RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 FAM205CA6NFA0 338 aa13.86□□□□□ -0.19
SRRM1-219ENST00000495561 HS3ST6Q96QI5 342 aa13.86□□□□□ -0.19
SRRM1-219ENST00000495561 HOXB1P14653 301 aaPredicted RBP13.84□□□□□ -0.19
SRRM1-219ENST00000495561 RIMBP2O15034 1052 aa13.8□□□□□ -0.2
SRRM1-219ENST00000495561 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
SRRM1-219ENST00000495561 KRTAP3-3Q9BYR6 98 aa13.75□□□□□ -0.21
SRRM1-219ENST00000495561 KRTAP3-2Q9BYR7 98 aa13.75□□□□□ -0.21
SRRM1-219ENST00000495561 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
SRRM1-219ENST00000495561 ERBB3P21860 1342 aa13.72□□□□□ -0.21
SRRM1-219ENST00000495561 GPR153Q6NV75 609 aa13.72□□□□□ -0.21
SRRM1-219ENST00000495561 KIF3CO14782 793 aa13.71□□□□□ -0.21
SRRM1-219ENST00000495561 HS6ST3Q8IZP7 471 aa13.71□□□□□ -0.21
SRRM1-219ENST00000495561 PPP1R37O75864 691 aa13.7□□□□□ -0.22
SRRM1-219ENST00000495561 C2orf72A6NCS6 295 aa13.69□□□□□ -0.22
SRRM1-219ENST00000495561 MMRN1Q13201 1228 aa13.69□□□□□ -0.22
SRRM1-219ENST00000495561 ARSIQ5FYB1 569 aa13.66□□□□□ -0.22
SRRM1-219ENST00000495561 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
SRRM1-219ENST00000495561 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
SRRM1-219ENST00000495561 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRRM1-219ENST00000495561 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
SRRM1-219ENST00000495561 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
SRRM1-219ENST00000495561 ZNF687Q8N1G0 1237 aa13.55□□□□□ -0.24
SRRM1-219ENST00000495561 DNAJC5Q9H3Z4 198 aa13.55□□□□□ -0.24
SRRM1-219ENST00000495561 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
SRRM1-219ENST00000495561 SLC34A2O95436 690 aa13.53□□□□□ -0.24
SRRM1-219ENST00000495561 PCDHGA4Q9Y5G9 962 aa13.51□□□□□ -0.25
SRRM1-219ENST00000495561 NUDT7P0C024 238 aa13.5□□□□□ -0.25
SRRM1-219ENST00000495561 GPHNQ9NQX3 736 aaPredicted RBP13.45□□□□□ -0.26
SRRM1-219ENST00000495561 FOXK1P85037 733 aa13.44□□□□□ -0.26
SRRM1-219ENST00000495561 LHX6Q9UPM6 363 aa13.43□□□□□ -0.26
SRRM1-219ENST00000495561 PLPP6Q8IY26 295 aa13.42□□□□□ -0.26
SRRM1-219ENST00000495561 RYDENQ9NUL5 291 aaKnown RBP13.42□□□□□ -0.26
SRRM1-219ENST00000495561 DSG2Q14126 1118 aa13.41□□□□□ -0.26
SRRM1-219ENST00000495561 PTCD2Q8WV60 388 aaKnown RBP13.39□□□□□ -0.27
SRRM1-219ENST00000495561 KDM4FA0A1W2PPD8 638 aa13.36□□□□□ -0.27
SRRM1-219ENST00000495561 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
SRRM1-219ENST00000495561 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
SRRM1-219ENST00000495561 RNF166Q96A37 237 aaPredicted RBP13.34□□□□□ -0.27
SRRM1-219ENST00000495561 MYT1LQ9UL68 1186 aa13.34□□□□□ -0.27
SRRM1-219ENST00000495561 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
SRRM1-219ENST00000495561 DCAF8L2P0C7V8 631 aa13.33□□□□□ -0.28
SRRM1-219ENST00000495561 PBX2P40425 430 aa13.33□□□□□ -0.28
SRRM1-219ENST00000495561 POTEEQ6S8J3 1075 aa13.33□□□□□ -0.28
SRRM1-219ENST00000495561 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
SRRM1-219ENST00000495561 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
SRRM1-219ENST00000495561 PTGER2P43116 358 aa13.29□□□□□ -0.28
SRRM1-219ENST00000495561 PSDA5PKW4 1024 aaPredicted RBP13.28□□□□□ -0.28
SRRM1-219ENST00000495561 TBC1D12O60347 775 aa13.27□□□□□ -0.29
SRRM1-219ENST00000495561 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
SRRM1-219ENST00000495561 PPP1R15BQ5SWA1 713 aa13.25□□□□□ -0.29
SRRM1-219ENST00000495561 OXER1Q8TDS5 423 aa13.25□□□□□ -0.29
SRRM1-219ENST00000495561 PDE4AP27815 886 aa13.23□□□□□ -0.29
SRRM1-219ENST00000495561 UPF1Q92900 1129 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRRM1-219ENST00000495561 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
SRRM1-219ENST00000495561 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
SRRM1-219ENST00000495561 LARP6Q9BRS8 491 aaKnown RBP13.17□□□□□ -0.3
SRRM1-219ENST00000495561 PSEN2P49810 448 aa13.16□□□□□ -0.3
SRRM1-219ENST00000495561 DMRTA1Q5VZB9 504 aa13.15□□□□□ -0.3
SRRM1-219ENST00000495561 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
SRRM1-219ENST00000495561 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
SRRM1-219ENST00000495561 MFSD10Q14728 455 aa13.13□□□□□ -0.31
SRRM1-219ENST00000495561 CADPS2Q86UW7 1296 aa13.11□□□□□ -0.31
SRRM1-219ENST00000495561 TK2O00142 265 aa13.1□□□□□ -0.31
SRRM1-219ENST00000495561 ZNF454Q8N9F8 522 aa13.09□□□□□ -0.31
SRRM1-219ENST00000495561 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
SRRM1-219ENST00000495561 ANO8Q9HCE9 1232 aaPredicted RBP13.07□□□□□ -0.32
SRRM1-219ENST00000495561 HRO43593 1189 aa13.06□□□□□ -0.32
SRRM1-219ENST00000495561 EVI5O60447 810 aa13.06□□□□□ -0.32
SRRM1-219ENST00000495561 FOSBP53539 338 aa13.06□□□□□ -0.32
SRRM1-219ENST00000495561 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
SRRM1-219ENST00000495561 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
SRRM1-219ENST00000495561 EMILIN3Q9NT22 766 aa13.04□□□□□ -0.32
SRRM1-219ENST00000495561 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
SRRM1-219ENST00000495561 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.33
SRRM1-219ENST00000495561 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
SRRM1-219ENST00000495561 VPS9D1Q9Y2B5 631 aa12.98□□□□□ -0.33
SRRM1-219ENST00000495561 PTPREP23469 700 aa12.96□□□□□ -0.33
SRRM1-219ENST00000495561 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.33
SRRM1-219ENST00000495561 HCSTQ9UBK5 93 aa12.96□□□□□ -0.33
SRRM1-219ENST00000495561 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
SRRM1-219ENST00000495561 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
SRRM1-219ENST00000495561 STAC3Q96MF2 364 aa12.94□□□□□ -0.34
SRRM1-219ENST00000495561 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
SRRM1-219ENST00000495561 CAMK2BQ13554 666 aa12.93□□□□□ -0.34
SRRM1-219ENST00000495561 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
SRRM1-219ENST00000495561 ZBED2Q9BTP6 218 aa12.91□□□□□ -0.34
SRRM1-219ENST00000495561 RTN4Q9NQC3 1192 aaKnown RBP12.91□□□□□ -0.34
SRRM1-219ENST00000495561 PCDHGA10Q9Y5H3 936 aa12.9□□□□□ -0.34
SRRM1-219ENST00000495561 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
SRRM1-219ENST00000495561 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
SRRM1-219ENST00000495561 DPYSL4O14531 572 aa12.86□□□□□ -0.35
SRRM1-219ENST00000495561 PHF14O94880 888 aa12.85□□□□□ -0.35
SRRM1-219ENST00000495561 PLA2G2EQ9NZK7 142 aa12.85□□□□□ -0.35
SRRM1-219ENST00000495561 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
SRRM1-219ENST00000495561 TYW1BQ6NUM6 668 aa12.84□□□□□ -0.35
SRRM1-219ENST00000495561 PPP1R3GB7ZBB8 358 aa12.82□□□□□ -0.36
SRRM1-219ENST00000495561 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
SRRM1-219ENST00000495561 COL9A1P20849 921 aa12.8□□□□□ -0.36
SRRM1-219ENST00000495561 MRPL50Q8N5N7 158 aaKnown RBP12.79□□□□□ -0.36
SRRM1-219ENST00000495561 PTPN5P54829 565 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms