RNA–Protein interactions for RNA: ENST00000497183.5

PRKCZ-223, Transcript of protein kinase C zeta, human

TSL 3

Gene PRKCZ, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-223	ENST00000497183	KIF14	Q15058	1648 aa		12.59	□□□□□ -0.39
PRKCZ-223	ENST00000497183	CSRNP3	Q8WYN3	585 aa		12.59	□□□□□ -0.39
PRKCZ-223	ENST00000497183	KDM5C	P41229	1560 aa		12.57	□□□□□ -0.4
PRKCZ-223	ENST00000497183	CDC42BPB	Q9Y5S2	1711 aa		12.56	□□□□□ -0.4
PRKCZ-223	ENST00000497183	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.56	□□□□□ -0.4
PRKCZ-223	ENST00000497183	PLCH2	O75038	1416 aa		12.55	□□□□□ -0.4
PRKCZ-223	ENST00000497183	C3	P01024	1663 aa		12.55	□□□□□ -0.4
PRKCZ-223	ENST00000497183	EEA1	Q15075	1411 aa		12.54	□□□□□ -0.4
PRKCZ-223	ENST00000497183	DIP2C	Q9Y2E4	1556 aa		12.54	□□□□□ -0.4
PRKCZ-223	ENST00000497183	ABCA6	Q8N139	1617 aa		12.54	□□□□□ -0.4
PRKCZ-223	ENST00000497183	RERE	Q9P2R6	1566 aa		12.53	□□□□□ -0.4
PRKCZ-223	ENST00000497183	SCAPER	Q9BY12	1400 aa		12.53	□□□□□ -0.4
PRKCZ-223	ENST00000497183	ATP10A	O60312	1499 aa		12.53	□□□□□ -0.4
PRKCZ-223	ENST00000497183	SETD1B	Q9UPS6	1966 aa	Known RBP	12.52	□□□□□ -0.4
PRKCZ-223	ENST00000497183	PLEKHD1	A6NEE1	506 aa		12.52	□□□□□ -0.41
PRKCZ-223	ENST00000497183	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.52	□□□□□ -0.41
PRKCZ-223	ENST00000497183	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.52	□□□□□ -0.41
PRKCZ-223	ENST00000497183	C9orf84	Q5VXU9	1444 aa		12.52	□□□□□ -0.41
PRKCZ-223	ENST00000497183	PREX2	Q70Z35	1606 aa		12.5	□□□□□ -0.41
PRKCZ-223	ENST00000497183	ITSN2	Q9NZM3	1697 aa		12.5	□□□□□ -0.41
PRKCZ-223	ENST00000497183	ARHGAP35	Q9NRY4	1499 aa		12.49	□□□□□ -0.41
PRKCZ-223	ENST00000497183	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.49	□□□□□ -0.41
PRKCZ-223	ENST00000497183	KIDINS220	Q9ULH0	1771 aa		12.48	□□□□□ -0.41
PRKCZ-223	ENST00000497183	CDC42BPA	Q5VT25	1732 aa		12.48	□□□□□ -0.41
PRKCZ-223	ENST00000497183	ZNF518A	Q6AHZ1	1483 aa		12.47	□□□□□ -0.41
PRKCZ-223	ENST00000497183	RANGAP1	P46060	587 aa	Predicted RBP	12.47	□□□□□ -0.41
PRKCZ-223	ENST00000497183	ABCC1	P33527	1531 aa		12.47	□□□□□ -0.41
PRKCZ-223	ENST00000497183	LTBP4	Q8N2S1	1624 aa		12.46	□□□□□ -0.41
PRKCZ-223	ENST00000497183	MLEC	Q14165	292 aa		12.45	□□□□□ -0.42
PRKCZ-223	ENST00000497183	AGL	P35573	1532 aa		12.44	□□□□□ -0.42
PRKCZ-223	ENST00000497183	ARHGAP5	Q13017	1502 aa		12.44	□□□□□ -0.42
PRKCZ-223	ENST00000497183	PLPPR3	Q6T4P5	718 aa		12.44	□□□□□ -0.42
PRKCZ-223	ENST00000497183	TRO	Q12816	1431 aa	Predicted RBP	12.44	□□□□□ -0.42
PRKCZ-223	ENST00000497183	MROH2A	A6NES4	1674 aa		12.43	□□□□□ -0.42
PRKCZ-223	ENST00000497183	MLH3	Q9UHC1	1453 aa		12.43	□□□□□ -0.42
PRKCZ-223	ENST00000497183	CEBPA	P49715	358 aa	Predicted RBP	12.43	□□□□□ -0.42
PRKCZ-223	ENST00000497183	FMN1	Q68DA7	1419 aa		12.43	□□□□□ -0.42
PRKCZ-223	ENST00000497183	UHRF1BP1	Q6BDS2	1440 aa		12.4	□□□□□ -0.42
PRKCZ-223	ENST00000497183	TRAPPC8	Q9Y2L5	1435 aa		12.4	□□□□□ -0.42
PRKCZ-223	ENST00000497183	ZNF142	P52746	1687 aa	Predicted RBP	12.4	□□□□□ -0.42
PRKCZ-223	ENST00000497183	PTPRT	O14522	1441 aa		12.39	□□□□□ -0.43
PRKCZ-223	ENST00000497183	EFCAB2	Q5VUJ9	269 aa		12.39	□□□□□ -0.43
PRKCZ-223	ENST00000497183	AFAP1	Q8N556	730 aa		12.39	□□□□□ -0.43
PRKCZ-223	ENST00000497183	SAMD9L	Q8IVG5	1584 aa		12.39	□□□□□ -0.43
PRKCZ-223	ENST00000497183	NCOA1	Q15788	1441 aa		12.37	□□□□□ -0.43
PRKCZ-223	ENST00000497183	PLXNC1	O60486	1568 aa		12.37	□□□□□ -0.43
PRKCZ-223	ENST00000497183	INO80	Q9ULG1	1556 aa	Predicted RBP	12.36	□□□□□ -0.43
PRKCZ-223	ENST00000497183	IQSEC2	Q5JU85	1478 aa		12.36	□□□□□ -0.43
PRKCZ-223	ENST00000497183	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.36	□□□□□ -0.43
PRKCZ-223	ENST00000497183	MYO3A	Q8NEV4	1616 aa		12.36	□□□□□ -0.43
PRKCZ-223	ENST00000497183	CLTC	Q00610	1675 aa	Known RBP	12.35	□□□□□ -0.43
PRKCZ-223	ENST00000497183	CAMSAP1	Q5T5Y3	1602 aa		12.34	□□□□□ -0.43
PRKCZ-223	ENST00000497183	CLIP1	P30622	1438 aa		12.34	□□□□□ -0.43
PRKCZ-223	ENST00000497183	SYCP2	Q9BX26	1530 aa		12.32	□□□□□ -0.44
PRKCZ-223	ENST00000497183	CASKIN1	Q8WXD9	1431 aa		12.32	□□□□□ -0.44
PRKCZ-223	ENST00000497183	CCDC18	Q5T9S5	1454 aa		12.32	□□□□□ -0.44
PRKCZ-223	ENST00000497183	MED1	Q15648	1581 aa	Predicted RBP	12.31	□□□□□ -0.44
PRKCZ-223	ENST00000497183	NPAT	Q14207	1427 aa		12.3	□□□□□ -0.44
PRKCZ-223	ENST00000497183	CNTLN	Q9NXG0	1405 aa		12.3	□□□□□ -0.44
PRKCZ-223	ENST00000497183	DMRT2	Q9Y5R5	561 aa		12.3	□□□□□ -0.44
PRKCZ-223	ENST00000497183	ATP7A	Q04656	1500 aa		12.3	□□□□□ -0.44
PRKCZ-223	ENST00000497183	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.3	□□□□□ -0.44
PRKCZ-223	ENST00000497183	ADGB	Q8N7X0	1667 aa		12.29	□□□□□ -0.44
PRKCZ-223	ENST00000497183	TCOF1	Q13428	1488 aa	Known RBP	12.28	□□□□□ -0.44
PRKCZ-223	ENST00000497183	FYCO1	Q9BQS8	1478 aa		12.28	□□□□□ -0.44
PRKCZ-223	ENST00000497183	GPATCH8	Q9UKJ3	1502 aa	Known RBP	12.28	□□□□□ -0.44
PRKCZ-223	ENST00000497183	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.28	□□□□□ -0.44
PRKCZ-223	ENST00000497183	POLR1A	O95602	1720 aa	Predicted RBP	12.28	□□□□□ -0.44
PRKCZ-223	ENST00000497183	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.26	□□□□□ -0.45
PRKCZ-223	ENST00000497183	PLA2R1	Q13018	1463 aa		12.26	□□□□□ -0.45
PRKCZ-223	ENST00000497183	NEURL4	Q96JN8	1562 aa		12.26	□□□□□ -0.45
PRKCZ-223	ENST00000497183	UBTF	P17480	764 aa	Known RBP	12.25	□□□□□ -0.45
PRKCZ-223	ENST00000497183	EHMT2	Q96KQ7	1210 aa		12.25	□□□□□ -0.45
PRKCZ-223	ENST00000497183	PTPRK	Q15262	1439 aa		12.25	□□□□□ -0.45
PRKCZ-223	ENST00000497183	DNMT1	P26358	1616 aa	Known RBP	12.25	□□□□□ -0.45
PRKCZ-223	ENST00000497183	ZMYM3	Q14202	1370 aa		12.23	□□□□□ -0.45
PRKCZ-223	ENST00000497183	UBAP1L	F5GYI3	381 aa		12.23	□□□□□ -0.45
PRKCZ-223	ENST00000497183	ALK	Q9UM73	1620 aa		12.22	□□□□□ -0.45
PRKCZ-223	ENST00000497183	TIAM1	Q13009	1591 aa		12.22	□□□□□ -0.45
PRKCZ-223	ENST00000497183	A2M	P01023	1474 aa		12.22	□□□□□ -0.45
PRKCZ-223	ENST00000497183	KIAA1107	Q9UPP5	1409 aa		12.22	□□□□□ -0.45
PRKCZ-223	ENST00000497183	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	12.21	□□□□□ -0.45
PRKCZ-223	ENST00000497183	PHF23	Q9BUL5	403 aa	Predicted RBP	12.21	□□□□□ -0.45
PRKCZ-223	ENST00000497183	NCKAP5L	Q9HCH0	1330 aa		12.19	□□□□□ -0.46
PRKCZ-223	ENST00000497183	STRCP1	A6NGW2	1772 aa		12.19	□□□□□ -0.46
PRKCZ-223	ENST00000497183	MBD5	Q9P267	1494 aa		12.19	□□□□□ -0.46
PRKCZ-223	ENST00000497183	HSPA1L	P34931	641 aa		12.18	□□□□□ -0.46
PRKCZ-223	ENST00000497183	CHIC1	Q5VXU3	224 aa		12.18	□□□□□ -0.46
PRKCZ-223	ENST00000497183	MYT1L	Q9UL68	1186 aa		12.18	□□□□□ -0.46
PRKCZ-223	ENST00000497183	SPAG9	O60271	1321 aa	Known RBP	12.17	□□□□□ -0.46
PRKCZ-223	ENST00000497183	A2ML1	A8K2U0	1454 aa		12.17	□□□□□ -0.46
PRKCZ-223	ENST00000497183	PLEKHH2	Q8IVE3	1493 aa		12.17	□□□□□ -0.46
PRKCZ-223	ENST00000497183	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
PRKCZ-223	ENST00000497183	VWDE	Q8N2E2	1590 aa		12.17	□□□□□ -0.46
PRKCZ-223	ENST00000497183	ESF1	Q9H501	851 aa	Known RBP	12.14	□□□□□ -0.47
PRKCZ-223	ENST00000497183	DEPDC5	O75140	1603 aa		12.14	□□□□□ -0.47
PRKCZ-223	ENST00000497183	EHBP1L1	Q8N3D4	1523 aa		12.13	□□□□□ -0.47
PRKCZ-223	ENST00000497183	FAM135A	Q9P2D6	1515 aa		12.13	□□□□□ -0.47
PRKCZ-223	ENST00000497183	PKD2	Q13563	968 aa		12.13	□□□□□ -0.47
PRKCZ-223	ENST00000497183	CPS1	P31327	1500 aa		12.12	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms