RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
PHACTR4-204ENST00000493669 ADGBQ8N7X0 1667 aa15.61■□□□□ 0.09
PHACTR4-204ENST00000493669 CROCC2H7BZ55 1655 aa15.61■□□□□ 0.09
PHACTR4-204ENST00000493669 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
PHACTR4-204ENST00000493669 CDC42BPAQ5VT25 1732 aa15.61■□□□□ 0.09
PHACTR4-204ENST00000493669 ADGRL2O95490 1459 aa15.6■□□□□ 0.09
PHACTR4-204ENST00000493669 SIN3AQ96ST3 1273 aa15.6■□□□□ 0.09
PHACTR4-204ENST00000493669 ABCC2Q92887 1545 aa15.59■□□□□ 0.09
PHACTR4-204ENST00000493669 KDM6BO15054 1643 aa15.58■□□□□ 0.08
PHACTR4-204ENST00000493669 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
PHACTR4-204ENST00000493669 SHANK2Q9UPX8 1470 aa15.57■□□□□ 0.08
PHACTR4-204ENST00000493669 NEUROD1Q13562 356 aa15.57■□□□□ 0.08
PHACTR4-204ENST00000493669 TONSLQ96HA7 1378 aa15.55■□□□□ 0.08
PHACTR4-204ENST00000493669 UHRF1BP1LA0JNW5 1464 aa15.55■□□□□ 0.08
PHACTR4-204ENST00000493669 ERCC6L2Q5T890 1561 aa15.54■□□□□ 0.08
PHACTR4-204ENST00000493669 NCOA1Q15788 1441 aa15.54■□□□□ 0.08
PHACTR4-204ENST00000493669 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
PHACTR4-204ENST00000493669 DENND4BO75064 1496 aaPredicted RBP15.54■□□□□ 0.08
PHACTR4-204ENST00000493669 ARHGEF5Q12774 1597 aa15.53■□□□□ 0.08
PHACTR4-204ENST00000493669 PREX2Q70Z35 1606 aa15.53■□□□□ 0.08
PHACTR4-204ENST00000493669 ANKRD30AQ9BXX3 1397 aa15.52■□□□□ 0.07
PHACTR4-204ENST00000493669 TRIM52Q96A61 297 aa15.52■□□□□ 0.07
PHACTR4-204ENST00000493669 MPHOSPH9Q99550 1183 aa15.5■□□□□ 0.07
PHACTR4-204ENST00000493669 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
PHACTR4-204ENST00000493669 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
PHACTR4-204ENST00000493669 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
PHACTR4-204ENST00000493669 C9orf84Q5VXU9 1444 aa15.47■□□□□ 0.07
PHACTR4-204ENST00000493669 RSPH4AQ5TD94 716 aa15.47■□□□□ 0.07
PHACTR4-204ENST00000493669 MIER1Q8N108 512 aa15.46■□□□□ 0.07
PHACTR4-204ENST00000493669 MBD5Q9P267 1494 aa15.46■□□□□ 0.07
PHACTR4-204ENST00000493669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.46■□□□□ 0.07
PHACTR4-204ENST00000493669 SAMD9LQ8IVG5 1584 aa15.46■□□□□ 0.06
PHACTR4-204ENST00000493669 ZCCHC11Q5TAX3 1644 aaKnown RBP15.45■□□□□ 0.06
PHACTR4-204ENST00000493669 CCDC141Q6ZP82 1450 aa15.45■□□□□ 0.06
PHACTR4-204ENST00000493669 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
PHACTR4-204ENST00000493669 PLEKHH2Q8IVE3 1493 aa15.44■□□□□ 0.06
PHACTR4-204ENST00000493669 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
PHACTR4-204ENST00000493669 MYO5CQ9NQX4 1742 aa15.44■□□□□ 0.06
PHACTR4-204ENST00000493669 ANKRD30BQ9BXX2 1392 aa15.44■□□□□ 0.06
PHACTR4-204ENST00000493669 ANKRD50Q9ULJ7 1429 aa15.44■□□□□ 0.06
PHACTR4-204ENST00000493669 PZPP20742 1482 aa15.43■□□□□ 0.06
PHACTR4-204ENST00000493669 TSPY4P0CV99 314 aa15.43■□□□□ 0.06
PHACTR4-204ENST00000493669 TSPY10P0CW01 314 aa15.43■□□□□ 0.06
PHACTR4-204ENST00000493669 MAST1Q9Y2H9 1570 aa15.42■□□□□ 0.06
PHACTR4-204ENST00000493669 RPRD2Q5VT52 1461 aaKnown RBP15.42■□□□□ 0.06
PHACTR4-204ENST00000493669 KDM5DQ9BY66 1539 aa15.42■□□□□ 0.06
PHACTR4-204ENST00000493669 KIAA1107Q9UPP5 1409 aa15.41■□□□□ 0.06
PHACTR4-204ENST00000493669 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
PHACTR4-204ENST00000493669 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
PHACTR4-204ENST00000493669 ARAP3Q8WWN8 1544 aa15.38■□□□□ 0.05
PHACTR4-204ENST00000493669 KIF15Q9NS87 1388 aa15.37■□□□□ 0.05
PHACTR4-204ENST00000493669 SYCP2Q9BX26 1530 aa15.37■□□□□ 0.05
PHACTR4-204ENST00000493669 PLCH2O75038 1416 aa15.37■□□□□ 0.05
PHACTR4-204ENST00000493669 HNRNPMP52272 730 aaKnown RBP eCLIP15.36■□□□□ 0.052e-7■■■■□ 22
PHACTR4-204ENST00000493669 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
PHACTR4-204ENST00000493669 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
PHACTR4-204ENST00000493669 FOXD1Q16676 465 aa15.32■□□□□ 0.04
PHACTR4-204ENST00000493669 ABCC1P33527 1531 aa15.31■□□□□ 0.04
PHACTR4-204ENST00000493669 WDR7Q9Y4E6 1490 aa15.31■□□□□ 0.04
PHACTR4-204ENST00000493669 EFCAB2Q5VUJ9 269 aa15.31■□□□□ 0.04
PHACTR4-204ENST00000493669 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
PHACTR4-204ENST00000493669 NUP155O75694 1391 aa15.31■□□□□ 0.04
PHACTR4-204ENST00000493669 UNC13BO14795 1591 aa15.29■□□□□ 0.04
PHACTR4-204ENST00000493669 KCNH8Q96L42 1107 aa15.29■□□□□ 0.04
PHACTR4-204ENST00000493669 PKD2Q13563 968 aa15.28■□□□□ 0.04
PHACTR4-204ENST00000493669 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
PHACTR4-204ENST00000493669 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
PHACTR4-204ENST00000493669 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.04
PHACTR4-204ENST00000493669 ABCA9Q8IUA7 1624 aa15.27■□□□□ 0.03
PHACTR4-204ENST00000493669 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
PHACTR4-204ENST00000493669 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
PHACTR4-204ENST00000493669 RTEL1-TNFRSF6BF6WH68 1400 aa15.24■□□□□ 0.03
PHACTR4-204ENST00000493669 EIF4G2P78344 907 aaKnown RBP eCLIP15.24■□□□□ 0.03
PHACTR4-204ENST00000493669 DDX10Q13206 875 aaKnown RBP15.24■□□□□ 0.03
PHACTR4-204ENST00000493669 MAGI2Q86UL8 1455 aa15.23■□□□□ 0.03
PHACTR4-204ENST00000493669 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
PHACTR4-204ENST00000493669 IQGAP3Q86VI3 1631 aa15.23■□□□□ 0.03
PHACTR4-204ENST00000493669 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
PHACTR4-204ENST00000493669 HSPA5P11021 654 aaKnown RBP15.21■□□□□ 0.03
PHACTR4-204ENST00000493669 ASXL2Q76L83 1435 aa15.2■□□□□ 0.02
PHACTR4-204ENST00000493669 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
PHACTR4-204ENST00000493669 HIRIP3Q9BW71 556 aaPredicted RBP15.2■□□□□ 0.02
PHACTR4-204ENST00000493669 TRAPPC8Q9Y2L5 1435 aa15.2■□□□□ 0.02
PHACTR4-204ENST00000493669 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
PHACTR4-204ENST00000493669 ZFYVE16Q7Z3T8 1539 aa15.18■□□□□ 0.02
PHACTR4-204ENST00000493669 FANCAO15360 1455 aa15.18■□□□□ 0.02
PHACTR4-204ENST00000493669 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
PHACTR4-204ENST00000493669 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
PHACTR4-204ENST00000493669 INO80Q9ULG1 1556 aaPredicted RBP15.16■□□□□ 0.02
PHACTR4-204ENST00000493669 ATP10AO60312 1499 aa15.15■□□□□ 0.02
PHACTR4-204ENST00000493669 SPAG9O60271 1321 aaKnown RBP15.15■□□□□ 0.02
PHACTR4-204ENST00000493669 ANP32CO43423 234 aa15.15■□□□□ 0.02
PHACTR4-204ENST00000493669 POLR1AO95602 1720 aaPredicted RBP15.15■□□□□ 0.02
PHACTR4-204ENST00000493669 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
PHACTR4-204ENST00000493669 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
PHACTR4-204ENST00000493669 CFAP74Q9C0B2 1584 aa15.13■□□□□ 0.01
PHACTR4-204ENST00000493669 CCDC144AA2RUR9 1427 aa15.13■□□□□ 0.01
PHACTR4-204ENST00000493669 ADGRL1O94910 1474 aa15.13■□□□□ 0.01
PHACTR4-204ENST00000493669 ATP7AQ04656 1500 aa15.13■□□□□ 0.01
PHACTR4-204ENST00000493669 WASHC2AQ641Q2 1341 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms