RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 KDM5BQ9UGL1 1544 aa17.05■□□□□ 0.32
HDLBP-245ENST00000494862 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
HDLBP-245ENST00000494862 ITSN2Q9NZM3 1697 aa17.04■□□□□ 0.32
HDLBP-245ENST00000494862 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
HDLBP-245ENST00000494862 CFDP1Q9UEE9 299 aaPredicted RBP17.04■□□□□ 0.32
HDLBP-245ENST00000494862 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
HDLBP-245ENST00000494862 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
HDLBP-245ENST00000494862 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
HDLBP-245ENST00000494862 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
HDLBP-245ENST00000494862 AKNAQ7Z591 1439 aa17■□□□□ 0.31
HDLBP-245ENST00000494862 ZCCHC11Q5TAX3 1644 aaKnown RBP16.99■□□□□ 0.31
HDLBP-245ENST00000494862 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
HDLBP-245ENST00000494862 ZNF644Q9H582 1327 aaPredicted RBP16.98■□□□□ 0.31
HDLBP-245ENST00000494862 DAPK1P53355 1430 aa16.98■□□□□ 0.31
HDLBP-245ENST00000494862 ABCC5O15440 1437 aa16.97■□□□□ 0.31
HDLBP-245ENST00000494862 NAIPQ13075 1403 aa16.97■□□□□ 0.31
HDLBP-245ENST00000494862 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.31
HDLBP-245ENST00000494862 CDC42BPAQ5VT25 1732 aa16.96■□□□□ 0.3
HDLBP-245ENST00000494862 ROCK1Q13464 1354 aa16.95■□□□□ 0.3
HDLBP-245ENST00000494862 CHIC2Q9UKJ5 165 aa16.94■□□□□ 0.3
HDLBP-245ENST00000494862 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-245ENST00000494862 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
HDLBP-245ENST00000494862 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
HDLBP-245ENST00000494862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.92■□□□□ 0.3
HDLBP-245ENST00000494862 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
HDLBP-245ENST00000494862 PREX2Q70Z35 1606 aa16.91■□□□□ 0.3
HDLBP-245ENST00000494862 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
HDLBP-245ENST00000494862 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
HDLBP-245ENST00000494862 TTC37Q6PGP7 1564 aa16.89■□□□□ 0.3
HDLBP-245ENST00000494862 GCC2Q8IWJ2 1684 aa16.89■□□□□ 0.29
HDLBP-245ENST00000494862 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
HDLBP-245ENST00000494862 WDR7Q9Y4E6 1490 aa16.88■□□□□ 0.29
HDLBP-245ENST00000494862 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
HDLBP-245ENST00000494862 ADGRL2O95490 1459 aa16.86■□□□□ 0.29
HDLBP-245ENST00000494862 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDLBP-245ENST00000494862 RSPH4AQ5TD94 716 aa16.86■□□□□ 0.29
HDLBP-245ENST00000494862 CDC42BPBQ9Y5S2 1711 aa16.86■□□□□ 0.29
HDLBP-245ENST00000494862 PLCH2O75038 1416 aa16.86■□□□□ 0.29
HDLBP-245ENST00000494862 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
HDLBP-245ENST00000494862 MAPKBP1O60336 1514 aa16.86■□□□□ 0.29
HDLBP-245ENST00000494862 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
HDLBP-245ENST00000494862 PLEKHH2Q8IVE3 1493 aa16.85■□□□□ 0.29
HDLBP-245ENST00000494862 ARHGAP5Q13017 1502 aa16.85■□□□□ 0.29
HDLBP-245ENST00000494862 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
HDLBP-245ENST00000494862 MBD5Q9P267 1494 aa16.84■□□□□ 0.29
HDLBP-245ENST00000494862 CROCC2H7BZ55 1655 aa16.83■□□□□ 0.28
HDLBP-245ENST00000494862 NCOA1Q15788 1441 aa16.83■□□□□ 0.28
HDLBP-245ENST00000494862 ASXL2Q76L83 1435 aa16.83■□□□□ 0.28
HDLBP-245ENST00000494862 ANKRD30AQ9BXX3 1397 aa16.83■□□□□ 0.28
HDLBP-245ENST00000494862 MYO5CQ9NQX4 1742 aa16.83■□□□□ 0.28
HDLBP-245ENST00000494862 KIAA1107Q9UPP5 1409 aa16.83■□□□□ 0.28
HDLBP-245ENST00000494862 TSPY4P0CV99 314 aa16.82■□□□□ 0.28
HDLBP-245ENST00000494862 TSPY10P0CW01 314 aa16.82■□□□□ 0.28
HDLBP-245ENST00000494862 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
HDLBP-245ENST00000494862 EFCAB2Q5VUJ9 269 aa16.82■□□□□ 0.28
HDLBP-245ENST00000494862 ADGBQ8N7X0 1667 aa16.81■□□□□ 0.28
HDLBP-245ENST00000494862 ARAP3Q8WWN8 1544 aa16.81■□□□□ 0.28
HDLBP-245ENST00000494862 C9orf84Q5VXU9 1444 aa16.81■□□□□ 0.28
HDLBP-245ENST00000494862 CCDC141Q6ZP82 1450 aa16.8■□□□□ 0.28
HDLBP-245ENST00000494862 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
HDLBP-245ENST00000494862 KDM6BO15054 1643 aa16.78■□□□□ 0.28
HDLBP-245ENST00000494862 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
HDLBP-245ENST00000494862 TRIM52Q96A61 297 aa16.77■□□□□ 0.28
HDLBP-245ENST00000494862 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.27
HDLBP-245ENST00000494862 SYCP2Q9BX26 1530 aa16.76■□□□□ 0.27
HDLBP-245ENST00000494862 MAST1Q9Y2H9 1570 aa16.74■□□□□ 0.27
HDLBP-245ENST00000494862 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
HDLBP-245ENST00000494862 ABCC1P33527 1531 aa16.73■□□□□ 0.27
HDLBP-245ENST00000494862 ANKRD50Q9ULJ7 1429 aa16.72■□□□□ 0.27
HDLBP-245ENST00000494862 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
HDLBP-245ENST00000494862 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
HDLBP-245ENST00000494862 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
HDLBP-245ENST00000494862 KIF15Q9NS87 1388 aa16.71■□□□□ 0.27
HDLBP-245ENST00000494862 FANCAO15360 1455 aa16.68■□□□□ 0.26
HDLBP-245ENST00000494862 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
HDLBP-245ENST00000494862 NEUROD1Q13562 356 aa16.68■□□□□ 0.26
HDLBP-245ENST00000494862 TRAPPC8Q9Y2L5 1435 aa16.67■□□□□ 0.26
HDLBP-245ENST00000494862 PLXNC1O60486 1568 aa16.65■□□□□ 0.26
HDLBP-245ENST00000494862 CD109Q6YHK3 1445 aa16.65■□□□□ 0.26
HDLBP-245ENST00000494862 PZPP20742 1482 aa16.65■□□□□ 0.26
HDLBP-245ENST00000494862 RTEL1-TNFRSF6BF6WH68 1400 aa16.64■□□□□ 0.25
HDLBP-245ENST00000494862 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
HDLBP-245ENST00000494862 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
HDLBP-245ENST00000494862 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
HDLBP-245ENST00000494862 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
HDLBP-245ENST00000494862 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
HDLBP-245ENST00000494862 KDM5DQ9BY66 1539 aa16.61■□□□□ 0.25
HDLBP-245ENST00000494862 DUOX2Q9NRD8 1548 aa16.61■□□□□ 0.25
HDLBP-245ENST00000494862 AFAP1Q8N556 730 aa16.6■□□□□ 0.25
HDLBP-245ENST00000494862 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
HDLBP-245ENST00000494862 NUP155O75694 1391 aa16.6■□□□□ 0.25
HDLBP-245ENST00000494862 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
HDLBP-245ENST00000494862 CFAP74Q9C0B2 1584 aa16.6■□□□□ 0.25
HDLBP-245ENST00000494862 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
HDLBP-245ENST00000494862 ERBINQ96RT1 1412 aa16.58■□□□□ 0.24
HDLBP-245ENST00000494862 GLI2P10070 1586 aa16.58■□□□□ 0.24
HDLBP-245ENST00000494862 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
HDLBP-245ENST00000494862 ZFYVE16Q7Z3T8 1539 aa16.56■□□□□ 0.24
HDLBP-245ENST00000494862 NEO1Q92859 1461 aa16.56■□□□□ 0.24
HDLBP-245ENST00000494862 PKD2Q13563 968 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms