RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 PLB1Q6P1J6 1458 aa14.33□□□□□ -0.12
LINC00461-201ENST00000500197 ATP10BO94823 1461 aa14.3□□□□□ -0.12
LINC00461-201ENST00000500197 CENPBP07199 599 aaPredicted RBP14.3□□□□□ -0.12
LINC00461-201ENST00000500197 PPP1R15AO75807 674 aaPredicted RBP14.29□□□□□ -0.12
LINC00461-201ENST00000500197 UHRF1BP1LA0JNW5 1464 aa14.29□□□□□ -0.12
LINC00461-201ENST00000500197 CDK11AQ9UQ88 783 aaPredicted RBP14.28□□□□□ -0.12
LINC00461-201ENST00000500197 CDC42BPBQ9Y5S2 1711 aa14.28□□□□□ -0.12
LINC00461-201ENST00000500197 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
LINC00461-201ENST00000500197 RPRD2Q5VT52 1461 aaKnown RBP14.26□□□□□ -0.13
LINC00461-201ENST00000500197 TEX14Q8IWB6 1497 aa14.26□□□□□ -0.13
LINC00461-201ENST00000500197 PRG4Q92954 1404 aaPredicted RBP14.26□□□□□ -0.13
LINC00461-201ENST00000500197 MBD5Q9P267 1494 aa14.25□□□□□ -0.13
LINC00461-201ENST00000500197 PLXNC1O60486 1568 aa14.25□□□□□ -0.13
LINC00461-201ENST00000500197 ABCC2Q92887 1545 aa14.25□□□□□ -0.13
LINC00461-201ENST00000500197 NCOA1Q15788 1441 aa14.25□□□□□ -0.13
LINC00461-201ENST00000500197 PZPP20742 1482 aa14.25□□□□□ -0.13
LINC00461-201ENST00000500197 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
LINC00461-201ENST00000500197 JPH4Q96JJ6 628 aa14.25□□□□□ -0.13
LINC00461-201ENST00000500197 MIER1Q8N108 512 aa14.24□□□□□ -0.13
LINC00461-201ENST00000500197 ARAP3Q8WWN8 1544 aa14.24□□□□□ -0.13
LINC00461-201ENST00000500197 PTPRGP23470 1445 aa14.24□□□□□ -0.13
LINC00461-201ENST00000500197 UNC13BO14795 1591 aa14.23□□□□□ -0.13
LINC00461-201ENST00000500197 SAMD9LQ8IVG5 1584 aa14.22□□□□□ -0.13
LINC00461-201ENST00000500197 ATP1B4Q9UN42 357 aaPredicted RBP14.22□□□□□ -0.13
LINC00461-201ENST00000500197 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
LINC00461-201ENST00000500197 ITGAEP38570 1179 aa14.22□□□□□ -0.13
LINC00461-201ENST00000500197 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
LINC00461-201ENST00000500197 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.13
LINC00461-201ENST00000500197 ARHGEF12Q9NZN5 1544 aa14.18□□□□□ -0.14
LINC00461-201ENST00000500197 MAGI2Q86UL8 1455 aa14.17□□□□□ -0.14
LINC00461-201ENST00000500197 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
LINC00461-201ENST00000500197 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
LINC00461-201ENST00000500197 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
LINC00461-201ENST00000500197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.14
LINC00461-201ENST00000500197 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
LINC00461-201ENST00000500197 ZCCHC11Q5TAX3 1644 aaKnown RBP14.15□□□□□ -0.14
LINC00461-201ENST00000500197 TTC37Q6PGP7 1564 aa14.15□□□□□ -0.14
LINC00461-201ENST00000500197 UHRF1BP1Q6BDS2 1440 aa14.14□□□□□ -0.15
LINC00461-201ENST00000500197 IQGAP3Q86VI3 1631 aa14.14□□□□□ -0.15
LINC00461-201ENST00000500197 CCDC141Q6ZP82 1450 aa14.13□□□□□ -0.15
LINC00461-201ENST00000500197 ANKRD30AQ9BXX3 1397 aa14.13□□□□□ -0.15
LINC00461-201ENST00000500197 LAMC1P11047 1609 aa14.12□□□□□ -0.15
LINC00461-201ENST00000500197 MPHOSPH9Q99550 1183 aa14.12□□□□□ -0.15
LINC00461-201ENST00000500197 C9orf84Q5VXU9 1444 aa14.12□□□□□ -0.15
LINC00461-201ENST00000500197 SPATA31E1Q6ZUB1 1445 aa14.12□□□□□ -0.15
LINC00461-201ENST00000500197 RSPH4AQ5TD94 716 aa14.1□□□□□ -0.15
LINC00461-201ENST00000500197 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
LINC00461-201ENST00000500197 ERCC6L2Q5T890 1561 aa14.09□□□□□ -0.15
LINC00461-201ENST00000500197 ATP10AO60312 1499 aa14.08□□□□□ -0.15
LINC00461-201ENST00000500197 ANKRD50Q9ULJ7 1429 aa14.08□□□□□ -0.16
LINC00461-201ENST00000500197 ABCC1P33527 1531 aa14.08□□□□□ -0.16
LINC00461-201ENST00000500197 NEURL4Q96JN8 1562 aa14.08□□□□□ -0.16
LINC00461-201ENST00000500197 DEPDC5O75140 1603 aa14.07□□□□□ -0.16
LINC00461-201ENST00000500197 ABCA9Q8IUA7 1624 aa14.07□□□□□ -0.16
LINC00461-201ENST00000500197 CFDP1Q9UEE9 299 aaPredicted RBP14.06□□□□□ -0.16
LINC00461-201ENST00000500197 KDM5CP41229 1560 aa14.06□□□□□ -0.16
LINC00461-201ENST00000500197 WDR7Q9Y4E6 1490 aa14.06□□□□□ -0.16
LINC00461-201ENST00000500197 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
LINC00461-201ENST00000500197 ZNF644Q9H582 1327 aaPredicted RBP14.05□□□□□ -0.16
LINC00461-201ENST00000500197 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
LINC00461-201ENST00000500197 DUOX2Q9NRD8 1548 aa14.04□□□□□ -0.16
LINC00461-201ENST00000500197 RALGAPBQ86X10 1494 aa14.04□□□□□ -0.16
LINC00461-201ENST00000500197 ERBINQ96RT1 1412 aa14.03□□□□□ -0.16
LINC00461-201ENST00000500197 SYCP2Q9BX26 1530 aa14.03□□□□□ -0.16
LINC00461-201ENST00000500197 FAM135AQ9P2D6 1515 aa14.02□□□□□ -0.16
LINC00461-201ENST00000500197 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.16
LINC00461-201ENST00000500197 PLCH2O75038 1416 aa14.02□□□□□ -0.16
LINC00461-201ENST00000500197 E9PCH4 1651 aa14.01□□□□□ -0.17
LINC00461-201ENST00000500197 INO80Q9ULG1 1556 aaPredicted RBP14.01□□□□□ -0.17
LINC00461-201ENST00000500197 RTEL1-TNFRSF6BF6WH68 1400 aa14□□□□□ -0.17
LINC00461-201ENST00000500197 BCORL1Q5H9F3 1711 aa14□□□□□ -0.17
LINC00461-201ENST00000500197 VWDEQ8N2E2 1590 aa13.99□□□□□ -0.17
LINC00461-201ENST00000500197 TRPM1Q7Z4N2 1603 aa13.99□□□□□ -0.17
LINC00461-201ENST00000500197 ARID4BQ4LE39 1312 aaPredicted RBP13.98□□□□□ -0.17
LINC00461-201ENST00000500197 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
LINC00461-201ENST00000500197 ARHGAP5Q13017 1502 aa13.98□□□□□ -0.17
LINC00461-201ENST00000500197 GTF3C3Q9Y5Q9 886 aa13.98□□□□□ -0.17
LINC00461-201ENST00000500197 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
LINC00461-201ENST00000500197 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
LINC00461-201ENST00000500197 KIF15Q9NS87 1388 aa13.97□□□□□ -0.17
LINC00461-201ENST00000500197 CHIC2Q9UKJ5 165 aa13.97□□□□□ -0.17
LINC00461-201ENST00000500197 ZFYVE16Q7Z3T8 1539 aa13.96□□□□□ -0.17
LINC00461-201ENST00000500197 L3MBTL2Q969R5 705 aa13.94□□□□□ -0.18
LINC00461-201ENST00000500197 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
LINC00461-201ENST00000500197 CEP152O94986 1710 aa13.93□□□□□ -0.18
LINC00461-201ENST00000500197 CCDC7Q96M83 1385 aa13.92□□□□□ -0.18
LINC00461-201ENST00000500197 FBLN2P98095 1184 aa13.92□□□□□ -0.18
LINC00461-201ENST00000500197 TET3O43151 1660 aa13.92□□□□□ -0.18
LINC00461-201ENST00000500197 WASHC2AQ641Q2 1341 aa13.91□□□□□ -0.18
LINC00461-201ENST00000500197 PRDM15P57071 1507 aaPredicted RBP13.91□□□□□ -0.18
LINC00461-201ENST00000500197 TRIM52Q96A61 297 aa13.91□□□□□ -0.18
LINC00461-201ENST00000500197 KIAA1210Q9ULL0 1709 aa13.91□□□□□ -0.18
LINC00461-201ENST00000500197 GPRASP1Q5JY77 1395 aa13.9□□□□□ -0.18
LINC00461-201ENST00000500197 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC00461-201ENST00000500197 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
LINC00461-201ENST00000500197 PLA2R1Q13018 1463 aa13.89□□□□□ -0.19
LINC00461-201ENST00000500197 TRPM2O94759 1503 aa13.89□□□□□ -0.19
LINC00461-201ENST00000500197 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
LINC00461-201ENST00000500197 SPHKAPQ2M3C7 1700 aa13.89□□□□□ -0.19
LINC00461-201ENST00000500197 NBPF8Q3BBV2 869 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms