RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 DOK7Q18PE1 504 aa8.92□□□□□ -0.98
CMSS1-209ENST00000497345 EMP3P54852 163 aa8.91□□□□□ -0.98
CMSS1-209ENST00000497345 ZNF710Q8N1W2 664 aa8.91□□□□□ -0.98
CMSS1-209ENST00000497345 HOXB1P14653 301 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-209ENST00000497345 HS6ST3Q8IZP7 471 aa8.88□□□□□ -0.99
CMSS1-209ENST00000497345 SHROOM4Q9ULL8 1493 aa8.88□□□□□ -0.99
CMSS1-209ENST00000497345 FAM205CA6NFA0 338 aa8.87□□□□□ -0.99
CMSS1-209ENST00000497345 RIMBP2O15034 1052 aa8.86□□□□□ -0.99
CMSS1-209ENST00000497345 HS3ST6Q96QI5 342 aa8.86□□□□□ -0.99
CMSS1-209ENST00000497345 POTEB3A0JP26 581 aa8.85□□□□□ -0.99
CMSS1-209ENST00000497345 PPP1R37O75864 691 aa8.85□□□□□ -0.99
CMSS1-209ENST00000497345 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
CMSS1-209ENST00000497345 POTEBQ6S5H4 581 aa8.85□□□□□ -0.99
CMSS1-209ENST00000497345 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
CMSS1-209ENST00000497345 C2orf72A6NCS6 295 aa8.82□□□□□ -1
CMSS1-209ENST00000497345 KIF3CO14782 793 aa8.82□□□□□ -1
CMSS1-209ENST00000497345 GPR153Q6NV75 609 aa8.81□□□□□ -1
CMSS1-209ENST00000497345 ERBB3P21860 1342 aa8.8□□□□□ -1
CMSS1-209ENST00000497345 DNAJC5Q9H3Z4 198 aa8.79□□□□□ -1
CMSS1-209ENST00000497345 TMC2Q8TDI7 906 aa8.78□□□□□ -1
CMSS1-209ENST00000497345 ARSIQ5FYB1 569 aa8.77□□□□□ -1.01
CMSS1-209ENST00000497345 SPNS2Q8IVW8 549 aa8.77□□□□□ -1.01
CMSS1-209ENST00000497345 NKX1-1Q15270 411 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-209ENST00000497345 KRTAP3-3Q9BYR6 98 aa8.76□□□□□ -1.01
CMSS1-209ENST00000497345 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
CMSS1-209ENST00000497345 VARS2Q5ST30 1063 aaKnown RBP8.74□□□□□ -1.01
CMSS1-209ENST00000497345 KHSRPQ92945 711 aaKnown RBP eCLIP8.73□□□□□ -1.01
CMSS1-209ENST00000497345 SLC34A2O95436 690 aa8.72□□□□□ -1.01
CMSS1-209ENST00000497345 MMRN1Q13201 1228 aa8.72□□□□□ -1.01
CMSS1-209ENST00000497345 RYDENQ9NUL5 291 aaKnown RBP8.72□□□□□ -1.01
CMSS1-209ENST00000497345 DCAF1Q9Y4B6 1507 aa8.71□□□□□ -1.01
CMSS1-209ENST00000497345 ZNF687Q8N1G0 1237 aa8.7□□□□□ -1.02
CMSS1-209ENST00000497345 GPHNQ9NQX3 736 aaPredicted RBP8.7□□□□□ -1.02
CMSS1-209ENST00000497345 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-209ENST00000497345 PCDHGA4Q9Y5G9 962 aa8.69□□□□□ -1.02
CMSS1-209ENST00000497345 FOXK1P85037 733 aa8.68□□□□□ -1.02
CMSS1-209ENST00000497345 NACADO15069 1562 aa8.67□□□□□ -1.02
CMSS1-209ENST00000497345 NUDT7P0C024 238 aa8.67□□□□□ -1.02
CMSS1-209ENST00000497345 SCRIBQ14160 1630 aa8.66□□□□□ -1.02
CMSS1-209ENST00000497345 PLPP6Q8IY26 295 aa8.66□□□□□ -1.02
CMSS1-209ENST00000497345 GTPBP6O43824 516 aaPredicted RBP8.65□□□□□ -1.02
CMSS1-209ENST00000497345 DSG2Q14126 1118 aa8.65□□□□□ -1.02
CMSS1-209ENST00000497345 PTCD2Q8WV60 388 aaKnown RBP8.64□□□□□ -1.03
CMSS1-209ENST00000497345 RB1CC1Q8TDY2 1594 aa8.64□□□□□ -1.03
CMSS1-209ENST00000497345 LHX6Q9UPM6 363 aa8.63□□□□□ -1.03
CMSS1-209ENST00000497345 MYO15BQ96JP2 1530 aa8.6□□□□□ -1.03
CMSS1-209ENST00000497345 CRISPLD2Q9H0B8 497 aa8.6□□□□□ -1.03
CMSS1-209ENST00000497345 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
CMSS1-209ENST00000497345 TBC1D12O60347 775 aa8.59□□□□□ -1.03
CMSS1-209ENST00000497345 PDE4AP27815 886 aa8.59□□□□□ -1.03
CMSS1-209ENST00000497345 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
CMSS1-209ENST00000497345 PPP1R15BQ5SWA1 713 aa8.56□□□□□ -1.04
CMSS1-209ENST00000497345 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
CMSS1-209ENST00000497345 PSDA5PKW4 1024 aaPredicted RBP8.55□□□□□ -1.04
CMSS1-209ENST00000497345 PBX2P40425 430 aa8.55□□□□□ -1.04
CMSS1-209ENST00000497345 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
CMSS1-209ENST00000497345 POTEEQ6S8J3 1075 aa8.54□□□□□ -1.04
CMSS1-209ENST00000497345 OXER1Q8TDS5 423 aa8.54□□□□□ -1.04
CMSS1-209ENST00000497345 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
CMSS1-209ENST00000497345 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
CMSS1-209ENST00000497345 UPF1Q92900 1129 aaKnown RBP eCLIP8.52□□□□□ -1.05
CMSS1-209ENST00000497345 MYT1LQ9UL68 1186 aa8.52□□□□□ -1.05
CMSS1-209ENST00000497345 SUPT5HO00267 1087 aaKnown RBP8.51□□□□□ -1.05
CMSS1-209ENST00000497345 PTGER2P43116 358 aa8.51□□□□□ -1.05
CMSS1-209ENST00000497345 AMER1Q5JTC6 1135 aaPredicted RBP8.51□□□□□ -1.05
CMSS1-209ENST00000497345 BBXQ8WY36 941 aaPredicted RBP8.51□□□□□ -1.05
CMSS1-209ENST00000497345 ARHGAP33O14559 1287 aa8.5□□□□□ -1.05
CMSS1-209ENST00000497345 RNF166Q96A37 237 aaPredicted RBP8.5□□□□□ -1.05
CMSS1-209ENST00000497345 DDX27Q96GQ7 796 aaKnown RBP8.5□□□□□ -1.05
CMSS1-209ENST00000497345 MFSD10Q14728 455 aa8.48□□□□□ -1.05
CMSS1-209ENST00000497345 PPP4R3BQ5MIZ7 849 aa8.48□□□□□ -1.05
CMSS1-209ENST00000497345 CADPS2Q86UW7 1296 aa8.48□□□□□ -1.05
CMSS1-209ENST00000497345 UNC13AQ9UPW8 1703 aa8.48□□□□□ -1.05
CMSS1-209ENST00000497345 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
CMSS1-209ENST00000497345 PSEN2P49810 448 aa8.45□□□□□ -1.06
CMSS1-209ENST00000497345 ANO8Q9HCE9 1232 aaPredicted RBP8.45□□□□□ -1.06
CMSS1-209ENST00000497345 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
CMSS1-209ENST00000497345 EVI5O60447 810 aa8.43□□□□□ -1.06
CMSS1-209ENST00000497345 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
CMSS1-209ENST00000497345 ADGRD1Q6QNK2 874 aa8.43□□□□□ -1.06
CMSS1-209ENST00000497345 ZNF454Q8N9F8 522 aa8.42□□□□□ -1.06
CMSS1-209ENST00000497345 EMILIN3Q9NT22 766 aa8.42□□□□□ -1.06
CMSS1-209ENST00000497345 TK2O00142 265 aa8.41□□□□□ -1.06
CMSS1-209ENST00000497345 SPRYD3Q8NCJ5 442 aa8.41□□□□□ -1.06
CMSS1-209ENST00000497345 FOSBP53539 338 aa8.4□□□□□ -1.06
CMSS1-209ENST00000497345 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.4□□□□□ -1.06
CMSS1-209ENST00000497345 KCNH8Q96L42 1107 aa8.39□□□□□ -1.07
CMSS1-209ENST00000497345 KCNK17Q96T54 332 aa8.39□□□□□ -1.07
CMSS1-209ENST00000497345 HRO43593 1189 aa8.38□□□□□ -1.07
CMSS1-209ENST00000497345 BCL2L12Q9HB09 334 aa8.38□□□□□ -1.07
CMSS1-209ENST00000497345 BICRAQ9NZM4 1560 aa8.37□□□□□ -1.07
CMSS1-209ENST00000497345 JPH4Q96JJ6 628 aa8.37□□□□□ -1.07
CMSS1-209ENST00000497345 CAMK2BQ13554 666 aa8.36□□□□□ -1.07
CMSS1-209ENST00000497345 CECR2Q9BXF3 1484 aa8.36□□□□□ -1.07
CMSS1-209ENST00000497345 PTPREP23469 700 aa8.35□□□□□ -1.07
CMSS1-209ENST00000497345 ZDHHC16Q969W1 377 aa8.35□□□□□ -1.07
CMSS1-209ENST00000497345 STAC3Q96MF2 364 aa8.34□□□□□ -1.07
CMSS1-209ENST00000497345 VPS9D1Q9Y2B5 631 aa8.34□□□□□ -1.07
CMSS1-209ENST00000497345 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
CMSS1-209ENST00000497345 CFAP44Q96MT7 982 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 380.7 ms