RNA–Protein interactions for RNA: ENST00000495228.1

DUBR-205, DPPA2 upstream binding RNA, humanhuman

TSL 2 BASIC

Gene DUBR, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-205ENST00000495228 TTBK1Q5TCY1 1321 aaPredicted RBP9.6□□□□□ -0.87
DUBR-205ENST00000495228 THOC2Q8NI27 1593 aaKnown RBP9.59□□□□□ -0.87
DUBR-205ENST00000495228 SNPHO15079 494 aa9.59□□□□□ -0.87
DUBR-205ENST00000495228 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.59□□□□□ -0.87
DUBR-205ENST00000495228 CADPSQ9ULU8 1353 aa9.59□□□□□ -0.87
DUBR-205ENST00000495228 WIZO95785 1651 aa9.58□□□□□ -0.88
DUBR-205ENST00000495228 KIF21AQ7Z4S6 1674 aa9.58□□□□□ -0.88
DUBR-205ENST00000495228 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
DUBR-205ENST00000495228 PCDHB8Q9UN66 801 aa9.56□□□□□ -0.88
DUBR-205ENST00000495228 PYGBP11216 843 aa9.55□□□□□ -0.88
DUBR-205ENST00000495228 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
DUBR-205ENST00000495228 MYT1Q01538 1121 aa9.52□□□□□ -0.89
DUBR-205ENST00000495228 NBR1Q14596 966 aa9.52□□□□□ -0.89
DUBR-205ENST00000495228 DCAF8Q5TAQ9 597 aa9.52□□□□□ -0.89
DUBR-205ENST00000495228 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
DUBR-205ENST00000495228 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
DUBR-205ENST00000495228 MRC2Q9UBG0 1479 aa9.49□□□□□ -0.89
DUBR-205ENST00000495228 POTEB3A0JP26 581 aa9.49□□□□□ -0.89
DUBR-205ENST00000495228 EMP3P54852 163 aa9.49□□□□□ -0.89
DUBR-205ENST00000495228 POTEBQ6S5H4 581 aa9.49□□□□□ -0.89
DUBR-205ENST00000495228 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
DUBR-205ENST00000495228 KRTAP3-3Q9BYR6 98 aa9.48□□□□□ -0.89
DUBR-205ENST00000495228 KRTAP3-2Q9BYR7 98 aa9.48□□□□□ -0.89
DUBR-205ENST00000495228 WDR62O43379 1518 aa9.47□□□□□ -0.89
DUBR-205ENST00000495228 NPM2Q86SE8 214 aaKnown RBP9.47□□□□□ -0.89
DUBR-205ENST00000495228 CFTRP13569 1480 aa9.47□□□□□ -0.89
DUBR-205ENST00000495228 C3orf67Q6ZVT6 689 aa9.46□□□□□ -0.9
DUBR-205ENST00000495228 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.9
DUBR-205ENST00000495228 CEP164Q9UPV0 1460 aa9.45□□□□□ -0.9
DUBR-205ENST00000495228 KLHL34Q8N239 644 aa9.44□□□□□ -0.9
DUBR-205ENST00000495228 HS3ST6Q96QI5 342 aa9.44□□□□□ -0.9
DUBR-205ENST00000495228 FANCD2Q9BXW9 1451 aa9.44□□□□□ -0.9
DUBR-205ENST00000495228 TOP2AP11388 1531 aaKnown RBP9.44□□□□□ -0.9
DUBR-205ENST00000495228 L3MBTL3Q96JM7 780 aaPredicted RBP9.43□□□□□ -0.9
DUBR-205ENST00000495228 FAM205CA6NFA0 338 aa9.42□□□□□ -0.9
DUBR-205ENST00000495228 CFAP44Q96MT7 982 aa9.42□□□□□ -0.9
DUBR-205ENST00000495228 PRDM2Q13029 1718 aa9.4□□□□□ -0.9
DUBR-205ENST00000495228 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
DUBR-205ENST00000495228 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
DUBR-205ENST00000495228 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
DUBR-205ENST00000495228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.39□□□□□ -0.91
DUBR-205ENST00000495228 PKD2Q13563 968 aa9.37□□□□□ -0.91
DUBR-205ENST00000495228 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
DUBR-205ENST00000495228 ILDR1Q86SU0 546 aaPredicted RBP9.36□□□□□ -0.91
DUBR-205ENST00000495228 URB2Q14146 1524 aaKnown RBP9.36□□□□□ -0.91
DUBR-205ENST00000495228 TSHZ2Q9NRE2 1034 aa9.35□□□□□ -0.91
DUBR-205ENST00000495228 PSEN1P49768 467 aa9.34□□□□□ -0.91
DUBR-205ENST00000495228 SUPT5HO00267 1087 aaKnown RBP9.33□□□□□ -0.92
DUBR-205ENST00000495228 CHRM1P11229 460 aaPredicted RBP9.33□□□□□ -0.92
DUBR-205ENST00000495228 HOXB3P14651 431 aaPredicted RBP9.33□□□□□ -0.92
DUBR-205ENST00000495228 GSE1Q14687 1217 aa9.33□□□□□ -0.92
DUBR-205ENST00000495228 DPY19L2Q6NUT2 758 aa9.33□□□□□ -0.92
DUBR-205ENST00000495228 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
DUBR-205ENST00000495228 SPRYD3Q8NCJ5 442 aa9.31□□□□□ -0.92
DUBR-205ENST00000495228 ABCC8Q09428 1581 aa9.31□□□□□ -0.92
DUBR-205ENST00000495228 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
DUBR-205ENST00000495228 TRIM26Q12899 539 aaPredicted RBP9.29□□□□□ -0.92
DUBR-205ENST00000495228 IFT140Q96RY7 1462 aa9.28□□□□□ -0.92
DUBR-205ENST00000495228 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
DUBR-205ENST00000495228 TOPBP1Q92547 1522 aa9.26□□□□□ -0.93
DUBR-205ENST00000495228 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
DUBR-205ENST00000495228 PDAP1Q13442 181 aaKnown RBP9.25□□□□□ -0.93
DUBR-205ENST00000495228 ZNF608Q9ULD9 1512 aaPredicted RBP9.24□□□□□ -0.93
DUBR-205ENST00000495228 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
DUBR-205ENST00000495228 IFNLR1Q8IU57 520 aaPredicted RBP9.23□□□□□ -0.93
DUBR-205ENST00000495228 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
DUBR-205ENST00000495228 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
DUBR-205ENST00000495228 ERBB3P21860 1342 aa9.22□□□□□ -0.93
DUBR-205ENST00000495228 G3V3G9 751 aa9.21□□□□□ -0.94
DUBR-205ENST00000495228 UBTFP17480 764 aaKnown RBP9.21□□□□□ -0.94
DUBR-205ENST00000495228 RNF166Q96A37 237 aaPredicted RBP9.21□□□□□ -0.94
DUBR-205ENST00000495228 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
DUBR-205ENST00000495228 TARBP1Q13395 1621 aaKnown RBP9.2□□□□□ -0.94
DUBR-205ENST00000495228 RIMBP3CA6NJZ7 1639 aa9.18□□□□□ -0.94
DUBR-205ENST00000495228 RIMBP3BA6NNM3 1639 aa9.18□□□□□ -0.94
DUBR-205ENST00000495228 EIF4G3O43432 1585 aaKnown RBP9.18□□□□□ -0.94
DUBR-205ENST00000495228 RIMBP3Q9UFD9 1639 aa9.18□□□□□ -0.94
DUBR-205ENST00000495228 AQRO60306 1485 aaKnown RBP eCLIP9.17□□□□□ -0.94
DUBR-205ENST00000495228 POLA1P09884 1462 aaPredicted RBP9.16□□□□□ -0.94
DUBR-205ENST00000495228 SOGA1O94964 1423 aa9.16□□□□□ -0.94
DUBR-205ENST00000495228 HRCP23327 699 aa9.16□□□□□ -0.94
DUBR-205ENST00000495228 VARS2Q5ST30 1063 aaKnown RBP9.16□□□□□ -0.94
DUBR-205ENST00000495228 CHD1O14646 1710 aa9.15□□□□□ -0.94
DUBR-205ENST00000495228 MYT1LQ9UL68 1186 aa9.15□□□□□ -0.94
DUBR-205ENST00000495228 WDR97A6NE52 1622 aa9.13□□□□□ -0.95
DUBR-205ENST00000495228 ARHGEF11O15085 1522 aa9.13□□□□□ -0.95
DUBR-205ENST00000495228 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
DUBR-205ENST00000495228 RIMBP2O15034 1052 aa9.12□□□□□ -0.95
DUBR-205ENST00000495228 ECM2O94769 699 aaPredicted RBP9.12□□□□□ -0.95
DUBR-205ENST00000495228 TDRD9Q8NDG6 1382 aaKnown RBP9.12□□□□□ -0.95
DUBR-205ENST00000495228 CYB5RLQ6IPT4 315 aa9.11□□□□□ -0.95
DUBR-205ENST00000495228 TMEM92Q6UXU6 159 aa9.11□□□□□ -0.95
DUBR-205ENST00000495228 FGD5Q6ZNL6 1462 aa9.1□□□□□ -0.95
DUBR-205ENST00000495228 ZNF687Q8N1G0 1237 aa9.1□□□□□ -0.95
DUBR-205ENST00000495228 CUX1P39880 1505 aa9.1□□□□□ -0.95
DUBR-205ENST00000495228 EFCAB3Q8N7B9 438 aa9.09□□□□□ -0.95
DUBR-205ENST00000495228 CIZ1Q9ULV3 898 aaPredicted RBP9.09□□□□□ -0.95
DUBR-205ENST00000495228 CHMP7Q8WUX9 453 aaPredicted RBP9.08□□□□□ -0.96
DUBR-205ENST00000495228 ZSWIM6Q9HCJ5 1215 aa9.08□□□□□ -0.96
DUBR-205ENST00000495228 GPR153Q6NV75 609 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms