RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 TMEM121BQ9BXQ6 578 aaPredicted RBP8.54□□□□□ -1.04
CMSS1-207ENST00000494412 G3V3G9 751 aa8.53□□□□□ -1.04
CMSS1-207ENST00000494412 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
CMSS1-207ENST00000494412 TULP1O00294 542 aaPredicted RBP8.52□□□□□ -1.05
CMSS1-207ENST00000494412 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
CMSS1-207ENST00000494412 OTUD5Q96G74 571 aa8.51□□□□□ -1.05
CMSS1-207ENST00000494412 CADPS2Q86UW7 1296 aa8.5□□□□□ -1.05
CMSS1-207ENST00000494412 GTF3C3Q9Y5Q9 886 aa8.5□□□□□ -1.05
CMSS1-207ENST00000494412 TMEM92Q6UXU6 159 aa8.49□□□□□ -1.05
CMSS1-207ENST00000494412 C3orf67Q6ZVT6 689 aa8.49□□□□□ -1.05
CMSS1-207ENST00000494412 WDR70Q9NW82 654 aa8.49□□□□□ -1.05
CMSS1-207ENST00000494412 SCUBE2Q9NQ36 999 aa8.48□□□□□ -1.05
CMSS1-207ENST00000494412 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.48□□□□□ -1.05
CMSS1-207ENST00000494412 MAMSTRQ6ZN01 415 aa8.46□□□□□ -1.06
CMSS1-207ENST00000494412 KCNV2Q8TDN2 545 aa8.45□□□□□ -1.06
CMSS1-207ENST00000494412 SLAIN1Q8ND83 568 aa8.44□□□□□ -1.06
CMSS1-207ENST00000494412 TMEM132AQ24JP5 1023 aa8.43□□□□□ -1.06
CMSS1-207ENST00000494412 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
CMSS1-207ENST00000494412 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
CMSS1-207ENST00000494412 LMOD2Q6P5Q4 547 aa8.42□□□□□ -1.06
CMSS1-207ENST00000494412 KIF3CO14782 793 aa8.4□□□□□ -1.06
CMSS1-207ENST00000494412 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.4□□□□□ -1.06
CMSS1-207ENST00000494412 TMC2Q8TDI7 906 aa8.4□□□□□ -1.06
CMSS1-207ENST00000494412 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
CMSS1-207ENST00000494412 LARP6Q9BRS8 491 aaKnown RBP8.39□□□□□ -1.07
CMSS1-207ENST00000494412 ERICH6Q7L0X2 663 aa8.38□□□□□ -1.07
CMSS1-207ENST00000494412 GPHNQ9NQX3 736 aaPredicted RBP8.38□□□□□ -1.07
CMSS1-207ENST00000494412 PDE4AP27815 886 aa8.37□□□□□ -1.07
CMSS1-207ENST00000494412 DSG2Q14126 1118 aa8.37□□□□□ -1.07
CMSS1-207ENST00000494412 FOXK1P85037 733 aa8.33□□□□□ -1.08
CMSS1-207ENST00000494412 PPP1R15BQ5SWA1 713 aa8.33□□□□□ -1.08
CMSS1-207ENST00000494412 PLPP6Q8IY26 295 aa8.33□□□□□ -1.08
CMSS1-207ENST00000494412 DDX27Q96GQ7 796 aaKnown RBP8.33□□□□□ -1.08
CMSS1-207ENST00000494412 MFSD10Q14728 455 aa8.32□□□□□ -1.08
CMSS1-207ENST00000494412 C14orf37Q86TY3 774 aa8.31□□□□□ -1.08
CMSS1-207ENST00000494412 ARHGEF1Q92888 912 aaKnown RBP8.31□□□□□ -1.08
CMSS1-207ENST00000494412 HOXB3P14651 431 aaPredicted RBP8.3□□□□□ -1.08
CMSS1-207ENST00000494412 E2F4Q16254 413 aa8.29□□□□□ -1.08
CMSS1-207ENST00000494412 BRPF1P55201 1214 aaPredicted RBP8.28□□□□□ -1.08
CMSS1-207ENST00000494412 ZC3H15Q8WU90 426 aaKnown RBP8.27□□□□□ -1.09
CMSS1-207ENST00000494412 FAM163AQ96GL9 167 aaPredicted RBP8.26□□□□□ -1.09
CMSS1-207ENST00000494412 SEMA3EO15041 775 aa8.25□□□□□ -1.09
CMSS1-207ENST00000494412 NEUROD2Q15784 382 aa8.25□□□□□ -1.09
CMSS1-207ENST00000494412 UPF1Q92900 1129 aaKnown RBP eCLIP8.25□□□□□ -1.09
CMSS1-207ENST00000494412 EMILIN3Q9NT22 766 aa8.25□□□□□ -1.09
CMSS1-207ENST00000494412 SNPHO15079 494 aa8.24□□□□□ -1.09
CMSS1-207ENST00000494412 TESPA1A2RU30 521 aaPredicted RBP8.23□□□□□ -1.09
CMSS1-207ENST00000494412 CAMK2BQ13554 666 aa8.23□□□□□ -1.09
CMSS1-207ENST00000494412 DOK7Q18PE1 504 aa8.23□□□□□ -1.09
CMSS1-207ENST00000494412 KHSRPQ92945 711 aaKnown RBP eCLIP8.23□□□□□ -1.09
CMSS1-207ENST00000494412 ARXQ96QS3 562 aa8.23□□□□□ -1.09
CMSS1-207ENST00000494412 SLC24A3Q9HC58 644 aa8.23□□□□□ -1.09
CMSS1-207ENST00000494412 ST18O60284 1047 aa8.22□□□□□ -1.09
CMSS1-207ENST00000494412 SLC34A2O95436 690 aa8.22□□□□□ -1.09
CMSS1-207ENST00000494412 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
CMSS1-207ENST00000494412 ZNF710Q8N1W2 664 aa8.22□□□□□ -1.09
CMSS1-207ENST00000494412 ARSIQ5FYB1 569 aa8.21□□□□□ -1.1
CMSS1-207ENST00000494412 PCDHGA4Q9Y5G9 962 aa8.21□□□□□ -1.1
CMSS1-207ENST00000494412 GPR153Q6NV75 609 aa8.2□□□□□ -1.1
CMSS1-207ENST00000494412 OXER1Q8TDS5 423 aa8.2□□□□□ -1.1
CMSS1-207ENST00000494412 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
CMSS1-207ENST00000494412 DPYSL4O14531 572 aa8.18□□□□□ -1.1
CMSS1-207ENST00000494412 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
CMSS1-207ENST00000494412 SMYD5Q6GMV2 418 aa8.18□□□□□ -1.1
CMSS1-207ENST00000494412 NUDT7P0C024 238 aa8.17□□□□□ -1.1
CMSS1-207ENST00000494412 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
CMSS1-207ENST00000494412 HOXB1P14653 301 aaPredicted RBP8.16□□□□□ -1.1
CMSS1-207ENST00000494412 MAP3K9P80192 1104 aa8.16□□□□□ -1.1
CMSS1-207ENST00000494412 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.1
CMSS1-207ENST00000494412 KDM4FA0A1W2PPD8 638 aa8.14□□□□□ -1.11
CMSS1-207ENST00000494412 TBC1D12O60347 775 aa8.14□□□□□ -1.11
CMSS1-207ENST00000494412 ZMYND10O75800 440 aa8.14□□□□□ -1.11
CMSS1-207ENST00000494412 EVI5O60447 810 aa8.12□□□□□ -1.11
CMSS1-207ENST00000494412 EMP3P54852 163 aa8.11□□□□□ -1.11
CMSS1-207ENST00000494412 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
CMSS1-207ENST00000494412 PLSCR2Q9NRY7 297 aa8.11□□□□□ -1.11
CMSS1-207ENST00000494412 POTEMA6NI47 508 aa8.1□□□□□ -1.11
CMSS1-207ENST00000494412 BARGINQ6ZT62 677 aa8.1□□□□□ -1.11
CMSS1-207ENST00000494412 LHX6Q9UPM6 363 aa8.1□□□□□ -1.11
CMSS1-207ENST00000494412 ARIH1Q9Y4X5 557 aaPredicted RBP8.1□□□□□ -1.11
CMSS1-207ENST00000494412 POTEB3A0JP26 581 aa8.09□□□□□ -1.11
CMSS1-207ENST00000494412 POTEBQ6S5H4 581 aa8.09□□□□□ -1.11
CMSS1-207ENST00000494412 FAM205CA6NFA0 338 aa8.08□□□□□ -1.12
CMSS1-207ENST00000494412 PDIA6Q15084 440 aa8.08□□□□□ -1.12
CMSS1-207ENST00000494412 POTEGQ6S5H5 508 aa8.08□□□□□ -1.12
CMSS1-207ENST00000494412 ERBB3P21860 1342 aa8.07□□□□□ -1.12
CMSS1-207ENST00000494412 ZNF316A6NFI3 1004 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-207ENST00000494412 SUPT5HO00267 1087 aaKnown RBP8.07□□□□□ -1.12
CMSS1-207ENST00000494412 GPIHBP1Q8IV16 184 aa8.07□□□□□ -1.12
CMSS1-207ENST00000494412 ANO8Q9HCE9 1232 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-207ENST00000494412 VARS2Q5ST30 1063 aaKnown RBP8.06□□□□□ -1.12
CMSS1-207ENST00000494412 RBM26Q5T8P6 1007 aaKnown RBP8.06□□□□□ -1.12
CMSS1-207ENST00000494412 KRI1Q8N9T8 703 aaKnown RBP8.06□□□□□ -1.12
CMSS1-207ENST00000494412 AK7Q96M32 723 aa8.06□□□□□ -1.12
CMSS1-207ENST00000494412 SPDYE16A6NNV3 312 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-207ENST00000494412 MLLT3P42568 568 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-207ENST00000494412 DDX12PQ92771 950 aa8.05□□□□□ -1.12
CMSS1-207ENST00000494412 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
CMSS1-207ENST00000494412 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
CMSS1-207ENST00000494412 GPBP1L1Q9HC44 474 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms