RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 XIRP1Q702N8 1843 aaKnown RBP6.78□□□□□ -1.32
NDFIP1-202ENST00000503388 EHMT2Q96KQ7 1210 aa6.78□□□□□ -1.32
NDFIP1-202ENST00000503388 ABCC10Q5T3U5 1492 aa6.78□□□□□ -1.32
NDFIP1-202ENST00000503388 KNDC1Q76NI1 1749 aa6.76□□□□□ -1.33
NDFIP1-202ENST00000503388 ARHGEF12Q9NZN5 1544 aa6.76□□□□□ -1.33
NDFIP1-202ENST00000503388 UNC13BO14795 1591 aa6.76□□□□□ -1.33
NDFIP1-202ENST00000503388 CRYBG1Q9Y4K1 1723 aa6.75□□□□□ -1.33
NDFIP1-202ENST00000503388 ATP1B4Q9UN42 357 aaPredicted RBP6.75□□□□□ -1.33
NDFIP1-202ENST00000503388 GAPVD1Q14C86 1478 aa6.74□□□□□ -1.33
NDFIP1-202ENST00000503388 CEP152O94986 1710 aa6.74□□□□□ -1.33
NDFIP1-202ENST00000503388 NWD1Q149M9 1564 aa6.74□□□□□ -1.33
NDFIP1-202ENST00000503388 CDK11AQ9UQ88 783 aaPredicted RBP6.73□□□□□ -1.33
NDFIP1-202ENST00000503388 STRCQ7RTU9 1775 aa6.73□□□□□ -1.33
NDFIP1-202ENST00000503388 ALKQ9UM73 1620 aa6.73□□□□□ -1.33
NDFIP1-202ENST00000503388 KIDINS220Q9ULH0 1771 aa6.73□□□□□ -1.33
NDFIP1-202ENST00000503388 LMTK2Q8IWU2 1503 aa6.73□□□□□ -1.33
NDFIP1-202ENST00000503388 GOLGA3Q08378 1498 aa6.73□□□□□ -1.33
NDFIP1-202ENST00000503388 DNAJC5Q9H3Z4 198 aa6.72□□□□□ -1.33
NDFIP1-202ENST00000503388 YTHDC1Q96MU7 727 aaKnown RBP6.72□□□□□ -1.33
NDFIP1-202ENST00000503388 NCOA2Q15596 1464 aa6.71□□□□□ -1.34
NDFIP1-202ENST00000503388 ZNF518AQ6AHZ1 1483 aa6.71□□□□□ -1.34
NDFIP1-202ENST00000503388 SYNMO15061 1565 aa6.71□□□□□ -1.34
NDFIP1-202ENST00000503388 PLB1Q6P1J6 1458 aa6.71□□□□□ -1.34
NDFIP1-202ENST00000503388 LOC105371045A0A1W2PR82 267 aa6.71□□□□□ -1.34
NDFIP1-202ENST00000503388 TNIKQ9UKE5 1360 aa6.69□□□□□ -1.34
NDFIP1-202ENST00000503388 COL17A1Q9UMD9 1497 aaPredicted RBP6.68□□□□□ -1.34
NDFIP1-202ENST00000503388 DIEXFQ68CQ4 756 aaKnown RBP6.68□□□□□ -1.34
NDFIP1-202ENST00000503388 UGGT1Q9NYU2 1555 aa6.68□□□□□ -1.34
NDFIP1-202ENST00000503388 EFCAB6Q5THR3 1501 aa6.68□□□□□ -1.34
NDFIP1-202ENST00000503388 ABCC1P33527 1531 aa6.67□□□□□ -1.34
NDFIP1-202ENST00000503388 ZNF316A6NFI3 1004 aaPredicted RBP6.67□□□□□ -1.34
NDFIP1-202ENST00000503388 NEO1Q92859 1461 aa6.66□□□□□ -1.34
NDFIP1-202ENST00000503388 C3P01024 1663 aa6.66□□□□□ -1.34
NDFIP1-202ENST00000503388 PHLDB1Q86UU1 1377 aa6.66□□□□□ -1.34
NDFIP1-202ENST00000503388 WRNQ14191 1432 aaPredicted RBP eCLIP6.66□□□□□ -1.34
NDFIP1-202ENST00000503388 RAD54L2Q9Y4B4 1467 aa6.65□□□□□ -1.34
NDFIP1-202ENST00000503388 KIF27Q86VH2 1401 aa6.65□□□□□ -1.35
NDFIP1-202ENST00000503388 WNK3Q9BYP7 1800 aa6.64□□□□□ -1.35
NDFIP1-202ENST00000503388 PRDM15P57071 1507 aaPredicted RBP6.64□□□□□ -1.35
NDFIP1-202ENST00000503388 TIMELESSQ9UNS1 1208 aa6.64□□□□□ -1.35
NDFIP1-202ENST00000503388 RANGAP1P46060 587 aaPredicted RBP6.64□□□□□ -1.35
NDFIP1-202ENST00000503388 DIP2CQ9Y2E4 1556 aa6.63□□□□□ -1.35
NDFIP1-202ENST00000503388 RGPD3A6NKT7 1758 aaPredicted RBP6.63□□□□□ -1.35
NDFIP1-202ENST00000503388 RGPD4Q7Z3J3 1758 aa6.63□□□□□ -1.35
NDFIP1-202ENST00000503388 TCOF1Q13428 1488 aaKnown RBP6.63□□□□□ -1.35
NDFIP1-202ENST00000503388 HNRNPUL2Q1KMD3 747 aaKnown RBP6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 TTBK1Q5TCY1 1321 aaPredicted RBP6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 CLIP1P30622 1438 aa6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 TET3O43151 1660 aa6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 ANP32CO43423 234 aa6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 PABPN1Q86U42 306 aaKnown RBP eCLIP6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 KIAA1210Q9ULL0 1709 aa6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 MYT1LQ9UL68 1186 aa6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 SPHKAPQ2M3C7 1700 aa6.62□□□□□ -1.35
NDFIP1-202ENST00000503388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.61□□□□□ -1.35
NDFIP1-202ENST00000503388 PHF23Q9BUL5 403 aaPredicted RBP6.61□□□□□ -1.35
NDFIP1-202ENST00000503388 SUPT6HQ7KZ85 1726 aaKnown RBP6.61□□□□□ -1.35
NDFIP1-202ENST00000503388 CICQ96RK0 1608 aaPredicted RBP6.61□□□□□ -1.35
NDFIP1-202ENST00000503388 SHANK2Q9UPX8 1470 aa6.61□□□□□ -1.35
NDFIP1-202ENST00000503388 MARF1Q9Y4F3 1742 aaKnown RBP6.61□□□□□ -1.35
NDFIP1-202ENST00000503388 IQGAP1P46940 1657 aa6.6□□□□□ -1.35
NDFIP1-202ENST00000503388 DAXXQ9UER7 740 aaPredicted RBP6.6□□□□□ -1.35
NDFIP1-202ENST00000503388 CEP170BQ9Y4F5 1589 aaPredicted RBP6.6□□□□□ -1.35
NDFIP1-202ENST00000503388 MYO3AQ8NEV4 1616 aa6.6□□□□□ -1.35
NDFIP1-202ENST00000503388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.6□□□□□ -1.35
NDFIP1-202ENST00000503388 ANKRD26Q9UPS8 1709 aa6.59□□□□□ -1.35
NDFIP1-202ENST00000503388 FAM50AQ14320 339 aaKnown RBP6.58□□□□□ -1.36
NDFIP1-202ENST00000503388 TIAM1Q13009 1591 aa6.58□□□□□ -1.36
NDFIP1-202ENST00000503388 COL22A1Q8NFW1 1626 aaPredicted RBP6.58□□□□□ -1.36
NDFIP1-202ENST00000503388 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.58□□□□□ -1.36
NDFIP1-202ENST00000503388 CEP162Q5TB80 1403 aa6.58□□□□□ -1.36
NDFIP1-202ENST00000503388 SLC24A1O60721 1099 aa6.58□□□□□ -1.36
NDFIP1-202ENST00000503388 FHOD3Q2V2M9 1422 aa6.57□□□□□ -1.36
NDFIP1-202ENST00000503388 SAMD9LQ8IVG5 1584 aa6.57□□□□□ -1.36
NDFIP1-202ENST00000503388 DNMT1P26358 1616 aaKnown RBP6.57□□□□□ -1.36
NDFIP1-202ENST00000503388 FYCO1Q9BQS8 1478 aa6.57□□□□□ -1.36
NDFIP1-202ENST00000503388 QSER1Q2KHR3 1735 aa6.57□□□□□ -1.36
NDFIP1-202ENST00000503388 UBR1Q8IWV7 1749 aa6.57□□□□□ -1.36
NDFIP1-202ENST00000503388 RAPGEF2Q9Y4G8 1499 aa6.56□□□□□ -1.36
NDFIP1-202ENST00000503388 DUOX2Q9NRD8 1548 aa6.56□□□□□ -1.36
NDFIP1-202ENST00000503388 SPATA31D1Q6ZQQ2 1576 aa6.56□□□□□ -1.36
NDFIP1-202ENST00000503388 ZFYVE16Q7Z3T8 1539 aa6.56□□□□□ -1.36
NDFIP1-202ENST00000503388 PHRF1Q9P1Y6 1649 aaKnown RBP6.55□□□□□ -1.36
NDFIP1-202ENST00000503388 TONSLQ96HA7 1378 aa6.55□□□□□ -1.36
NDFIP1-202ENST00000503388 ABCA3Q99758 1704 aa6.54□□□□□ -1.36
NDFIP1-202ENST00000503388 ADGRL2O95490 1459 aa6.54□□□□□ -1.36
NDFIP1-202ENST00000503388 TRIM52Q96A61 297 aa6.54□□□□□ -1.36
NDFIP1-202ENST00000503388 XRN1Q8IZH2 1706 aaKnown RBP6.53□□□□□ -1.36
NDFIP1-202ENST00000503388 QRICH2Q9H0J4 1663 aa6.53□□□□□ -1.36
NDFIP1-202ENST00000503388 DIP2AQ14689 1571 aa6.53□□□□□ -1.36
NDFIP1-202ENST00000503388 SOGA1O94964 1423 aa6.53□□□□□ -1.36
NDFIP1-202ENST00000503388 STRCP1A6NGW2 1772 aa6.53□□□□□ -1.36
NDFIP1-202ENST00000503388 IGF1RP08069 1367 aa6.53□□□□□ -1.36
NDFIP1-202ENST00000503388 ITGAEP38570 1179 aa6.53□□□□□ -1.36
NDFIP1-202ENST00000503388 TOPAZ1Q8N9V7 1692 aa6.53□□□□□ -1.36
NDFIP1-202ENST00000503388 LRRC7Q96NW7 1537 aa6.52□□□□□ -1.37
NDFIP1-202ENST00000503388 CCDC18Q5T9S5 1454 aa6.52□□□□□ -1.37
NDFIP1-202ENST00000503388 MTUS2Q5JR59 1369 aa6.52□□□□□ -1.37
NDFIP1-202ENST00000503388 NUP153P49790 1475 aaKnown RBP6.52□□□□□ -1.37
NDFIP1-202ENST00000503388 NRXN3Q9Y4C0 1643 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms