RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 TIAM1Q13009 1591 aa32.9■■■□□ 2.86
CCDC12-207ENST00000494655 CDC42BPAQ5VT25 1732 aa32.9■■■□□ 2.86
CCDC12-207ENST00000494655 CDC42BPBQ9Y5S2 1711 aa32.9■■■□□ 2.86
CCDC12-207ENST00000494655 RAPGEF3O95398 923 aa32.86■■■□□ 2.85
CCDC12-207ENST00000494655 SCAPERQ9BY12 1400 aa32.82■■■□□ 2.84
CCDC12-207ENST00000494655 SUPT6HQ7KZ85 1726 aaKnown RBP32.82■■■□□ 2.84
CCDC12-207ENST00000494655 ITSN2Q9NZM3 1697 aa32.82■■■□□ 2.84
CCDC12-207ENST00000494655 POGZQ7Z3K3 1410 aa32.81■■■□□ 2.84
CCDC12-207ENST00000494655 ZMYM4Q5VZL5 1548 aa32.81■■■□□ 2.84
CCDC12-207ENST00000494655 CCNB3Q8WWL7 1395 aa32.8■■■□□ 2.84
CCDC12-207ENST00000494655 ARHGEF40Q8TER5 1519 aa32.78■■■□□ 2.84
CCDC12-207ENST00000494655 AEBP2Q6ZN18 517 aaPredicted RBP32.78■■■□□ 2.84
CCDC12-207ENST00000494655 MAP3K1Q13233 1512 aa32.77■■■□□ 2.84
CCDC12-207ENST00000494655 ABCC1P33527 1531 aa32.76■■■□□ 2.83
CCDC12-207ENST00000494655 ZNF518AQ6AHZ1 1483 aa32.75■■■□□ 2.83
CCDC12-207ENST00000494655 GPATCH8Q9UKJ3 1502 aaKnown RBP32.75■■■□□ 2.83
CCDC12-207ENST00000494655 MAGI2Q86UL8 1455 aa32.73■■■□□ 2.83
CCDC12-207ENST00000494655 ZFYVE16Q7Z3T8 1539 aa32.72■■■□□ 2.83
CCDC12-207ENST00000494655 APLP2Q06481 763 aa32.72■■■□□ 2.83
CCDC12-207ENST00000494655 LRRC9Q6ZRR7 1453 aa32.71■■■□□ 2.83
CCDC12-207ENST00000494655 SAMD9LQ8IVG5 1584 aa32.68■■■□□ 2.82
CCDC12-207ENST00000494655 NCOA2Q15596 1464 aa32.67■■■□□ 2.82
CCDC12-207ENST00000494655 CFDP1Q9UEE9 299 aaPredicted RBP32.67■■■□□ 2.82
CCDC12-207ENST00000494655 PLEKHH2Q8IVE3 1493 aa32.67■■■□□ 2.82
CCDC12-207ENST00000494655 KDM5CP41229 1560 aa32.66■■■□□ 2.82
CCDC12-207ENST00000494655 ZNF777Q9ULD5 760 aaPredicted RBP32.66■■■□□ 2.82
CCDC12-207ENST00000494655 HECW2Q9P2P5 1572 aa32.64■■■□□ 2.82
CCDC12-207ENST00000494655 SYCP2Q9BX26 1530 aa32.61■■■□□ 2.81
CCDC12-207ENST00000494655 KDM4FA0A1W2PPD8 638 aa32.58■■■□□ 2.81
CCDC12-207ENST00000494655 MYT1LQ9UL68 1186 aa32.58■■■□□ 2.81
CCDC12-207ENST00000494655 YEATS2Q9ULM3 1422 aa32.58■■■□□ 2.81
CCDC12-207ENST00000494655 ARHGEF12Q9NZN5 1544 aa32.56■■■□□ 2.8
CCDC12-207ENST00000494655 ARID4BQ4LE39 1312 aaPredicted RBP32.54■■■□□ 2.8
CCDC12-207ENST00000494655 KIAA1107Q9UPP5 1409 aa32.54■■■□□ 2.8
CCDC12-207ENST00000494655 TRAPPC8Q9Y2L5 1435 aa32.54■■■□□ 2.8
CCDC12-207ENST00000494655 AFAP1Q8N556 730 aa32.54■■■□□ 2.8
CCDC12-207ENST00000494655 MLH3Q9UHC1 1453 aa32.52■■■□□ 2.8
CCDC12-207ENST00000494655 C9orf84Q5VXU9 1444 aa32.51■■■□□ 2.79
CCDC12-207ENST00000494655 ATP10AO60312 1499 aa32.49■■■□□ 2.79
CCDC12-207ENST00000494655 BCORL1Q5H9F3 1711 aa32.49■■■□□ 2.79
CCDC12-207ENST00000494655 KANK4Q5T7N3 995 aaPredicted RBP32.49■■■□□ 2.79
CCDC12-207ENST00000494655 DIP2CQ9Y2E4 1556 aa32.48■■■□□ 2.79
CCDC12-207ENST00000494655 ABCA6Q8N139 1617 aa32.47■■■□□ 2.79
CCDC12-207ENST00000494655 CAMSAP2Q08AD1 1489 aa32.47■■■□□ 2.79
CCDC12-207ENST00000494655 HNRNPMP52272 730 aaKnown RBP eCLIP32.44■■■□□ 2.783e-6■■□□□ 12.2
CCDC12-207ENST00000494655 KIDINS220Q9ULH0 1771 aa32.43■■■□□ 2.78
CCDC12-207ENST00000494655 ADAMTSL3P82987 1691 aa32.43■■■□□ 2.78
CCDC12-207ENST00000494655 REREQ9P2R6 1566 aa32.42■■■□□ 2.78
CCDC12-207ENST00000494655 MYOM3Q5VTT5 1437 aa32.42■■■□□ 2.78
CCDC12-207ENST00000494655 INO80Q9ULG1 1556 aaPredicted RBP32.41■■■□□ 2.78
CCDC12-207ENST00000494655 SPAG9O60271 1321 aaKnown RBP32.41■■■□□ 2.78
CCDC12-207ENST00000494655 ATP7AQ04656 1500 aa32.41■■■□□ 2.78
CCDC12-207ENST00000494655 SIGLEC1Q9BZZ2 1709 aa32.4■■■□□ 2.78
CCDC12-207ENST00000494655 ZNF644Q9H582 1327 aaPredicted RBP32.38■■■□□ 2.77
CCDC12-207ENST00000494655 MIA2Q96PC5 1412 aa32.37■■■□□ 2.77
CCDC12-207ENST00000494655 MADDQ8WXG6 1647 aa32.37■■■□□ 2.77
CCDC12-207ENST00000494655 CCDC141Q6ZP82 1450 aa32.36■■■□□ 2.77
CCDC12-207ENST00000494655 MBD5Q9P267 1494 aa32.35■■■□□ 2.77
CCDC12-207ENST00000494655 ARHGEF5Q12774 1597 aa32.33■■■□□ 2.77
CCDC12-207ENST00000494655 FER1L4A9Z1Z3 1794 aa32.31■■■□□ 2.76
CCDC12-207ENST00000494655 RIMS1Q86UR5 1692 aaKnown RBP32.31■■■□□ 2.76
CCDC12-207ENST00000494655 RSPH4AQ5TD94 716 aa32.3■■■□□ 2.76
CCDC12-207ENST00000494655 ADGBQ8N7X0 1667 aa32.3■■■□□ 2.76
CCDC12-207ENST00000494655 AGLP35573 1532 aa32.27■■■□□ 2.76
CCDC12-207ENST00000494655 PTPN23Q9H3S7 1636 aa32.26■■■□□ 2.75
CCDC12-207ENST00000494655 MLECQ14165 292 aa32.25■■■□□ 2.75
CCDC12-207ENST00000494655 RTEL1-TNFRSF6BF6WH68 1400 aa32.25■■■□□ 2.75
CCDC12-207ENST00000494655 PTPRMP28827 1452 aa32.24■■■□□ 2.75
CCDC12-207ENST00000494655 FGD6Q6ZV73 1430 aa32.21■■■□□ 2.75
CCDC12-207ENST00000494655 A2MP01023 1474 aa32.21■■■□□ 2.75
CCDC12-207ENST00000494655 PLXNC1O60486 1568 aa32.19■■■□□ 2.74
CCDC12-207ENST00000494655 TSPY4P0CV99 314 aa32.19■■■□□ 2.74
CCDC12-207ENST00000494655 TSPY10P0CW01 314 aa32.19■■■□□ 2.74
CCDC12-207ENST00000494655 MAST1Q9Y2H9 1570 aa32.16■■■□□ 2.74
CCDC12-207ENST00000494655 CROCC2H7BZ55 1655 aa32.15■■■□□ 2.74
CCDC12-207ENST00000494655 TCOF1Q13428 1488 aaKnown RBP32.13■■■□□ 2.73
CCDC12-207ENST00000494655 ESF1Q9H501 851 aaKnown RBP32.12■■■□□ 2.73
CCDC12-207ENST00000494655 DNMT1P26358 1616 aaKnown RBP32.09■■■□□ 2.73
CCDC12-207ENST00000494655 SHANK2Q9UPX8 1470 aa32.08■■■□□ 2.73
CCDC12-207ENST00000494655 CNTLNQ9NXG0 1405 aa32.04■■■□□ 2.72
CCDC12-207ENST00000494655 DHX29Q7Z478 1369 aaKnown RBP32.04■■■□□ 2.72
CCDC12-207ENST00000494655 DAPK1P53355 1430 aa32.02■■■□□ 2.72
CCDC12-207ENST00000494655 PLPPR3Q6T4P5 718 aa32.01■■■□□ 2.71
CCDC12-207ENST00000494655 MROH2AA6NES4 1674 aa31.99■■■□□ 2.71
CCDC12-207ENST00000494655 ABCC5O15440 1437 aa31.99■■■□□ 2.71
CCDC12-207ENST00000494655 FAM50AQ14320 339 aaKnown RBP31.98■■■□□ 2.71
CCDC12-207ENST00000494655 EIF2AK4Q9P2K8 1649 aaKnown RBP31.97■■■□□ 2.71
CCDC12-207ENST00000494655 C3P01024 1663 aa31.96■■■□□ 2.71
CCDC12-207ENST00000494655 CLTCQ00610 1675 aaKnown RBP31.95■■■□□ 2.71
CCDC12-207ENST00000494655 GGT6Q6P531 493 aa31.94■■■□□ 2.7
CCDC12-207ENST00000494655 DUOX2Q9NRD8 1548 aa31.94■■■□□ 2.7
CCDC12-207ENST00000494655 FAM135AQ9P2D6 1515 aa31.92■■■□□ 2.7
CCDC12-207ENST00000494655 PPARGC1BQ86YN6 1023 aaKnown RBP31.92■■■□□ 2.7
CCDC12-207ENST00000494655 KIF3BO15066 747 aa31.91■■■□□ 2.7
CCDC12-207ENST00000494655 PREX1Q8TCU6 1659 aa31.89■■■□□ 2.7
CCDC12-207ENST00000494655 PPP6R1Q9UPN7 881 aa31.89■■■□□ 2.7
CCDC12-207ENST00000494655 KIF15Q9NS87 1388 aa31.89■■■□□ 2.7
CCDC12-207ENST00000494655 ANKRD30AQ9BXX3 1397 aa31.88■■■□□ 2.69
CCDC12-207ENST00000494655 RNF17Q9BXT8 1623 aaKnown RBP31.87■■■□□ 2.69
CCDC12-207ENST00000494655 KDM5DQ9BY66 1539 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms