RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 ABCA8O94911 1581 aa10.25□□□□□ -0.77
LYSMD3-203ENST00000500869 CDC42BPAQ5VT25 1732 aa10.25□□□□□ -0.77
LYSMD3-203ENST00000500869 SYNJ2O15056 1496 aa10.24□□□□□ -0.77
LYSMD3-203ENST00000500869 TROQ12816 1431 aaPredicted RBP10.24□□□□□ -0.77
LYSMD3-203ENST00000500869 KIF14Q15058 1648 aa10.24□□□□□ -0.77
LYSMD3-203ENST00000500869 NCOA1Q15788 1441 aa10.23□□□□□ -0.77
LYSMD3-203ENST00000500869 ANKRD30BQ9BXX2 1392 aa10.23□□□□□ -0.77
LYSMD3-203ENST00000500869 PZPP20742 1482 aa10.22□□□□□ -0.77
LYSMD3-203ENST00000500869 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
LYSMD3-203ENST00000500869 CAMSAP2Q08AD1 1489 aa10.22□□□□□ -0.77
LYSMD3-203ENST00000500869 ARHGEF5Q12774 1597 aa10.22□□□□□ -0.77
LYSMD3-203ENST00000500869 CNTLNQ9NXG0 1405 aa10.22□□□□□ -0.77
LYSMD3-203ENST00000500869 ABCC10Q5T3U5 1492 aa10.2□□□□□ -0.78
LYSMD3-203ENST00000500869 DDX10Q13206 875 aaKnown RBP10.2□□□□□ -0.78
LYSMD3-203ENST00000500869 GPATCH8Q9UKJ3 1502 aaKnown RBP10.19□□□□□ -0.78
LYSMD3-203ENST00000500869 KCNH8Q96L42 1107 aa10.19□□□□□ -0.78
LYSMD3-203ENST00000500869 ARHGEF12Q9NZN5 1544 aa10.19□□□□□ -0.78
LYSMD3-203ENST00000500869 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
LYSMD3-203ENST00000500869 ANP32CO43423 234 aa10.18□□□□□ -0.78
LYSMD3-203ENST00000500869 DNAJC5BQ9UF47 199 aa10.18□□□□□ -0.78
LYSMD3-203ENST00000500869 KDM5CP41229 1560 aa10.17□□□□□ -0.78
LYSMD3-203ENST00000500869 MAST1Q9Y2H9 1570 aa10.17□□□□□ -0.78
LYSMD3-203ENST00000500869 UHRF1BP1Q6BDS2 1440 aa10.17□□□□□ -0.78
LYSMD3-203ENST00000500869 E9PCH4 1651 aa10.16□□□□□ -0.78
LYSMD3-203ENST00000500869 PTPRGP23470 1445 aa10.16□□□□□ -0.78
LYSMD3-203ENST00000500869 MPHOSPH9Q99550 1183 aa10.16□□□□□ -0.78
LYSMD3-203ENST00000500869 SHROOM2Q13796 1616 aa10.15□□□□□ -0.78
LYSMD3-203ENST00000500869 PREX2Q70Z35 1606 aa10.15□□□□□ -0.78
LYSMD3-203ENST00000500869 LAMC1P11047 1609 aa10.15□□□□□ -0.78
LYSMD3-203ENST00000500869 WASHC2AQ641Q2 1341 aa10.15□□□□□ -0.78
LYSMD3-203ENST00000500869 KIAA1107Q9UPP5 1409 aa10.14□□□□□ -0.79
LYSMD3-203ENST00000500869 CCDC7Q96M83 1385 aa10.14□□□□□ -0.79
LYSMD3-203ENST00000500869 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
LYSMD3-203ENST00000500869 UNC13BO14795 1591 aa10.13□□□□□ -0.79
LYSMD3-203ENST00000500869 RALGAPBQ86X10 1494 aa10.13□□□□□ -0.79
LYSMD3-203ENST00000500869 BCORL1Q5H9F3 1711 aa10.12□□□□□ -0.79
LYSMD3-203ENST00000500869 CARMIL2Q6F5E8 1435 aa10.12□□□□□ -0.79
LYSMD3-203ENST00000500869 HSPA5P11021 654 aaKnown RBP10.12□□□□□ -0.79
LYSMD3-203ENST00000500869 PRG4Q92954 1404 aaPredicted RBP10.12□□□□□ -0.79
LYSMD3-203ENST00000500869 ERICH6BQ5W0A0 696 aa10.11□□□□□ -0.79
LYSMD3-203ENST00000500869 PLB1Q6P1J6 1458 aa10.11□□□□□ -0.79
LYSMD3-203ENST00000500869 ARID4BQ4LE39 1312 aaPredicted RBP10.11□□□□□ -0.79
LYSMD3-203ENST00000500869 CDK11AQ9UQ88 783 aaPredicted RBP10.11□□□□□ -0.79
LYSMD3-203ENST00000500869 PLXNC1O60486 1568 aa10.11□□□□□ -0.79
LYSMD3-203ENST00000500869 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
LYSMD3-203ENST00000500869 EIF4G2P78344 907 aaKnown RBP eCLIP10.1□□□□□ -0.79
LYSMD3-203ENST00000500869 RRP7BPQ9NSQ0 103 aa10.1□□□□□ -0.79
LYSMD3-203ENST00000500869 SAMD9LQ8IVG5 1584 aa10.08□□□□□ -0.8
LYSMD3-203ENST00000500869 ATP10BO94823 1461 aa10.08□□□□□ -0.8
LYSMD3-203ENST00000500869 L3MBTL2Q969R5 705 aa10.08□□□□□ -0.8
LYSMD3-203ENST00000500869 ANKRD30AQ9BXX3 1397 aa10.07□□□□□ -0.8
LYSMD3-203ENST00000500869 TRPM1Q7Z4N2 1603 aa10.07□□□□□ -0.8
LYSMD3-203ENST00000500869 MAGI2Q86UL8 1455 aa10.07□□□□□ -0.8
LYSMD3-203ENST00000500869 IQGAP3Q86VI3 1631 aa10.07□□□□□ -0.8
LYSMD3-203ENST00000500869 DHX29Q7Z478 1369 aaKnown RBP10.06□□□□□ -0.8
LYSMD3-203ENST00000500869 C9orf84Q5VXU9 1444 aa10.05□□□□□ -0.8
LYSMD3-203ENST00000500869 ANKRD50Q9ULJ7 1429 aa10.05□□□□□ -0.8
LYSMD3-203ENST00000500869 NBPF8Q3BBV2 869 aa10.05□□□□□ -0.8
LYSMD3-203ENST00000500869 CHIC2Q9UKJ5 165 aa10.04□□□□□ -0.8
LYSMD3-203ENST00000500869 ZMYM4Q5VZL5 1548 aa10.04□□□□□ -0.8
LYSMD3-203ENST00000500869 RNF17Q9BXT8 1623 aaKnown RBP10.04□□□□□ -0.8
LYSMD3-203ENST00000500869 FKBP8Q14318 412 aa10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 PRKRIP1Q9H875 184 aaPredicted RBP10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 CHD1O14646 1710 aa10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 ROCK2O75116 1388 aaKnown RBP10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 ERCC6Q03468 1493 aa10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 CCDC141Q6ZP82 1450 aa10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 MYO5CQ9NQX4 1742 aa10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 HIRIP3Q9BW71 556 aaPredicted RBP10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 ATP10AO60312 1499 aa10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 ZBED9Q6R2W3 1325 aa10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 ZNF644Q9H582 1327 aaPredicted RBP10.03□□□□□ -0.8
LYSMD3-203ENST00000500869 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.8
LYSMD3-203ENST00000500869 KTN1Q86UP2 1357 aaKnown RBP10.02□□□□□ -0.8
LYSMD3-203ENST00000500869 TRIM52Q96A61 297 aa10.02□□□□□ -0.81
LYSMD3-203ENST00000500869 EIF2AK4Q9P2K8 1649 aaKnown RBP10.02□□□□□ -0.81
LYSMD3-203ENST00000500869 C11orf95C9JLR9 678 aaPredicted RBP10.02□□□□□ -0.81
LYSMD3-203ENST00000500869 NEFLP07196 543 aa10.02□□□□□ -0.81
LYSMD3-203ENST00000500869 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
LYSMD3-203ENST00000500869 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
LYSMD3-203ENST00000500869 NEURL4Q96JN8 1562 aa10□□□□□ -0.81
LYSMD3-203ENST00000500869 INSRP06213 1382 aa10□□□□□ -0.81
LYSMD3-203ENST00000500869 PRDM15P57071 1507 aaPredicted RBP10□□□□□ -0.81
LYSMD3-203ENST00000500869 ARAP3Q8WWN8 1544 aa10□□□□□ -0.81
LYSMD3-203ENST00000500869 CFDP1Q9UEE9 299 aaPredicted RBP10□□□□□ -0.81
LYSMD3-203ENST00000500869 SMG6Q86US8 1419 aaKnown RBP9.99□□□□□ -0.81
LYSMD3-203ENST00000500869 PLEKHH2Q8IVE3 1493 aa9.99□□□□□ -0.81
LYSMD3-203ENST00000500869 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
LYSMD3-203ENST00000500869 GPRASP1Q5JY77 1395 aa9.99□□□□□ -0.81
LYSMD3-203ENST00000500869 USP47Q96K76 1375 aa9.99□□□□□ -0.81
LYSMD3-203ENST00000500869 ABCC2Q92887 1545 aa9.99□□□□□ -0.81
LYSMD3-203ENST00000500869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.98□□□□□ -0.81
LYSMD3-203ENST00000500869 RNF123Q5XPI4 1314 aa9.98□□□□□ -0.81
LYSMD3-203ENST00000500869 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
LYSMD3-203ENST00000500869 UHRF1BP1LA0JNW5 1464 aa9.97□□□□□ -0.81
LYSMD3-203ENST00000500869 DEPDC5O75140 1603 aa9.97□□□□□ -0.81
LYSMD3-203ENST00000500869 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.81
LYSMD3-203ENST00000500869 DUOX2Q9NRD8 1548 aa9.96□□□□□ -0.81
LYSMD3-203ENST00000500869 LRPPRCP42704 1394 aaKnown RBP9.96□□□□□ -0.82
LYSMD3-203ENST00000500869 CLASP1Q7Z460 1538 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms