RNA–Protein interactions for RNA: ENST00000496424.2

LRMDA-208, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2 BASIC

Gene LRMDA, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-208ENST00000496424 ZNF830Q96NB3 372 aaPredicted RBP8.96□□□□□ -0.97
LRMDA-208ENST00000496424 RNF216Q9NWF9 866 aaPredicted RBP8.96□□□□□ -0.97
LRMDA-208ENST00000496424 CHRM1P11229 460 aaPredicted RBP8.96□□□□□ -0.98
LRMDA-208ENST00000496424 PHF23Q9BUL5 403 aaPredicted RBP8.95□□□□□ -0.98
LRMDA-208ENST00000496424 RGS22Q8NE09 1264 aa8.94□□□□□ -0.98
LRMDA-208ENST00000496424 FRAT1Q92837 279 aaPredicted RBP8.94□□□□□ -0.98
LRMDA-208ENST00000496424 PPP4R3BQ5MIZ7 849 aa8.93□□□□□ -0.98
LRMDA-208ENST00000496424 PPP4R2Q9NY27 417 aa8.93□□□□□ -0.98
LRMDA-208ENST00000496424 MTERF4Q7Z6M4 381 aaKnown RBP8.93□□□□□ -0.98
LRMDA-208ENST00000496424 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
LRMDA-208ENST00000496424 PHF14O94880 888 aa8.92□□□□□ -0.98
LRMDA-208ENST00000496424 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
LRMDA-208ENST00000496424 ARID3AQ99856 593 aa8.92□□□□□ -0.98
LRMDA-208ENST00000496424 SOX12O15370 315 aa8.91□□□□□ -0.98
LRMDA-208ENST00000496424 TMED8Q6PL24 325 aaPredicted RBP8.91□□□□□ -0.98
LRMDA-208ENST00000496424 GPATCH11Q8N954 259 aa8.9□□□□□ -0.98
LRMDA-208ENST00000496424 KCNG1Q9UIX4 513 aa8.9□□□□□ -0.98
LRMDA-208ENST00000496424 SETQ01105 290 aaPredicted RBP8.89□□□□□ -0.99
LRMDA-208ENST00000496424 FAM13BQ9NYF5 915 aa8.89□□□□□ -0.99
LRMDA-208ENST00000496424 TNNT3P45378 269 aaPredicted RBP8.89□□□□□ -0.99
LRMDA-208ENST00000496424 FAM43BQ6ZT52 329 aaPredicted RBP8.89□□□□□ -0.99
LRMDA-208ENST00000496424 MYCNP04198 464 aaPredicted RBP8.88□□□□□ -0.99
LRMDA-208ENST00000496424 FOXD1Q16676 465 aa8.87□□□□□ -0.99
LRMDA-208ENST00000496424 ANAPC15P60006 121 aa8.87□□□□□ -0.99
LRMDA-208ENST00000496424 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
LRMDA-208ENST00000496424 TMEM51Q9NW97 253 aa8.87□□□□□ -0.99
LRMDA-208ENST00000496424 VGFO15240 615 aaPredicted RBP8.87□□□□□ -0.99
LRMDA-208ENST00000496424 KIF20AO95235 890 aa8.87□□□□□ -0.99
LRMDA-208ENST00000496424 CLCN1P35523 988 aa8.87□□□□□ -0.99
LRMDA-208ENST00000496424 PUS7Q96PZ0 661 aaKnown RBP8.86□□□□□ -0.99
LRMDA-208ENST00000496424 DNAJC2Q99543 621 aaKnown RBP8.86□□□□□ -0.99
LRMDA-208ENST00000496424 P3H3Q8IVL6 736 aa8.85□□□□□ -0.99
LRMDA-208ENST00000496424 RRAGDQ9NQL2 400 aaPredicted RBP8.85□□□□□ -0.99
LRMDA-208ENST00000496424 TRIM52Q96A61 297 aa8.85□□□□□ -0.99
LRMDA-208ENST00000496424 RALBP1Q15311 655 aa8.84□□□□□ -0.99
LRMDA-208ENST00000496424 UTP14CQ5TAP6 766 aaKnown RBP8.84□□□□□ -0.99
LRMDA-208ENST00000496424 LETM1O95202 739 aaPredicted RBP8.83□□□□□ -1
LRMDA-208ENST00000496424 CWC22Q9HCG8 908 aaKnown RBP8.83□□□□□ -1
LRMDA-208ENST00000496424 CGNQ9P2M7 1197 aaKnown RBP8.82□□□□□ -1
LRMDA-208ENST00000496424 FAM9BQ8IZU0 186 aa8.82□□□□□ -1
LRMDA-208ENST00000496424 GOLGA6L3A6NEY3 463 aa8.82□□□□□ -1
LRMDA-208ENST00000496424 NFKBIBQ15653 356 aa8.82□□□□□ -1
LRMDA-208ENST00000496424 CERS3Q8IU89 383 aa8.81□□□□□ -1
LRMDA-208ENST00000496424 PEG3Q9GZU2 1588 aa8.8□□□□□ -1
LRMDA-208ENST00000496424 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
LRMDA-208ENST00000496424 BANK1Q8NDB2 785 aa8.8□□□□□ -1
LRMDA-208ENST00000496424 GTPBP4Q9BZE4 634 aaKnown RBP8.8□□□□□ -1
LRMDA-208ENST00000496424 SSR1P43307 286 aaKnown RBP8.8□□□□□ -1
LRMDA-208ENST00000496424 B4GALNT3Q6L9W6 998 aa8.8□□□□□ -1
LRMDA-208ENST00000496424 LMOD3Q0VAK6 560 aa8.8□□□□□ -1
LRMDA-208ENST00000496424 DMTNQ08495 405 aa8.79□□□□□ -1
LRMDA-208ENST00000496424 ZNF771Q7L3S4 317 aaPredicted RBP8.78□□□□□ -1
LRMDA-208ENST00000496424 KIAA1211Q6ZU35 1233 aa8.78□□□□□ -1
LRMDA-208ENST00000496424 PPP6R1Q9UPN7 881 aa8.78□□□□□ -1
LRMDA-208ENST00000496424 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
LRMDA-208ENST00000496424 CALRP27797 417 aaKnown RBP8.77□□□□□ -1
LRMDA-208ENST00000496424 HSP90AB3PQ58FF7 597 aa8.77□□□□□ -1.01
LRMDA-208ENST00000496424 GOLIM4O00461 696 aa8.76□□□□□ -1.01
LRMDA-208ENST00000496424 CCDC66A2RUB6 948 aa8.76□□□□□ -1.01
LRMDA-208ENST00000496424 CECR2Q9BXF3 1484 aa8.76□□□□□ -1.01
LRMDA-208ENST00000496424 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.75□□□□□ -1.01
LRMDA-208ENST00000496424 TSPYL1Q9H0U9 437 aa8.75□□□□□ -1.01
LRMDA-208ENST00000496424 ARID4AP29374 1257 aaPredicted RBP8.75□□□□□ -1.01
LRMDA-208ENST00000496424 MYH16Q9H6N6 1097 aa8.75□□□□□ -1.01
LRMDA-208ENST00000496424 TCERG1O14776 1098 aaKnown RBP8.75□□□□□ -1.01
LRMDA-208ENST00000496424 SMARCA4P51532 1647 aa8.75□□□□□ -1.01
LRMDA-208ENST00000496424 MSNP26038 577 aaKnown RBP8.74□□□□□ -1.01
LRMDA-208ENST00000496424 KCNJ4P48050 445 aa8.74□□□□□ -1.01
LRMDA-208ENST00000496424 ESPNB1AK53 854 aa8.74□□□□□ -1.01
LRMDA-208ENST00000496424 CEP120Q8N960 986 aa8.74□□□□□ -1.01
LRMDA-208ENST00000496424 PRDM16Q9HAZ2 1276 aa8.74□□□□□ -1.01
LRMDA-208ENST00000496424 ZBTB12Q9Y330 459 aaPredicted RBP8.73□□□□□ -1.01
LRMDA-208ENST00000496424 ZBTB7CA1YPR0 619 aa8.73□□□□□ -1.01
LRMDA-208ENST00000496424 MMP14P50281 582 aa8.73□□□□□ -1.01
LRMDA-208ENST00000496424 DCAF11Q8TEB1 546 aa8.73□□□□□ -1.01
LRMDA-208ENST00000496424 ANP32CO43423 234 aa8.73□□□□□ -1.01
LRMDA-208ENST00000496424 CASC1Q6TDU7 716 aa8.72□□□□□ -1.01
LRMDA-208ENST00000496424 MROH2BQ7Z745 1585 aa8.72□□□□□ -1.01
LRMDA-208ENST00000496424 HNRNPUQ00839 825 aaKnown RBP eCLIP8.7□□□□□ -1.02
LRMDA-208ENST00000496424 MPNDQ8N594 471 aa8.69□□□□□ -1.02
LRMDA-208ENST00000496424 BAZ1AQ9NRL2 1556 aaPredicted RBP8.69□□□□□ -1.02
LRMDA-208ENST00000496424 PLEKHD1A6NEE1 506 aa8.69□□□□□ -1.02
LRMDA-208ENST00000496424 SLC52A1Q9NWF4 448 aa8.69□□□□□ -1.02
LRMDA-208ENST00000496424 EIF4G1Q04637 1599 aaKnown RBP8.68□□□□□ -1.02
LRMDA-208ENST00000496424 TRIM6-TRIM34B2RNG4 842 aa8.68□□□□□ -1.02
LRMDA-208ENST00000496424 NBPF20Q3BBV1 942 aa8.68□□□□□ -1.02
LRMDA-208ENST00000496424 NGEFQ8N5V2 710 aa8.68□□□□□ -1.02
LRMDA-208ENST00000496424 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
LRMDA-208ENST00000496424 RBM28Q9NW13 759 aaKnown RBP8.68□□□□□ -1.02
LRMDA-208ENST00000496424 BAZ1BQ9UIG0 1483 aaKnown RBP8.68□□□□□ -1.02
LRMDA-208ENST00000496424 TMC1Q8TDI8 760 aa8.68□□□□□ -1.02
LRMDA-208ENST00000496424 TTC36A6NLP5 189 aa8.67□□□□□ -1.02
LRMDA-208ENST00000496424 GEMIN8Q9NWZ8 242 aaKnown RBP8.67□□□□□ -1.02
LRMDA-208ENST00000496424 RSF1Q96T23 1441 aaPredicted RBP8.67□□□□□ -1.02
LRMDA-208ENST00000496424 UPF2Q9HAU5 1272 aaKnown RBP8.67□□□□□ -1.02
LRMDA-208ENST00000496424 MRVI1Q9Y6F6 885 aa8.67□□□□□ -1.02
LRMDA-208ENST00000496424 CCDC94Q9BW85 323 aaPredicted RBP8.67□□□□□ -1.02
LRMDA-208ENST00000496424 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
LRMDA-208ENST00000496424 CHMP4CQ96CF2 233 aa8.66□□□□□ -1.02
LRMDA-208ENST00000496424 WIZO95785 1651 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms