RNA–Protein interactions for RNA: ENST00000497137.1

SPTSSB-202, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SPTSSB, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-202ENST00000497137 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
SPTSSB-202ENST00000497137 C3orf67Q6ZVT6 689 aa11.55□□□□□ -0.56
SPTSSB-202ENST00000497137 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
SPTSSB-202ENST00000497137 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
SPTSSB-202ENST00000497137 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
SPTSSB-202ENST00000497137 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
SPTSSB-202ENST00000497137 TMEM92Q6UXU6 159 aa11.49□□□□□ -0.57
SPTSSB-202ENST00000497137 PDE4AP27815 886 aa11.47□□□□□ -0.57
SPTSSB-202ENST00000497137 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
SPTSSB-202ENST00000497137 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
SPTSSB-202ENST00000497137 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
SPTSSB-202ENST00000497137 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
SPTSSB-202ENST00000497137 C2orf72A6NCS6 295 aa11.45□□□□□ -0.58
SPTSSB-202ENST00000497137 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
SPTSSB-202ENST00000497137 KIF3CO14782 793 aa11.44□□□□□ -0.58
SPTSSB-202ENST00000497137 LARP6Q9BRS8 491 aaKnown RBP11.44□□□□□ -0.58
SPTSSB-202ENST00000497137 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
SPTSSB-202ENST00000497137 FOXK1P85037 733 aa11.38□□□□□ -0.59
SPTSSB-202ENST00000497137 DSG2Q14126 1118 aa11.38□□□□□ -0.59
SPTSSB-202ENST00000497137 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
SPTSSB-202ENST00000497137 WDR70Q9NW82 654 aa11.37□□□□□ -0.59
SPTSSB-202ENST00000497137 MFSD10Q14728 455 aa11.36□□□□□ -0.59
SPTSSB-202ENST00000497137 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
SPTSSB-202ENST00000497137 PLPP6Q8IY26 295 aa11.34□□□□□ -0.59
SPTSSB-202ENST00000497137 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
SPTSSB-202ENST00000497137 SNPHO15079 494 aa11.29□□□□□ -0.6
SPTSSB-202ENST00000497137 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
SPTSSB-202ENST00000497137 ARXQ96QS3 562 aa11.28□□□□□ -0.6
SPTSSB-202ENST00000497137 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
SPTSSB-202ENST00000497137 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
SPTSSB-202ENST00000497137 E2F4Q16254 413 aa11.26□□□□□ -0.61
SPTSSB-202ENST00000497137 CAMK2BQ13554 666 aa11.25□□□□□ -0.61
SPTSSB-202ENST00000497137 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
SPTSSB-202ENST00000497137 SLC34A2O95436 690 aa11.24□□□□□ -0.61
SPTSSB-202ENST00000497137 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
SPTSSB-202ENST00000497137 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
SPTSSB-202ENST00000497137 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
SPTSSB-202ENST00000497137 PTCD2Q8WV60 388 aaKnown RBP11.2□□□□□ -0.62
SPTSSB-202ENST00000497137 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
SPTSSB-202ENST00000497137 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
SPTSSB-202ENST00000497137 RIMBP2O15034 1052 aa11.19□□□□□ -0.62
SPTSSB-202ENST00000497137 OXER1Q8TDS5 423 aa11.19□□□□□ -0.62
SPTSSB-202ENST00000497137 TBC1D12O60347 775 aa11.18□□□□□ -0.62
SPTSSB-202ENST00000497137 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
SPTSSB-202ENST00000497137 NBR1Q14596 966 aa11.17□□□□□ -0.62
SPTSSB-202ENST00000497137 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
SPTSSB-202ENST00000497137 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
SPTSSB-202ENST00000497137 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
SPTSSB-202ENST00000497137 ARSIQ5FYB1 569 aa11.16□□□□□ -0.62
SPTSSB-202ENST00000497137 GPR153Q6NV75 609 aa11.16□□□□□ -0.62
SPTSSB-202ENST00000497137 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
SPTSSB-202ENST00000497137 ST18O60284 1047 aa11.14□□□□□ -0.63
SPTSSB-202ENST00000497137 P3H3Q8IVL6 736 aa11.14□□□□□ -0.63
SPTSSB-202ENST00000497137 ARIH1Q9Y4X5 557 aaPredicted RBP11.14□□□□□ -0.63
SPTSSB-202ENST00000497137 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
SPTSSB-202ENST00000497137 DPYSL4O14531 572 aa11.12□□□□□ -0.63
SPTSSB-202ENST00000497137 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
SPTSSB-202ENST00000497137 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPTSSB-202ENST00000497137 KDM4FA0A1W2PPD8 638 aa11.08□□□□□ -0.64
SPTSSB-202ENST00000497137 EVI5O60447 810 aa11.07□□□□□ -0.64
SPTSSB-202ENST00000497137 NUDT7P0C024 238 aa11.07□□□□□ -0.64
SPTSSB-202ENST00000497137 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
SPTSSB-202ENST00000497137 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
SPTSSB-202ENST00000497137 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
SPTSSB-202ENST00000497137 MARVELD3Q96A59 401 aa11.04□□□□□ -0.64
SPTSSB-202ENST00000497137 PDIA6Q15084 440 aa11.02□□□□□ -0.65
SPTSSB-202ENST00000497137 HOMEZQ8IX15 550 aa11.02□□□□□ -0.65
SPTSSB-202ENST00000497137 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
SPTSSB-202ENST00000497137 LHX6Q9UPM6 363 aa11□□□□□ -0.65
SPTSSB-202ENST00000497137 EMP3P54852 163 aa10.99□□□□□ -0.65
SPTSSB-202ENST00000497137 PTGER2P43116 358 aa10.98□□□□□ -0.65
SPTSSB-202ENST00000497137 SEMA3EO15041 775 aa10.97□□□□□ -0.65
SPTSSB-202ENST00000497137 ERBB3P21860 1342 aa10.97□□□□□ -0.65
SPTSSB-202ENST00000497137 FAM205CA6NFA0 338 aa10.95□□□□□ -0.66
SPTSSB-202ENST00000497137 TMEM132AQ24JP5 1023 aa10.95□□□□□ -0.66
SPTSSB-202ENST00000497137 DDX12PQ92771 950 aa10.94□□□□□ -0.66
SPTSSB-202ENST00000497137 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
SPTSSB-202ENST00000497137 POTEB3A0JP26 581 aa10.92□□□□□ -0.66
SPTSSB-202ENST00000497137 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
SPTSSB-202ENST00000497137 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
SPTSSB-202ENST00000497137 FOSBP53539 338 aa10.92□□□□□ -0.66
SPTSSB-202ENST00000497137 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
SPTSSB-202ENST00000497137 POTEBQ6S5H4 581 aa10.92□□□□□ -0.66
SPTSSB-202ENST00000497137 TESPA1A2RU30 521 aaPredicted RBP10.91□□□□□ -0.66
SPTSSB-202ENST00000497137 PHF14O94880 888 aa10.91□□□□□ -0.66
SPTSSB-202ENST00000497137 C14orf37Q86TY3 774 aa10.91□□□□□ -0.66
SPTSSB-202ENST00000497137 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
SPTSSB-202ENST00000497137 PCDHGA10Q9Y5H3 936 aa10.91□□□□□ -0.66
SPTSSB-202ENST00000497137 JPH4Q96JJ6 628 aa10.9□□□□□ -0.66
SPTSSB-202ENST00000497137 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
SPTSSB-202ENST00000497137 POTEMA6NI47 508 aa10.88□□□□□ -0.67
SPTSSB-202ENST00000497137 PPP4R3BQ5MIZ7 849 aa10.88□□□□□ -0.67
SPTSSB-202ENST00000497137 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
SPTSSB-202ENST00000497137 EPAS1Q99814 870 aa10.88□□□□□ -0.67
SPTSSB-202ENST00000497137 ZDHHC16Q969W1 377 aa10.87□□□□□ -0.67
SPTSSB-202ENST00000497137 OSBPP22059 807 aa10.86□□□□□ -0.67
SPTSSB-202ENST00000497137 SMYD5Q6GMV2 418 aa10.86□□□□□ -0.67
SPTSSB-202ENST00000497137 TYW1BQ6NUM6 668 aa10.86□□□□□ -0.67
SPTSSB-202ENST00000497137 ZNF687Q8N1G0 1237 aa10.86□□□□□ -0.67
SPTSSB-202ENST00000497137 FBXW7Q969H0 707 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms