RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 NUP160Q12769 1436 aa23.43■■□□□ 1.34
VCAN-204ENST00000502527 FBLN2P98095 1184 aa23.43■■□□□ 1.34
VCAN-204ENST00000502527 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
VCAN-204ENST00000502527 PRG4Q92954 1404 aaPredicted RBP23.4■■□□□ 1.34
VCAN-204ENST00000502527 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
VCAN-204ENST00000502527 ANP32CO43423 234 aa23.39■■□□□ 1.34
VCAN-204ENST00000502527 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
VCAN-204ENST00000502527 ZNF644Q9H582 1327 aaPredicted RBP23.39■■□□□ 1.34
VCAN-204ENST00000502527 CCER2I3L3R5 266 aa23.39■■□□□ 1.33
VCAN-204ENST00000502527 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
VCAN-204ENST00000502527 ITSN2Q9NZM3 1697 aa23.33■■□□□ 1.33
VCAN-204ENST00000502527 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.33
VCAN-204ENST00000502527 CAMSAP2Q08AD1 1489 aa23.32■■□□□ 1.32
VCAN-204ENST00000502527 GPATCH8Q9UKJ3 1502 aaKnown RBP23.32■■□□□ 1.32
VCAN-204ENST00000502527 ANKRD30BQ9BXX2 1392 aa23.3■■□□□ 1.32
VCAN-204ENST00000502527 SUPT16HQ9Y5B9 1047 aaKnown RBP23.28■■□□□ 1.32
VCAN-204ENST00000502527 L3MBTL2Q969R5 705 aa23.28■■□□□ 1.32
VCAN-204ENST00000502527 FOXD1Q16676 465 aa23.27■■□□□ 1.32
VCAN-204ENST00000502527 KIF14Q15058 1648 aa23.27■■□□□ 1.32
VCAN-204ENST00000502527 RPRD2Q5VT52 1461 aaKnown RBP23.26■■□□□ 1.31
VCAN-204ENST00000502527 HSPA5P11021 654 aaKnown RBP23.26■■□□□ 1.31
VCAN-204ENST00000502527 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
VCAN-204ENST00000502527 NCOA1Q15788 1441 aa23.26■■□□□ 1.31
VCAN-204ENST00000502527 EIF4G2P78344 907 aaKnown RBP eCLIP23.25■■□□□ 1.31
VCAN-204ENST00000502527 ABCA8O94911 1581 aa23.25■■□□□ 1.31
VCAN-204ENST00000502527 PLEKHD1A6NEE1 506 aa23.24■■□□□ 1.31
VCAN-204ENST00000502527 ADGRL2O95490 1459 aa23.24■■□□□ 1.31
VCAN-204ENST00000502527 ADGBQ8N7X0 1667 aa23.22■■□□□ 1.31
VCAN-204ENST00000502527 ZNF777Q9ULD5 760 aaPredicted RBP23.22■■□□□ 1.31
VCAN-204ENST00000502527 ANKRD30AQ9BXX3 1397 aa23.2■■□□□ 1.3
VCAN-204ENST00000502527 ATP10BO94823 1461 aa23.2■■□□□ 1.3
VCAN-204ENST00000502527 WASHC2AQ641Q2 1341 aa23.18■■□□□ 1.3
VCAN-204ENST00000502527 PZPP20742 1482 aa23.18■■□□□ 1.3
VCAN-204ENST00000502527 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
VCAN-204ENST00000502527 CROCC2H7BZ55 1655 aa23.18■■□□□ 1.3
VCAN-204ENST00000502527 ABCC10Q5T3U5 1492 aa23.16■■□□□ 1.3
VCAN-204ENST00000502527 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
VCAN-204ENST00000502527 PTPRGP23470 1445 aa23.12■■□□□ 1.29
VCAN-204ENST00000502527 KIAA1107Q9UPP5 1409 aa23.11■■□□□ 1.29
VCAN-204ENST00000502527 NBPF8Q3BBV2 869 aa23.11■■□□□ 1.29
VCAN-204ENST00000502527 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
VCAN-204ENST00000502527 ANKRD50Q9ULJ7 1429 aa23.1■■□□□ 1.29
VCAN-204ENST00000502527 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
VCAN-204ENST00000502527 CNTLNQ9NXG0 1405 aa23.07■■□□□ 1.28
VCAN-204ENST00000502527 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
VCAN-204ENST00000502527 TSPY4P0CV99 314 aa23.05■■□□□ 1.28
VCAN-204ENST00000502527 TSPY10P0CW01 314 aa23.05■■□□□ 1.28
VCAN-204ENST00000502527 PKD2Q13563 968 aa23.05■■□□□ 1.28
VCAN-204ENST00000502527 SPATA31E1Q6ZUB1 1445 aa23.03■■□□□ 1.28
VCAN-204ENST00000502527 ARHGEF5Q12774 1597 aa23.01■■□□□ 1.27
VCAN-204ENST00000502527 C11orf95C9JLR9 678 aaPredicted RBP23.01■■□□□ 1.27
VCAN-204ENST00000502527 MBD5Q9P267 1494 aa23■■□□□ 1.27
VCAN-204ENST00000502527 NUP155O75694 1391 aa23■■□□□ 1.27
VCAN-204ENST00000502527 KDM5DQ9BY66 1539 aa22.97■■□□□ 1.27
VCAN-204ENST00000502527 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
VCAN-204ENST00000502527 NEFLP07196 543 aa22.96■■□□□ 1.27
VCAN-204ENST00000502527 FKBP8Q14318 412 aa22.96■■□□□ 1.27
VCAN-204ENST00000502527 KIF15Q9NS87 1388 aa22.96■■□□□ 1.27
VCAN-204ENST00000502527 RSPH4AQ5TD94 716 aa22.96■■□□□ 1.27
VCAN-204ENST00000502527 CHD1O14646 1710 aa22.94■■□□□ 1.26
VCAN-204ENST00000502527 KIF7Q2M1P5 1343 aa22.94■■□□□ 1.26
VCAN-204ENST00000502527 CCDC141Q6ZP82 1450 aa22.93■■□□□ 1.26
VCAN-204ENST00000502527 SHROOM2Q13796 1616 aa22.93■■□□□ 1.26
VCAN-204ENST00000502527 PREX2Q70Z35 1606 aa22.92■■□□□ 1.26
VCAN-204ENST00000502527 PRKRIP1Q9H875 184 aaPredicted RBP22.92■■□□□ 1.26
VCAN-204ENST00000502527 HNRNPUQ00839 825 aaKnown RBP eCLIP22.91■■□□□ 1.26
VCAN-204ENST00000502527 SAMD9LQ8IVG5 1584 aa22.91■■□□□ 1.26
VCAN-204ENST00000502527 POLR1AO95602 1720 aaPredicted RBP22.9■■□□□ 1.26
VCAN-204ENST00000502527 UHRF1BP1Q6BDS2 1440 aa22.89■■□□□ 1.26
VCAN-204ENST00000502527 CDC42BPBQ9Y5S2 1711 aa22.88■■□□□ 1.25
VCAN-204ENST00000502527 USP47Q96K76 1375 aa22.88■■□□□ 1.25
VCAN-204ENST00000502527 ARHGEF12Q9NZN5 1544 aa22.88■■□□□ 1.25
VCAN-204ENST00000502527 ZNF326Q5BKZ1 582 aaKnown RBP22.87■■□□□ 1.25
VCAN-204ENST00000502527 BCANQ96GW7 911 aa22.85■■□□□ 1.25
VCAN-204ENST00000502527 ARID4BQ4LE39 1312 aaPredicted RBP22.84■■□□□ 1.25
VCAN-204ENST00000502527 ABCC2Q92887 1545 aa22.84■■□□□ 1.25
VCAN-204ENST00000502527 RALGAPBQ86X10 1494 aa22.83■■□□□ 1.25
VCAN-204ENST00000502527 ARHGAP5Q13017 1502 aa22.82■■□□□ 1.24
VCAN-204ENST00000502527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.81■■□□□ 1.24
VCAN-204ENST00000502527 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
VCAN-204ENST00000502527 TTC37Q6PGP7 1564 aa22.81■■□□□ 1.24
VCAN-204ENST00000502527 MAST1Q9Y2H9 1570 aa22.81■■□□□ 1.24
VCAN-204ENST00000502527 MRS2Q9HD23 443 aa22.8■■□□□ 1.24
VCAN-204ENST00000502527 KDM5CP41229 1560 aa22.8■■□□□ 1.24
VCAN-204ENST00000502527 SYCP2Q9BX26 1530 aa22.8■■□□□ 1.24
VCAN-204ENST00000502527 PLEKHH2Q8IVE3 1493 aa22.8■■□□□ 1.24
VCAN-204ENST00000502527 FAM135AQ9P2D6 1515 aa22.79■■□□□ 1.24
VCAN-204ENST00000502527 TSHZ2Q9NRE2 1034 aa22.77■■□□□ 1.24
VCAN-204ENST00000502527 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
VCAN-204ENST00000502527 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
VCAN-204ENST00000502527 BCORL1Q5H9F3 1711 aa22.75■■□□□ 1.23
VCAN-204ENST00000502527 ROCK2O75116 1388 aaKnown RBP22.74■■□□□ 1.23
VCAN-204ENST00000502527 DHX29Q7Z478 1369 aaKnown RBP22.74■■□□□ 1.23
VCAN-204ENST00000502527 FAM9BQ8IZU0 186 aa22.73■■□□□ 1.23
VCAN-204ENST00000502527 MYO5CQ9NQX4 1742 aa22.73■■□□□ 1.23
VCAN-204ENST00000502527 DCAF11Q8TEB1 546 aa22.73■■□□□ 1.23
VCAN-204ENST00000502527 KDM2AQ9Y2K7 1162 aa22.72■■□□□ 1.23
VCAN-204ENST00000502527 UNC13BO14795 1591 aa22.72■■□□□ 1.23
VCAN-204ENST00000502527 PLXNC1O60486 1568 aa22.71■■□□□ 1.23
VCAN-204ENST00000502527 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms