PLXND1-204ENST00000504524 ABCC5O15440 1437 aa27.37■■□□□ 1.97
PLXND1-204ENST00000504524 ADGBQ8N7X0 1667 aa27.37■■□□□ 1.97
PLXND1-204ENST00000504524 SAMD9LQ8IVG5 1584 aa27.36■■□□□ 1.97
PLXND1-204ENST00000504524 NAIPQ13075 1403 aa27.35■■□□□ 1.97
PLXND1-204ENST00000504524 RIMBP3CA6NJZ7 1639 aa27.33■■□□□ 1.97
PLXND1-204ENST00000504524 RIMBP3BA6NNM3 1639 aa27.33■■□□□ 1.97
PLXND1-204ENST00000504524 RIMBP3Q9UFD9 1639 aa27.33■■□□□ 1.97
PLXND1-204ENST00000504524 WDR7Q9Y4E6 1490 aa27.32■■□□□ 1.96
PLXND1-204ENST00000504524 ARHGEF5Q12774 1597 aa27.3■■□□□ 1.96
PLXND1-204ENST00000504524 ROCK1Q13464 1354 aa27.27■■□□□ 1.96
PLXND1-204ENST00000504524 KDM6BO15054 1643 aa27.26■■□□□ 1.95
PLXND1-204ENST00000504524 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.95
PLXND1-204ENST00000504524 ABCA9Q8IUA7 1624 aa27.26■■□□□ 1.95
PLXND1-204ENST00000504524 CLSPNQ9HAW4 1339 aa27.25■■□□□ 1.95
PLXND1-204ENST00000504524 MAPKBP1O60336 1514 aa27.24■■□□□ 1.95
PLXND1-204ENST00000504524 ZNF777Q9ULD5 760 aaPredicted RBP27.24■■□□□ 1.95
PLXND1-204ENST00000504524 ADGRL2O95490 1459 aa27.24■■□□□ 1.95
PLXND1-204ENST00000504524 ASXL2Q76L83 1435 aa27.23■■□□□ 1.95
PLXND1-204ENST00000504524 SHANK2Q9UPX8 1470 aa27.23■■□□□ 1.95
PLXND1-204ENST00000504524 CHIC2Q9UKJ5 165 aa27.22■■□□□ 1.95
PLXND1-204ENST00000504524 ARAP3Q8WWN8 1544 aa27.22■■□□□ 1.95
PLXND1-204ENST00000504524 MBD5Q9P267 1494 aa27.21■■□□□ 1.95
PLXND1-204ENST00000504524 KCNH8Q96L42 1107 aa27.21■■□□□ 1.95
PLXND1-204ENST00000504524 PLCH2O75038 1416 aa27.21■■□□□ 1.95
PLXND1-204ENST00000504524 RRP7BPQ9NSQ0 103 aa27.19■■□□□ 1.94
PLXND1-204ENST00000504524 SYCP2Q9BX26 1530 aa27.18■■□□□ 1.94
PLXND1-204ENST00000504524 CCDC141Q6ZP82 1450 aa27.14■■□□□ 1.94
PLXND1-204ENST00000504524 MAST1Q9Y2H9 1570 aa27.13■■□□□ 1.93
PLXND1-204ENST00000504524 ABCC1P33527 1531 aa27.13■■□□□ 1.93
PLXND1-204ENST00000504524 PLEKHH2Q8IVE3 1493 aa27.13■■□□□ 1.93
PLXND1-204ENST00000504524 NCOA1Q15788 1441 aa27.13■■□□□ 1.93
PLXND1-204ENST00000504524 C9orf84Q5VXU9 1444 aa27.11■■□□□ 1.93
PLXND1-204ENST00000504524 KIAA1107Q9UPP5 1409 aa27.11■■□□□ 1.93
PLXND1-204ENST00000504524 ARHGEF12Q9NZN5 1544 aa27.09■■□□□ 1.93
PLXND1-204ENST00000504524 NPM1P06748 294 aaKnown RBP eCLIP27.08■■□□□ 1.93
PLXND1-204ENST00000504524 HNRNPMP52272 730 aaKnown RBP eCLIP27.07■■□□□ 1.92
PLXND1-204ENST00000504524 ANKRD30AQ9BXX3 1397 aa27.05■■□□□ 1.92
PLXND1-204ENST00000504524 PLXNC1O60486 1568 aa27.02■■□□□ 1.92
PLXND1-204ENST00000504524 RSPH4AQ5TD94 716 aa27.02■■□□□ 1.92
PLXND1-204ENST00000504524 EFCAB2Q5VUJ9 269 aa27.02■■□□□ 1.92
PLXND1-204ENST00000504524 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
PLXND1-204ENST00000504524 FANCAO15360 1455 aa26.99■■□□□ 1.91
PLXND1-204ENST00000504524 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
PLXND1-204ENST00000504524 CFAP74Q9C0B2 1584 aa26.96■■□□□ 1.91
PLXND1-204ENST00000504524 TSPY4P0CV99 314 aa26.96■■□□□ 1.91
PLXND1-204ENST00000504524 TSPY10P0CW01 314 aa26.96■■□□□ 1.91
PLXND1-204ENST00000504524 ANKRD50Q9ULJ7 1429 aa26.94■■□□□ 1.9
PLXND1-204ENST00000504524 TRAPPC8Q9Y2L5 1435 aa26.94■■□□□ 1.9
PLXND1-204ENST00000504524 ACIN1Q9UKV3 1341 aaKnown RBP26.93■■□□□ 1.9
PLXND1-204ENST00000504524 KIF15Q9NS87 1388 aa26.93■■□□□ 1.9
PLXND1-204ENST00000504524 MAP3K4Q9Y6R4 1608 aa26.93■■□□□ 1.9
PLXND1-204ENST00000504524 GLI2P10070 1586 aa26.9■■□□□ 1.9
PLXND1-204ENST00000504524 PZPP20742 1482 aa26.89■■□□□ 1.89
PLXND1-204ENST00000504524 INO80Q9ULG1 1556 aaPredicted RBP26.88■■□□□ 1.89
PLXND1-204ENST00000504524 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
PLXND1-204ENST00000504524 ADGRL1O94910 1474 aa26.88■■□□□ 1.89
PLXND1-204ENST00000504524 CD109Q6YHK3 1445 aa26.88■■□□□ 1.89
PLXND1-204ENST00000504524 KDM5DQ9BY66 1539 aa26.88■■□□□ 1.89
PLXND1-204ENST00000504524 TRIM52Q96A61 297 aa26.87■■□□□ 1.89
PLXND1-204ENST00000504524 DIP2BQ9P265 1576 aa26.85■■□□□ 1.89
PLXND1-204ENST00000504524 UNC13BO14795 1591 aa26.84■■□□□ 1.89
PLXND1-204ENST00000504524 DUOX2Q9NRD8 1548 aa26.83■■□□□ 1.89
PLXND1-204ENST00000504524 SIN3AQ96ST3 1273 aa26.82■■□□□ 1.88
PLXND1-204ENST00000504524 MPHOSPH9Q99550 1183 aa26.82■■□□□ 1.88
PLXND1-204ENST00000504524 RTEL1-TNFRSF6BF6WH68 1400 aa26.82■■□□□ 1.88
PLXND1-204ENST00000504524 SCAPERQ9BY12 1400 aa26.81■■□□□ 1.88
PLXND1-204ENST00000504524 ATP7AQ04656 1500 aa26.8■■□□□ 1.88
PLXND1-204ENST00000504524 NEO1Q92859 1461 aa26.76■■□□□ 1.88
PLXND1-204ENST00000504524 KIDINS220Q9ULH0 1771 aa26.76■■□□□ 1.88
PLXND1-204ENST00000504524 KDM5CP41229 1560 aa26.76■■□□□ 1.87
PLXND1-204ENST00000504524 ERBINQ96RT1 1412 aa26.75■■□□□ 1.87
PLXND1-204ENST00000504524 AFAP1Q8N556 730 aa26.74■■□□□ 1.87
PLXND1-204ENST00000504524 PPRC1Q5VV67 1664 aaKnown RBP26.74■■□□□ 1.87
PLXND1-204ENST00000504524 SPAG9O60271 1321 aaKnown RBP26.74■■□□□ 1.87
PLXND1-204ENST00000504524 KIF13AQ9H1H9 1805 aa26.73■■□□□ 1.87
PLXND1-204ENST00000504524 MAGI2Q86UL8 1455 aa26.73■■□□□ 1.87
PLXND1-204ENST00000504524 ZNF518AQ6AHZ1 1483 aa26.72■■□□□ 1.87
PLXND1-204ENST00000504524 IQGAP3Q86VI3 1631 aa26.72■■□□□ 1.87
PLXND1-204ENST00000504524 NEUROD1Q13562 356 aa26.71■■□□□ 1.87
PLXND1-204ENST00000504524 POGZQ7Z3K3 1410 aa26.71■■□□□ 1.87
PLXND1-204ENST00000504524 TIMELESSQ9UNS1 1208 aa26.7■■□□□ 1.86
PLXND1-204ENST00000504524 ANKRD30BQ9BXX2 1392 aa26.7■■□□□ 1.86
PLXND1-204ENST00000504524 RICTORQ6R327 1708 aa26.69■■□□□ 1.86
PLXND1-204ENST00000504524 SLC4A1APQ9BWU0 796 aaKnown RBP26.69■■□□□ 1.86
PLXND1-204ENST00000504524 FAM135AQ9P2D6 1515 aa26.68■■□□□ 1.86
PLXND1-204ENST00000504524 NUP155O75694 1391 aa26.68■■□□□ 1.86
PLXND1-204ENST00000504524 DEPDC5O75140 1603 aa26.68■■□□□ 1.86
PLXND1-204ENST00000504524 TSPOAP1O95153 1857 aa26.67■■□□□ 1.86
PLXND1-204ENST00000504524 HECW2Q9P2P5 1572 aa26.67■■□□□ 1.86
PLXND1-204ENST00000504524 EIF2AK4Q9P2K8 1649 aaKnown RBP26.67■■□□□ 1.86
PLXND1-204ENST00000504524 FOXD1Q16676 465 aa26.66■■□□□ 1.86
PLXND1-204ENST00000504524 RPRD2Q5VT52 1461 aaKnown RBP26.62■■□□□ 1.85
PLXND1-204ENST00000504524 MLH3Q9UHC1 1453 aa26.61■■□□□ 1.85
PLXND1-204ENST00000504524 TONSLQ96HA7 1378 aa26.61■■□□□ 1.85
PLXND1-204ENST00000504524 FRMPD1Q5SYB0 1578 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms